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452 results for “Mitogenomics”
Data from: Evolutionary history of endemic Sulawesi squirrels constructed from UCEs and mitogenomes sequenced from museum specimens
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Data from: Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny
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Museomics of tree squirrels: a dense taxon sampling of mitogenomes reveals hidden diversity, phenotypic convergence, and the need of a taxonomic overhaul
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Data from: Resolving the phylogenetic position of Darwin’s extinct ground sloth (Mylodon darwinii) using mitogenomic and nuclear exon data
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Data from: Phylogenomic reconstruction of sportive lemurs (genus Lepilemur) recovered from mitogenomes with inferences for Madagascar biogeography
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Comparison of mitogenomes of three Petalocephala species (Hemiptera: Cicadellidae: Ledrinae) and their phylogenetic analysis
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Data from: Shotgun mitogenomics across body size classes in a local assemblage of tropical Diptera: phylogeny, species diversity and mitochondrial abundance spectrum
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Data from: Fin whale (Balaenoptera physalus) mitogenomics: a cautionary tale of defining sub-species from mitochondrial sequence monophyly
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Data from: High-throughput monitoring of wild bee diversity and abundance via mitogenomics
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Distinctive mitogenomic lineages within populations of white-tailed eagles (Haliaeetus albicilla)
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Data from: Evolutionary neutrality of mtDNA introgression: evidence from complete mitogenome analysis in roe deer
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Complete mitogenome of the invasive land flatworm Parakontikia ventrolineata, the second Geoplanidae (Platyhelminthes) to display an unusually long cox2 gene
<p>Complete mitogenome of the invasive flatworm Parakontikia ventrolineata as fasta file.</p>
Fig. 13 in Taxonomic revision of West African cone snails (Gastropoda: Conidae) based upon mitogenomic studies: implications for conservation
Fig. 13. Changes in distribution affecting Red List status due to the updated classification of cone snails from West Africa. A. The case of Africonus crotchii (Reeve, 1849) as an example of an increase in range distribution, and thus an estimated decrease on its risk status. B. The case of Kalloconus ateralbus (Kiener, 1850) as an example of a decrease in range distribution, and thus an estimated increase on its risk status.
Fig. 11. A. Conus mercator Linnaeus, 1758 in Taxonomic revision of West African cone snails (Gastropoda: Conidae) based upon mitogenomic studies: implications for conservation
Fig. 11. A. Conus mercator Linnaeus, 1758, lectotype, 24.0 mm (LSL 254). B. Varioconus mercator (Linnaeus, 1758) comb. nov., 34.7 mm (MNCN 15.05/78482). C. Varioconus mercator f. stimpsonorum (Cossignani & Allary, 2019), 39.1 mm (MNCN 15.05/78419). D. Lautoconus fernandi Petuch & Berschauer, 2018, holotype, 35.4 mm (MNHN IM-2000-34012). E. Lautoconus gambiensis Petuch & Berschauer, 2018, holotype, 21.6 mm (MNHN IM-2000-34013). F. Lautoconus rikae Petuch & Berschauer, 2018, holotype, 17.9 mm (MNHN IM-2000-34014). G. Conus orri (Ninomiya & da Motta, 1982), paratype, 30.1 mm (SNMS ZI0091234). H. Conus reticulatus Born, 1778, lectotype, 25 mm (NHMW Mollusca 14159). I. Varioconus reticulatus (Born, 1778) comb. nov., 29.5 mm (MNCN 15.05/78439). J. Conus tacomae Boyer & Pelorce, 2009, holotype, 17 mm (MNHN IM-2000- 21046). K. Conus trencarti Nolf & Verstraeten, 2008, holotype, 26.3 mm (MNHN IM-2000-21455). L. Varioconus unifasciatus (Kiener, 1850) comb. nov., 39.8 mm (MNCN 15.05/78451). Scale bars = 10 mm.
Fig. 3 in Taxonomic revision of West African cone snails (Gastropoda: Conidae) based upon mitogenomic studies: implications for conservation
Fig. 3 (opposite page). A. Africonus antoniaensis Cossignani & Fiadeiro, 2014, 14.5 mm (MNCN 15.05/79889). B. Conus antoniomonteiroi Rolán, 1990, holotype, 16.8 mm (MNCN 15.05/1100). C. Conus bellulus Rolán, 1990, holotype, 18.9 mm (MNCN 15.05/1098). D. Conus boavistensis Rolán & Fernandes in Rolán, 1990, holotype, 13.2 mm (MNCN, 15.05/1089). E. Africonus borgesi (Trovão, 1979), 30.5 mm (MNCN 15.05/88646). F. Conus navarroi calhetae Rolán, 1990, holotype, 26.8 mm (MNCN 15.05/1096). G. Conus crotchii Reeve, 1849, neotype, 22.5 mm (MNCN 15.05/79971). H. Conus irregularis G.B. Sowerby II, 1858, lectotype, 28.3 mm (NHMUK 197871/1). I. Africonus cuneolus (Reeve, 1843), 28.2 mm (MNCN, 15.05/79712). J. Conus curralensis Rolán, 1986, holotype, 17 mm (MNCN 15.05/1010). K. Africonus damottai (Trovão, 1979), 18.2 mm (MNCN 15.05/80401). L. Africonus decoratus (Röckel, Rolán & Monteiro, 1980), 23.1 mm (MNCN 15.05/78589). M. Africonus delanoyae (Trovão, 1979), 27.6 mm (MNCN 15.05/80397). N. Africonus denizi Afonso & Tenorio, 2011, holotype, 11.6 mm (MNCN 15.05/60000). O. Conus diminutus Trovão & Rolán, 1986, neotype, 14.8 mm (MNCN 15.05/80416). P. Africonus espingueirensis Cossignani & Fiadeiro, 2017, holotype, 9.7 mm (MMM). Scale bars = 10 mm
Fig. 12 in Taxonomic revision of West African cone snails (Gastropoda: Conidae) based upon mitogenomic studies: implications for conservation
Fig. 12. Stacked bar charts of the accumulated number of species described in the period 1974–2020 before (A) and after (B) revision, showing the contribution to the total number of species of the Cabo Verde endemics (blue), Angola endemics (red) and the remaining species from West Africa (green). Note that Angolan cone endemics still await a thorough genetic revision.
Fig. 1 in Taxonomic revision of West African cone snails (Gastropoda: Conidae) based upon mitogenomic studies: implications for conservation
Fig. 1. Cumulative number of described (red) and valid or provisionally valid (blue) West African cone species per year after revision.
Fig. 5 in Taxonomic revision of West African cone snails (Gastropoda: Conidae) based upon mitogenomic studies: implications for conservation
Fig. 5 (opposite page). A–J, M. Africonus insulae sp. nov. A–B. Holotype (dorsal and ventral views), 23.9 mm (MNCN 15.05/78581). C. Paratype 1, 20.0 mm (MNCN 15.05/78585). D. Paratype 2, 18.8 mm (MNHN IM-2000-35016). E. Paratype 3, 16.2 mm (MNCN 15.05/78586). F. Paratype 4, 24.1 mm (MNCN 15.05/78579). G. Paratype 5, 19.1mm (MNCN 15.05/78590). H. Paratype 6, 23.0 mm (MNCN 15.05/78582). I. Paratype 7, 22.6 mm (MNCN 15.05/78584). J. Paratype 8, 24.9 mm (UCV 2019/00015). K. