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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [CD34-PBMC-invivo-scATAC]
GEO Series GSE148508. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
scATAC-seq over multiple time points of heart development in WT C57Bl6/J embryos and in Tbx1 mutant mice (Tbx1 KO)
GEO Series GSE198561. Mus musculus. 27 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [Patient scATAC-seq]
GEO Series GSE155255. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The latent HIV reservoir in the brain of people with HIV under antiretroviral therapy (scATAC-Seq)
GEO Series GSE221686. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Degradation of Ikaros prevents epigenetic progression of T cell exhaustion in novel antigen-specific assay [scATAC-seq]
GEO Series GSE244162. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromatin dynamics during fibroblast reprogramming to pluripotency [scATAC]
GEO Series GSE242421. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Maternal Asthma During Pregnancy Imprints Fetal Lung Group 2 Innate Lymphoid Cells and Enhances Their Function in Adulthood [scATAC-Seq]
GEO Series GSE262716. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Enhancer reactivation mediates adaptive resistance to FGFR inhibitors in triple-negative breast cancer [scATAC_seq]
GEO Series GSE168026. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Defined cellular reprogramming of androgen receptor-active prostate cancer to neuroendocrine prostate cancer [scATAC-seq]
GEO Series GSE225022. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cyclical macrophage plasticity provides periodic inflammatory and regenerative gene expression programs in cell cycle [scATAC-seq]
GEO Series GSE178524. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Global genome decompaction leads to stochastic activation of gene expression as a first step toward fate commitment in human hematopoietic cells [scATAC-seq]
GEO Series GSE203567. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
High-throughput single-cell mitochondrial DNA genotyping reveals properties of clonal variation in human contexts [CLL-scATAC]
GEO Series GSE142743. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Heritable fetal protection against MLL::ENL-driven leukemogenesis depends on MLL3 [scATAC-seq]
GEO Series GSE291038. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The translational landscape of direct cardiac reprogramming reveals a role of Ybx1 in repressing cardiac fate acquisition [scRNA-seq and scATAC-seq]
GEO Series GSE196125. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell epigenomics identifies a premetastatic regulatory program in lung adenocarcinoma [scATAC-seq]
GEO Series GSE145192. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mutant Kras co-opts a progenitor-derived enhancer network to initiate pancreatic tumorigenesis [scATAC-seq]
GEO Series GSE147726. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
scATAC-seq of Inguinal Adipose Tissue of UCP1-KO and WT mice.
GEO Series GSE174456. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [scATAC-seq]
GEO Series GSE228339. Gallus gallus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
GRNsmile: gene regulatory network inference with a single-cell multi-layer omics approach [scATAC-seq]
GEO Series GSE173458. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single cell analyses reveals a non-canonical EZH2 activity as main driver of RA resistance in PLZF/RARA leukemia [scATAC-seq]
GEO Series GSE181188. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.