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FIGURE 8 in Cryptic diversity of stygobiotic shrimp genus Xiphocaridinella Sadowsky, 1930 (Crustacea: Decapoda: Atyidae): the first case of species co-occurrence in the same cave system in the Western Caucasus
FIGURE 8. Alive coloration of troglobiotic shrimp Xiphocaridinella ablaskiri (Birštein, 1939) from Otap Cave (=Golova Otapa) (a, b) and Samshitovaya Cave (c, d): a–c—female, d, e—male ().
FIGURE 7 in Cryptic diversity of stygobiotic shrimp genus Xiphocaridinella Sadowsky, 1930 (Crustacea: Decapoda: Atyidae): the first case of species co-occurrence in the same cave system in the Western Caucasus
FIGURE 7. Dactyli and distal part of propodUs of pereiopod III of troglobiotic shrimp Xiphocaridinella ablaskiri (Birštein, 1939) from Otap Cave (=Golova Otapa) in females (a) and males (b).
FIGURE 3 in Cryptic diversity of stygobiotic shrimp genus Xiphocaridinella Sadowsky, 1930 (Crustacea: Decapoda: Atyidae): the first case of species co-occurrence in the same cave system in the Western Caucasus
FIGURE 3. MaximUm-Likelihood and NeighboUr-Joining phylogenetic reconstrUction based on COI mtDNA gene marker of stUdied Western CaUcasian Xiphocaridinella species. Dinaric Troglocaris anophthalmus (Kollar, 1848) (FJ426022) is Used as an oUtgroUp. ValUes at major nodes indicate bootstrap sUpport.
FIGURE 6 in Cryptic diversity of stygobiotic shrimp genus Xiphocaridinella Sadowsky, 1930 (Crustacea: Decapoda: Atyidae): the first case of species co-occurrence in the same cave system in the Western Caucasus
FIGURE 6. RostrUm and front of carapace of troglobiotic shrimp Xiphocaridinella ablaskiri (Birštein, 1939) from Otap Cave (=Golova Otapa), female (a, c, e, f), male (c, d, g): a, c—pereiopod I; b, d—pereiopod II; e—pereiopod III; f—pereiopod IV; g—pereiopod V.
FIGURE 2 in Cryptic diversity of stygobiotic shrimp genus Xiphocaridinella Sadowsky, 1930 (Crustacea: Decapoda: Atyidae): the first case of species co-occurrence in the same cave system in the Western Caucasus
FIGURE 2. Phylogenetic UPGMA reconstrUction based on COI mtDNA gene marker of stUdied Western CaUcasian Xiphocaridinella species and Dinaric Troglocaris anophthalmus (Kollar, 1848) (FJ426022) as an oUtgroUp.
FIGURE 4 in Cryptic diversity of stygobiotic shrimp genus Xiphocaridinella Sadowsky, 1930 (Crustacea: Decapoda: Atyidae): the first case of species co-occurrence in the same cave system in the Western Caucasus
FIGURE 4. RostrUm and front of carapace of troglobiotic shrimp Xiphocaridinella ablaskiri (Birštein, 1939) from Otap Cave (=Golova Otapa).
FIGURE 5 in Cryptic diversity of stygobiotic shrimp genus Xiphocaridinella Sadowsky, 1930 (Crustacea: Decapoda: Atyidae): the first case of species co-occurrence in the same cave system in the Western Caucasus
FIGURE 5. RostrUm and front of carapace of troglobiotic shrimp Xiphocaridinella ablaskiri (Birštein, 1939) from Otap Cave (=Golova Otapa), female (a–c), male (d, e): a, b—front of carapace, dorsal view; c—telson; d—pleopod I; e—pleopod II.
