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March 2002 surface water phytoplankton productivity for 10 Georgia Coastal Ecosystems LTER sampling sites
Water samples were collected by Niskin bottle or by hand from just beneath the surface during low tide surveys at or near 10 GCE-LTER sampling sites in March 2002. The incorporation of radiolabelled bicarbonate in response to varying levels of illumination was measured using a photosynthetron apparatus. Photosynthesis-irradiance (P-I) curves constructed from these measurements will be used in conjunction with algal biomass and PAR versus depth measurements to estimate instantaneous gross primary production in the water at each GCE sampling site. This study was part of the GCE-LTER hydrographic monitoring program, and will be repeated quarterly.
Surface water DIC, total alkalinity, and pH for the September 2002 through December 2004 Georgia Coastal Ecosystems LTER oceanographic surveys
Surface water samples for total dissolved inorganic carbon (DIC), total alkalinity (TAlk), and pH were collected from the Altamaha River, Doboy Sound, Sapelo River and the Duplin River (anchor station near Marsh Landing) during the Georgia Coastal Ecosystems LTER oceanographic surveys from September 2002 through December 2004. DIC was measured using a custom automated DIC analyzer. Total alkalinity was determined by Gran titration. pH of surface water at stations was measured on board using a glass electrode. This study was part of the GCE oceanographic monitoring program, and will be repeated periodically.
High frequency sediment surface temperature measurements at GCE-LTER study hammock PC_i_29 from 15-Aug-2008 to 24-Sep-2012
Sediment surface temperature was recorded at 5 minute intervals adjacent to 7 groundwater wells installed at the GCE-LTER study hammock PC_i_29 on Sapelo Island, Georgia, from 15-Aug-2008 to 24-Sep-2012. Temperature was measured using Onset Hobo Tidbit temperature loggers that were placed onto the surface of the sediment in shallow PVC enclosures to protect against solar radiation. Data were downloaded from the logger and processed using the manufacturer's software, then imported into MATLAB for post-processing, quality control and documention. Individual data tables were created for each location to minimize file size for analysis, but complete location and deployment information are included in each table to facilitate integration. These data were collected as part of the Georgia Coastal Ecosystems LTER Intensive Hammock Characterization project to illucidate the timing of marsh inundation, and will be used for groundwater modeling studies at two marsh hammocks on Sapelo Island, Georgia.
Soil surface temperature measurements from the GCE-LTER Seawater Addition Long-Term Experiment (SALTEx) Project
SALTEx (Seawater Addition Long-Term Experiment) is a field experiment designed to simulate saltwater intrusion in a tidal freshwater wetland to predict how chronic (Press) and acute (Pulse) salinization will affect this and other tidal freshwater ecosystems. The SALTEx experiment was initiated in 2012 and consists of 31 field plots, each 2.5 m on a side. There are three treatments (Press, Pulse, and Fresh) and two types of controls (with and without sides), each consisting of six replicates. The Press treatment plots receive regular (4 times each week) additions of a mixture of seawater and fresh river water. Pulse plots receive the same mixture of seawater and river water during September and October, which is historically a time of low flow in the river when natural saltwater intrusion occurs. The Fresh treatment plots receive regular additions of fresh river water. Treatment water is added during low tide to facilitate its infiltration into the soil, and all plots are inundated by astronomical tides at high tide. We are measuring soil surface temperature in the plots as one of the response variables for the SALTEx project.
Surface water DIC, total alkalinity, and pH for the March 2001 Georgia Coastal Ecosystems LTER oceanographic survey
Surface water samples for total dissolved inorganic carbon (DIC), total alkalinity (TAlk), and pH were collected from the Altamaha River, Doboy Sound, Sapelo River and the Duplin River (anchor station near Marsh Landing) during March 19-21, 2001. DIC was measured using a custom automated DIC analyzer. Total alkalinity was determined by Gran titration. pH of surface water at stations was measured on board using a glass electrode. This study was part of the GCE oceanographic monitoring program, and will be repeated periodically.
Surface water DIC, total alkalinity, and pH for the June 2001 Georgia Coastal Ecosystems LTER oceanographic survey
Surface water samples for total dissolved inorganic carbon (DIC), total alkalinity (TAlk), and pH were collected from the Altamaha River, Doboy Sound, Sapelo River and the Duplin River (anchor station near Marsh Landing) during June 26-28, 2001. DIC was measured using a custom automated DIC analyzer. Total alkalinity was determined by Gran titration. pH of surface water at stations was measured on board using a glass electrode. This study was part of the GCE oceanographic monitoring program, and will be repeated periodically.
