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249 results for “plant pathogen”

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geo16/100

Global transcriptome of Arabidopsis plants (Col-0, Rld2 and Shahdara genotypes) inoculated by the fungal pathogen Sclerotinia sclerotiorum following temperate, mediterranean and continental acclimatio

GEO Series GSE272240. Arabidopsis thaliana. 54 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2024View details →
geo16/100

Arabidopsis CURLY LEAF functions in leaf immunity against fungal pathogens by concomitantly repressing SEPALLATA3 and activating plant defensins

GEO Series GSE157774. Arabidopsis thaliana. 8 samples. Type: Expression profiling by array.

openGEO-OpenSep 2023View details →
geo16/100

Non-pathogenic leaf-colonising bacteria elicit plant immune responses in a colonisation density-dependent manner

GEO Series GSE232248. Arabidopsis thaliana. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo16/100

Volatile compounds emitted by Plant Growth Promoting Fungi Tolypocladium inflatum GT22 alleviates copper and pathogen stress

GEO Series GSE239841. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2024View details →
geo16/100

Adaptive regulation of pathogenic factors by microRNA-like RNA directed mRNA cleavage in plant pathogenic fungus Valsa mali

GEO Series GSE130968. Cytospora mali; Malus domestica. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing; Other.

openGEO-OpenMay 2019View details →
geo16/100

Plant mRNAs move into a fungal pathogen via extracellular vesicles to reduce infection

GEO Series GSE197077. Arabidopsis thaliana; Botrytis cinerea. 15 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenSep 2024View details →
geo12/100

Pathogenic response of Glycine max to the stem parasitic plant Cuscuta

GEO Series GSE51328. Glycine max. 11 samples. Type: Expression profiling by array.

openGEO-OpenJun 2014View details →
geo12/100

Investigating putative RPS4-chromatin associations during Arabidopsis plant disease resistance, using a temperature-inducible system which resembles pathogen-infection

GEO Series GSE40329. Arabidopsis thaliana. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenSep 2017View details →
geo12/100

Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance

GEO Series GSE7124. Phytophthora sojae; Glycine max. 128 samples. Type: Expression profiling by array.

openGEO-OpenNov 2007View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record