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3,292 results for “DNA Barcode”
FIGURE 36 in Identification of early life-history stages of Caribbean Apogon (Perciformes: Apogonidae) through DNA Barcoding
FIGURE 36. Apogon mosavi, larva, 15.0 mm SL, DNA # BLZ 5454, photograph by L. Weigt.
FIGURE 22. A in A systematic study on Endotribelos Grodhaus (Diptera: Chironomidae) from Brazil including DNA barcoding to link males and females
FIGURE 22. A Kimura two-parameter neighbor-joining tree of Endotribelos species.
FIGURE 6 in A systematic study on Endotribelos Grodhaus (Diptera: Chironomidae) from Brazil including DNA barcoding to link males and females
FIGURE 6. Endotribelos fulvidus sp. n. Female. a. Thorax, dorsal view. b. Genitalia ventral.
FIGURE 2 in A systematic study on Endotribelos Grodhaus (Diptera: Chironomidae) from Brazil including DNA barcoding to link males and females
FIGURE 2. Endotribelos bicolor sp. n. Female. Genitalia ventral.
Figure 9 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 9 - Neighbour-joining tree of COI sequence divergences (K2P model) of studied Julida. Note well-supported COI groups for each species allowing for sequence-based species identification. Numbers above and below branches show bootstrap values of NJ analysis, branch length indicates sequence divergence in %.
Figure 8 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 8 - Neighbour-joining tree of COI sequence divergences (K2P model) of studied Polyxenida, Polydesmida and Glomerida. Solid circles: examples of excellent resolution of very close species of the genus Polydesmus. Numbers above and below branches show bootstrap values of NJ analysis, branch length indicates sequence divergence in %.
Figure 11 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 11 - Neighbour-joining tree of COI sequence divergences (K2P model) of studied Chilopoda. Asterisks: Deep divergences within Lithobius tricuspis and Lithobius mutabilis suggesting cryptic speciation. Numbers above and below branches show bootstrap values of neighbour-joining analysis, branch length indicates sequence divergence in %.
Figure 7 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 7 - Complete neighbour-joining tree of COI sequence divergences (K2P model) of studied myriapod orders; barcoded terminal taxa and clades above their basal nodes omitted. This tree serves for orientation in the detailed trees given in Figs 8–11.
Figure 1 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 1 - Map of sampled areas (dots). For checks of intraspecific variability of COI sequences, localities in Bavaria, but also elsewhere within the species' areas of distribution, have been sampled and analyzed (sampling data from November 2008 to November 2010; a few specimens from northern Spain omitted).
Figure 2 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 2 - Some Bavarian myriapods for which barcodes are now available. A. Glomeris pustulata Latreille, 1804. B. Polydesmus helveticus Verhoeff, 1894. C. Cylindroiulus boleti (C. L. Koch, 1847). D. Unciger foetidus (C. L. Koch, 1838). E. Haasea flavescens (Latzel, 1884). F. Atractosoma meridionale Fanzago, 1876. G. Cryptops parisi Brölemann, 1920. H. Henia vesuviana (Newport, 1845). Photos: J. Spelda.
Figure 10 from: Spelda J, Reip H, Oliveira Biener U, Melzer R (2011) Barcoding Fauna Bavarica: Myriapoda – a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda). ZooKeys 156: 123-139. https://doi.org/10.3897/zookeys.156.2176
Figure 10 - Neighbour-joining tree of COI sequence divergences (K2P model) of studied Chordeumatida. Asterisk: deep barcoding divergence in Chordeuma silvestre; solid squares: polyphyly of genus Ochogona; arrows: low sequence divergences in the genera Craspedosoma, Listrocheiritium and Rhymogona. Numbers above and below branches show bootstrap values of NJ analysis, branch length indicates sequence divergence in %.
Figure 6 from: Stoev P, Akkari N, Zapparoli M, Porco D, Enghoff H, Edgecombe G, Georgiev T, Penev L (2010) The centipede genus Eupolybothrus Verhoeff, 1907 (Chilopoda: Lithobiomorpha: Lithobiidae) in North Africa, a cybertaxonomic revision, with a key to all species in the genus and the first use of DNA barcoding for the group. ZooKeys 50: 29-77. https://doi.org/10.3897/zookeys.50.504
Figure 6 - a – A view of the entrance of cave Sidi Bou Gabrine, Jebel Zaghouan. b – A view of Jebel Zaghouan, Zaghouan Governorate, NE Tunisia.
Figure 2 from: Stoev P, Akkari N, Zapparoli M, Porco D, Enghoff H, Edgecombe G, Georgiev T, Penev L (2010) The centipede genus Eupolybothrus Verhoeff, 1907 (Chilopoda: Lithobiomorpha: Lithobiidae) in North Africa, a cybertaxonomic revision, with a key to all species in the genus and the first use of DNA barcoding for the group. ZooKeys 50: 29-77. https://doi.org/10.3897/zookeys.50.504
Figure 2 - Eupolybothrus nudicornis: a – prefemora of leg-pair 15, dorsal view b – coxae and male first genital sternite c – female gonopods. Paramedian sulci indicated by arrows (Fig. 2a). mi – medial incision.