Surface water DIC, total alkalinity, and pH for the October 2001 Georgia Coastal Ecosystems LTER oceanographic survey
Surface water samples for total dissolved inorganic carbon (DIC), total alkalinity (TAlk), and pH were collected from the Altamaha River, Doboy Sound, Sapelo River and the Duplin River (anchor station near Marsh Landing) during October 11-14, 2001. DIC was measured using a custom automated DIC analyzer. Total alkalinity was determined by Gran titration. pH of surface water at stations was measured on board using a glass electrode. This study was part of the GCE oceanographic monitoring program, and will be repeated periodically.
Surface water DIC, total alkalinity, and pH for the November 2001 Georgia Coastal Ecosystems LTER oceanographic survey
Surface water samples for total dissolved inorganic carbon (DIC), total alkalinity (TAlk), and pH were collected from the Altamaha River, Doboy Sound, Sapelo River and the Duplin River (anchor station near Marsh Landing) during November 26-29, 2001. DIC was measured using a custom automated DIC analyzer. Total alkalinity was determined by Gran titration. pH of surface water at stations was measured on board using a glass electrode. This study was part of the GCE oceanographic monitoring program, and will be repeated periodically.
June 2001 surface water bacterial productivity at ten Georgia Coastal Ecosystems LTER sampling sites
Surface water samples were collected during low tide survays near ten Georgia Coastal Ecosystem LTER sampling sites in June, 2001. The incorporation of tritiated leucine in unfiltered samples during one hour incubations was measured using a standard microcentrifuge method to estimate bacterial productivity in each sample. This study was part of the GCE-LTER hydrographic monitoring program, and will be repeated quarterly.
October 2001 surface water bacterial productivity at ten Georgia Coastal Ecosystems LTER sampling sites
Surface water samples were collected during low tide survays near ten Georgia Coastal Ecosystem LTER sampling sites in October, 2001. The incorporation of tritiated leucine in unfiltered samples during one hour incubations was measured using a standard microcentrifuge method to estimate bacterial productivity in each sample. This study was part of the GCE-LTER hydrographic monitoring program, and will be repeated quarterly.
November 2001 surface water bacterial productivity at ten Georgia Coastal Ecosystems LTER sampling sites
Surface water samples were collected during low tide survays near ten Georgia Coastal Ecosystem LTER sampling sites in November, 2001. The incorporation of tritiated leucine in unfiltered samples during one hour incubations was measured using a standard microcentrifuge method to estimate bacterial productivity in each sample. This study was part of the GCE-LTER hydrographic monitoring program, and will be repeated quarterly.
March 2002 surface water bacterial productivity at ten Georgia Coastal Ecosystems LTER sampling sites
Surface water samples were collected during low tide survays near ten Georgia Coastal Ecosystem LTER sampling sites in March, 2002. The incorporation of tritiated leucine in unfiltered samples during one hour incubations was measured using a standard microcentrifuge method to estimate bacterial productivity in each sample. This study was part of the GCE-LTER hydrographic monitoring program, and will be repeated quarterly.
September 2002 surface water bacterial productivity at ten Georgia Coastal Ecosystems LTER sampling sites
Surface water samples were collected during low tide survays near ten Georgia Coastal Ecosystem LTER sampling sites in September, 2002. The incorporation of tritiated leucine in unfiltered samples during one hour incubations was measured using a standard microcentrifuge method to estimate bacterial productivity in each sample. This study was part of the GCE-LTER hydrographic monitoring program, and will be repeated quarterly.
NPL01 Litterfall inputs to soil surface in watersheds with different fire treatments
Litter falling to the soil surface of tallgrass prairie was measured using 5 cm x 100 cm litterfall troughs. Mass, nitrogen, and phosphorus content were measured monthly or seasonally. Variables of interest include burning frequency and soil type.
MCR LTER: Data from Duvall, Rosman and Hench, in review. Representation of coral reef roughness using obstacle and surface-based approaches, submitted to JGR: Oceans
This archive contains natural coral reef topography data from the northern coast of Mo’orea, French Polynesia. These data were used to compute reef roughness density using obstacle- and surface-based estimates and models, and to compare the two approaches for representing reef topography. Primary support for this product came from the National Science Foundation Physical Oceanography program (OCE-1435530 and OCE-1435133), and as well as Duke University and the University of North Carolina at Chapel Hill. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2019). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
Minneapolis-St. Paul Metro Area Lakes Surface Water Quality Characteristics
Urban lakes are heavily impacted by human activities and climate variability, and they provide many ecosystem services to residents. The MSP LTER program is studying long term changes in urban lake water quality, ecology and management as part of our long term studies of urban environments. The goal of this dataset is to understand how land-use change, management, and climate have impacted urban lake biogeochemistry over time. This dataset includes parameters characterizing the long term (> 5 years) surface water quality and chemistry of 294 lakes and ponds in the Minneapolis-Saint Paul Seven County Metropolitan Area, Minnesota, USA. The dataset draws from data publicly available through the Minnesota Pollution Control Agency and data provided by individual agencies, park districts and cities. The dataset is distinct from other lake datasets because it is curated to only report a single value per lake x date x parameter, minimizing the amount of data manipulation needed before use in statistical analyses. All data come from the top two meters of the water column. In the case of multiple spatial measurements on a single lake or multiple agencies sampling the same lake on the same day, chemistry data were averaged to generate a single value. For Secchi data, the deepest reported observation on a given lake x date was used. Parameters: total phosphorus, total nitrogen, total Kjeldahl nitrogen, nitrate, nitrite, nitrate + nitrite (NOx), ammonium, chlorophyll a (corrected and not corrected for pheophytin), specific conductivity, chloride, and Secchi depth. These waterbodies are identified by their DNR Division of Water (DOW) number with minor alterations for subbasin identification. This dataset does not comprehensively represent all lentic waterbodies that have substantial water quality data in the metro area, and some included waterbodies may be considered wetlands according to state classifications. The data brought together in this database has undergone QAQC by the
Saddle catchment Distributed Hydrology Soil Vegetation Model Simulation (DHSVM) surface variable outputs (SWE, snowmelt, streamflow, soil moisture), 2 meter, 2000-2019.
The Saddle Catchment of the Niwot Ridge LTER is a densely observed, high elevation site that is ideal for hydrological model simulation and calibration. The files produced are the result of a calibration of the Distributed Hydrology Soil Vegetation model (DHSVM) using observationally based states and forcings. Input state files of vegetation, soil properties, shading, and elevation were generated using ground and satellite observations, which, in the case of coarse-resolution or point scale observations, were then interpolated to match the high resolution of the model (2-meter grid cells). Temporally continuous meteorological forcings at the hourly time-step were used to force the model to produce an hourly simulation of the surface and subsurface hydrology within the Saddle catchment. DHSVM was calibrated to effectively reproduce the annual cycle (r^2) and total volume (percent bias) of observed runoff using observations of streamflow at the outflow pour point of the Saddle Catchment from 2001-2019. Calibrated parameters include the lateral conductivity of soil types, exponential decrease of soil conductivity, snow roughness, the snow melting temperature threshold, and the vertical conductivity of the soils. The resulting simulation generated spatially distributed time series of the snow water equivalent, snow melt, precipitation, total evapotranspiration, potential evapotranspiration, and a time-series of the total runoff generated at the outflow pour-point of the Saddle catchment. This data package contains the spatially distributed time series of snow water equivalent, snow melt, and runoff, as well as the model configuration file. Outputs of precipitation, total evapotranspiration, actual evapotranspiration, as well as model inputs are archived separately on the Environmental Data Initiative.
Surface temperature mapped from thermal infrared survey from UAV campaign at Niwot Ridge, 2017.
Data collected as part of unmanned aerial vehicle (UAV)/drone campaign during Summer 2017. Investigating snow depth variability and spatiotemporal variations and controls on vegetation productivity within the Niwot Ridge LTER Saddle Catchment. Surface temperature of Niwot Ridge saddle was mapped from thermal infrared survey on June 21, July 11, 18, 25, and August 14, 2017.
Surface and porewater chemistry and sulfur stable isotpes for alpine and subalpine wetland sites, 2021.
To understand patterns in aqueous biogeochemistry of wetlands at Niwot Ridge, samples were collected and analyzed for dissolved anions and stable isotopes of sulfur in 2021. Samples were collected from eight wetland sites representing three wetland types, from the Saddle into the subalpine. At each site, tension lysimeters were placed at visible surface inflow and outflow paths to collect porewater. Water samples were collected from the tension lysimeters and surface pools during four time points through the summer season. Water samples were measured for a suite of dissolved anions using ion chromatography, including dissolved chloride, nitrate, and sulfate. Samples were also measured for dissolved organic carbon. Sulfur from one surface water sample from each site at each time point was precipitated as barium sulfate, and precipitations were analyzed for stable sulfur isotope ratio (δ^34S-SO4^2-) at the Center for Stable Isotope Biogeochemistry at the University of California, Berkeley. Data was used in conjunction with soil biogeochemistry data from 2020 to evaluate patterns in reactants among wetland types.
PIE LTER, marsh surface marker horizon measurements at each Surface Elevation Table (SET) site, Rowley, MA.
Marker horizon depth measurements at each Surface Elevation Table (SET) site. Marker horizons are commonly used in conjunction with the SET. Marker horizons measure vertical accretion which predominantly incorporates surface processes.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.