Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial Transcriptomic Profiling of Male Germ Cells from Control and Cbfb cKO mice
GEO Series GSE244586. Mus musculus. 54 samples. Type: Expression profiling by high throughput sequencing; Other.
SPATIAL TRANSCRIPTOMICS IDENTIFY HOMOLOGOUS MECHANISMS IN THE PATHOPHYSIOLOGY OF HUMAN AND E4FAD MOUSE CEREBRAL MICROBLEEDS
GEO Series GSE288162. Mus musculus; Homo sapiens. 31 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer
GEO Series GSE225857. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics]
GEO Series GSE289745. Homo sapiens. 11 samples. Type: Other.
Spatial transcriptomics unveils ZBTB11 as a regulator of cardiomyocyte degeneration in cardiomyopathy
GEO Series GSE114770. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion
GEO Series GSE300380. Homo sapiens. 7 samples. Type: Other.
Spatially heterogeneous choroid plexus transcriptomes encode positional identity and contribute to regional cerebrospinal fluid production
GEO Series GSE66312. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of autoimmune alopecia
GEO Series GSE227632. Homo sapiens. 2 samples. Type: Other.
Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys
GEO Series GSE233513. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptomics and CUT&RUN of the aging mouse brain reveal origins of inflammation in the white matter
GEO Series GSE284202. Mus musculus. 70 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma
GEO Series GSE236963. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
GENE EXPRESSION WITHIN A HUMAN CHOROIDAL NEOVASCULAR MEMBRANE USING SPATIAL TRANSCRIPTOMICS
GEO Series GSE234047. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium]
GEO Series GSE307990. Homo sapiens. 31 samples. Type: Other.
Spatial transcriptomic maps of whole mouse embryos
GEO Series GSE197353. Mus musculus. 23 samples. Type: Expression profiling by high throughput sequencing; Other.
Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics]
GEO Series GSE269695. Homo sapiens. 5 samples. Type: Other.
Spatially Resolved Transcriptomic Signatures of Hippocampal Subregions and Arc-Expressing Ensembles in Active Place Avoidance Memory [Spatial Transcriptomics]
GEO Series GSE279273. Mus musculus. 2 samples. Type: Other.
Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2]
GEO Series GSE244803. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale
GEO Series GSE263333. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [mouse]
GEO Series GSE299195. Mus musculus. 1 samples. Type: Other.
Spatial Transcriptomic Analysis Of Primary And Metastatic Pancreatic Cancers Highlights Tumor Microenvironmental Heterogeneity
GEO Series GSE272362. Homo sapiens. 30 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.