Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
391
datasets available to search
ShareScore release 0.9.0
Dataset results
391 results for “Spatial analysis”
Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [WES]
GEO Series GSE144237. Homo sapiens. 18 samples. Type: Other.
Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.
GEO Series GSE250636. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section
GEO Series GSE232910. Mus musculus; Homo sapiens. 19 samples. Type: Expression profiling by high throughput sequencing; Other.
Cosmx Spatial Analysis of whole brain slices and ventral pallidum
GEO Series GSE292791. Mus musculus. 1 samples. Type: Other.
Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner
GEO Series GSE269171. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Multi-omics analysis of spatially distinct stromal cells reveals tumor-induced O-glycosylation of the CDK4-pRB axis in fibroblasts at the invasive tumor edge
GEO Series GSE186235. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
Spatial analysis of microRNA regulation at defined tumor hypoxia levels reveals biological traits of aggressive prostate cancer
GEO Series GSE259218. Homo sapiens. 48 samples. Type: Expression profiling by array.
Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys [spatial transcriptomics]
GEO Series GSE233512. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptome analysis of gastric cancer which GAN-KP transplanted C57BL/6J mouse
GEO Series GSE186290. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis
GEO Series GSE299165. Homo sapiens. 3 samples. Type: Other.
Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockad
GEO Series GSE300293. Mus musculus. 19 samples. Type: Other.
Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium]
GEO Series GSE273557. Homo sapiens. 4 samples. Type: Other.
High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis [scRNA-seq and Visium]
GEO Series GSE243275. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Integrated single-cell RNA sequencing and spatial transcriptomics analysis reveals the tumor microenvironment in patients with endometrial cancer responding to anti-PD-1 treatment
GEO Series GSE251923. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer
GEO Series GSE263920. Homo sapiens. 8 samples. Type: Other.
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues]
GEO Series GSE103154. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain
GEO Series GSE182127. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
Spatially resolved single-cell analysis uncovers protein kinase Cδ-expressing microglia with anti-tumor activity in glioblastoma [Spatial Transcriptomics]
GEO Series GSE298689. Mus musculus. 1 samples. Type: Other.
Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial
GEO Series GSE289170. Mus musculus. 6 samples. Type: Other.
Tongue immune compartment analysis reveals spatial macrophage heterogeneity [bulk RNA-Seq]
GEO Series GSE205157. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.