Supplementary material 3 from: Ordynets A, Scherf D, Pansegrau F, Denecke J, Lysenko L, Larsson K-H, Langer E (2018) Short-spored Subulicystidium (Trechisporales, Basidiomycota): high morphological diversity and only partly clear species boundaries. MycoKeys 35: 41-99. https://doi.org/10.3897/mycokeys.35.25678
Basidiospore size ranges of 67 Subulicystidium specimens which were sequenced or represent important historical collections : Explanation note: For the parameters of basidiospore length (L), width (W) and length to width ratio (Q), the following values are presented: minimal value, 5% data quantile, mean, 95% data quantile and maximum. Minimum and maximum do not consider outliers which were found for some specimens in raw data (see Materials and methods for details of excluding outliers).
Supplementary material 2 from: Ordynets A, Scherf D, Pansegrau F, Denecke J, Lysenko L, Larsson K-H, Langer E (2018) Short-spored Subulicystidium (Trechisporales, Basidiomycota): high morphological diversity and only partly clear species boundaries. MycoKeys 35: 41-99. https://doi.org/10.3897/mycokeys.35.25678
Measurements of 2840 basidiospores from 67 Subulicystidium specimens which were sequenced or represent important historical collections : Explanation note: Each row contains data on length (L_sp), width (W_sp) and length to width ratio (Q_sp) of a single basidiospore and information on specimen and species from which the basidiospore was measured is provided in separate columns. Dataset does not contain outliers which were found for some specimens in raw data (see Materials and methods for details of excluding outliers). In the case of S. brachysporum, the capital "B" following epithet means morphological species concept following Boidin and Gilles (1988), while "T" means the species as described by Talbot (1958).
Supplementary material 1 from: Ordynets A, Scherf D, Pansegrau F, Denecke J, Lysenko L, Larsson K-H, Langer E (2018) Short-spored Subulicystidium (Trechisporales, Basidiomycota): high morphological diversity and only partly clear species boundaries. MycoKeys 35: 41-99. https://doi.org/10.3897/mycokeys.35.25678
Detailed data on 144 specimens of Subulicystidium used in the study : Explanation note: Specimens for which coordinates were available on herbarium labels or from field notes contain "gps" in the column "COORD_source". Specimens for which coordinates were estimated from the map web sources (see Materials and Methods) are marked with the word "map".
Supplementary material 4 from: Ordynets A, Scherf D, Pansegrau F, Denecke J, Lysenko L, Larsson K-H, Langer E (2018) Short-spored Subulicystidium (Trechisporales, Basidiomycota): high morphological diversity and only partly clear species boundaries. MycoKeys 35: 41-99. https://doi.org/10.3897/mycokeys.35.25678
Basidiospore size ranges of Subulicystidium species included in the study : Explanation note: Calculations are based on a set of 67 specimens which were sequenced or represent important historical collections. For the parameters of basidiospore length (L), width (W) and length to width ratio (Q), the following values are presented: minimal value, 5% data quantile, mean, 95% data quantile and maximum. Minimum and maximum do not consider outliers which were found for some specimens in raw data (see Materials and methods for details of excluding outliers). Calculations were provided separately for the type specimens (of S. meridense and S. nikau), as well as for the collection as S. boidinii LY 11247 which was used to propose "Subulicystidium allantosporum ad interim" (Boidin and Gilles 1988). In S. brachysporum, the capital "B" following epithet means morphological species concept following Boidin and Gilles (1988), while "T" means the species as described by Talbot (1958).
Supplementary material 5 from: Korhonen A, Seelan JSS, Miettinen O (2018) Cryptic species diversity in polypores: Skeletocutis nivea species complex. MycoKeys 36: 45-82. https://doi.org/10.3897/mycokeys.36.27002
Distribution maps : Explanation note: Collection localities of specimens included in this study, indicating the approximate species distributions of the Skeletocutis nivea complex (A) in Europe and Western Asia, (B) in East Asia, Indomalaya and Australasia and (C) in North America.
Supplementary material 1 from: Korhonen A, Seelan JSS, Miettinen O (2018) Cryptic species diversity in polypores: Skeletocutis nivea species complex. MycoKeys 36: 45-82. https://doi.org/10.3897/mycokeys.36.27002
Specimens and INSDC accession numbers of DNA sequences used in this study : Explanation note: Sequences retrieved from INSDC are denoted with*.
Supplementary material 2 from: Korhonen A, Seelan JSS, Miettinen O (2018) Cryptic species diversity in polypores: Skeletocutis nivea species complex. MycoKeys 36: 45-82. https://doi.org/10.3897/mycokeys.36.27002
Estimates of average genetic divergence over sequence pairs within species : Explanation note: The number of base substitutions per site ×100 (%) obtained from averaging over all sequence pairs within each species are shown in first column, followed by standard error (SE) estimates (500 bootstrap replicates) and the number (N) of compared sequences are shown.
Supplementary material 4 from: Korhonen A, Seelan JSS, Miettinen O (2018) Cryptic species diversity in polypores: Skeletocutis nivea species complex. MycoKeys 36: 45-82. https://doi.org/10.3897/mycokeys.36.27002
Estimates of evolutionary divergence over tef1 sequence pairs between species : Explanation note: The number of base substitutions per site ×100 (%) obtained from averaging over all sequence pairs between species (1–13) are shown below the diagonal and standard error (SE) estimates (500 bootstrap replicates) above the diagonal.
Supplementary material 3 from: Korhonen A, Seelan JSS, Miettinen O (2018) Cryptic species diversity in polypores: Skeletocutis nivea species complex. MycoKeys 36: 45-82. https://doi.org/10.3897/mycokeys.36.27002
Estimates of genetic divergence over ITS sequence pairs between species : Explanation note: The number of base substitutions per site ×100 (%) obtained from averaging over all sequence pairs between species (1–14) are shown below the diagonal and standard error (SE) estimates (500 bootstrap replicates) above the diagonal.
FIGURE 17 in High species diversity of the genus Neopanorpa (Mecoptera: Panorpidae) in Yunnan Province, China
FIGURE 17. Neopanorpa quadristigma sp. n. (a)–(c) Male aedeagal complex, ventral, lateral, and dorsal views; (d) Female subgenital plate, ventral view; (e)–(g) Female genital plate, ventral, lateral, and dorsal views. For abbreviations see legends of Figure 5. Scale bars: a–c, e–g = 0.2 mm; d = 0.1 mm.
FIGURE 16 in High species diversity of the genus Neopanorpa (Mecoptera: Panorpidae) in Yunnan Province, China
FIGURE 16. Neopanorpa quadristigma sp. n. (a) Male, dorsal view; (b) Female, dorsal view; (c) Head, frontal view; (d) Thorax, dorsal view; (e) Notal organ, dorsal view; (f) A5–A9, lateral view; (g) Male genital bulb, ventral view; (h) Male genital bulb, dorsal view; (i) Male epandrium and hypandrium, lateral view; (j) Gonostylus, ventral view; (k) Gonostylus, dorsal view. For abbreviations see legends of Figure 4. Scale bars: a–b = 5 mm; c–e, g–i = 0.5 mm; f = 1 mm; j–k = 0.25 mm.
FIGURE 18 in High species diversity of the genus Neopanorpa (Mecoptera: Panorpidae) in Yunnan Province, China
FIGURE 18. Neopanorpa nielseni. (a)–(c) Male aedeagal complex, ventral, lateral, and dorsal views; (d) Female subgenital plate, ventral view; (e)–(g) Female genital plate, ventral, lateral, and dorsal views. For abbreviations see legends of Figure 5. Scale bars: a–d = 0.25 mm; e–g = 0.2 mm.
FIGURE 15 in High species diversity of the genus Neopanorpa (Mecoptera: Panorpidae) in Yunnan Province, China
FIGURE 15. Neopanorpa longistipitata sp. n. (a)–(c) Male aedeagal complex, ventral, lateral, and dorsal views; (d) Female subgenital plate, ventral view; (e)–(g) Female genital plate, ventral, lateral, and dorsal views. For abbreviations see legends of Figure 5. Scale bars: a–c = 0.25 mm; d–g = 0.1 mm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.