Figure 1 from: Stoev P, Akkari N, Zapparoli M, Porco D, Enghoff H, Edgecombe G, Georgiev T, Penev L (2010) The centipede genus Eupolybothrus Verhoeff, 1907 (Chilopoda: Lithobiomorpha: Lithobiidae) in North Africa, a cybertaxonomic revision, with a key to all species in the genus and the first use of DNA barcoding for the group. ZooKeys 50: 29-77. https://doi.org/10.3897/zookeys.50.504
Figure 1 - Eupolybothrus nudicornis: a – cephalic plate; b – ocelli and Tömösváry's organ; c – apical part of antenna; d – clypeus; e – leg 10; f – forcipule; g – TT 6-13; h – sternite 7; i – tarsus 1 and tarsus 2 of leg 15, female from Chambi N.P. Clypeal setae indicated by an arrow (Fig. 1d). Fig. 1f without scale. ss – serial setae; ts – tarsal spine.
Figure 5 from: Stoev P, Akkari N, Zapparoli M, Porco D, Enghoff H, Edgecombe G, Georgiev T, Penev L (2010) The centipede genus Eupolybothrus Verhoeff, 1907 (Chilopoda: Lithobiomorpha: Lithobiidae) in North Africa, a cybertaxonomic revision, with a key to all species in the genus and the first use of DNA barcoding for the group. ZooKeys 50: 29-77. https://doi.org/10.3897/zookeys.50.504
Figure 5 - Neighbor joining tree (K2P) of 5 species of Eupolybothrus based on the COI 5' 'barcoding fragment'. Bootstrap support values are shown on the branches. The upper and lower sides of the triangle represent respectively the maximum and minimum of genetic distances within the species.
Figure 4 from: Stoev P, Akkari N, Zapparoli M, Porco D, Enghoff H, Edgecombe G, Georgiev T, Penev L (2010) The centipede genus Eupolybothrus Verhoeff, 1907 (Chilopoda: Lithobiomorpha: Lithobiidae) in North Africa, a cybertaxonomic revision, with a key to all species in the genus and the first use of DNA barcoding for the group. ZooKeys 50: 29-77. https://doi.org/10.3897/zookeys.50.504
Figure 4 - Eupolybothrus kahfi sp. n., male, holotype: a – tarsus 1, tarsus 2 and pretarsus of a midbody leg; b – tarsus 1, tarsus 2 and pretarsus of leg 15; c – prefemora of legs 15, dorso-lateral view; d – coxae and male first genital sternite. ac - accessory claw; dmp - dorso-median protuberance.
Figure 3 from: Stoev P, Akkari N, Zapparoli M, Porco D, Enghoff H, Edgecombe G, Georgiev T, Penev L (2010) The centipede genus Eupolybothrus Verhoeff, 1907 (Chilopoda: Lithobiomorpha: Lithobiidae) in North Africa, a cybertaxonomic revision, with a key to all species in the genus and the first use of DNA barcoding for the group. ZooKeys 50: 29-77. https://doi.org/10.3897/zookeys.50.504
Figure 3 - Eupolybothrus kahfi sp. n., male, holotype: a – cephalic plate; b – ocelli and Tömösváry's organ; c – apical part of antenna; d – clypeus; e – forcipule; f – TT 8-14; g – sternite 7; h – leg 10. Figs 3e and f without scales. ss – serial setae. Posterior triangular projections on TT 9, 11 and 13 indicated by arrows (Fig. 3f), clypeal setae indicated by an arrow (Fig. 3d).
Figure 2 from: Leavitt S, Fernández-Mendoza F, Pérez-Ortega S, Divakar P, Lumbsch T, St. Clair L (2013) DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including five new species. MycoKeys 7: 1-22. https://doi.org/10.3897/mycokeys.7.4508
Figure 2 - A Cartoon representation of the maximum likelihood ITS topology obtained from 240 Rhizoplaca melanophthalma sensu lato specimens in Leavitt et al. (in review). Values at each node indicate non-parametric-bootstrap support; only support values > 50% are indicated B Box plots of ITS genetic distances within each new species, all intraspecific distances, and all interspecific distances. In each box plot, the box shows the interquartile range (IQR) of the data. The IQR is defined as the difference between the 75th percentile and the 25th percentile. The solid and dotted line through the box represent the median and the average length, respectively; and C The coalescent-based species-tree for the Rhizoplaca melanophthalma species-complex estimated from five genetic markers (ITS, IGS, group I intron, β-tubulin, and MCM7 loci) in Leavitt et al. 2011a.
Figure 1 from: Leavitt S, Fernández-Mendoza F, Pérez-Ortega S, Divakar P, Lumbsch T, St. Clair L (2013) DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including five new species. MycoKeys 7: 1-22. https://doi.org/10.3897/mycokeys.7.4508
Figure 1 - Variation in morphology and habit within Rhizoplaca melanophthalma sensu lato. Scale bar = 5 mm.
Figure 1 from: Ainsworth A, Cannon P, Dentinger B (2013) DNA barcoding and morphological studies reveal two new species of waxcap mushrooms (Hygrophoraceae) in Britain. MycoKeys 7: 45-62. https://doi.org/10.3897/mycokeys.7.5860
Figure 1 - Maximum likelihood phylogram using full and partial nuclear ribosomal internal transcribed spacers (ITS) sequences. Numbers above branches are nonparametric bootstrap values. Tree is arbitrarily rooted at the midpoint. Two well-supported terminal clades representing the new species Gliophorus reginae and Gliophorus europerplexus are superimposed over light grey boxes. Species names for specimens from which sequences were derived are followed by fungarium or INSD accession number, and geographic location. Notations (H) and (P) indicate specimens used were holotypes or paratypes, respectively.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.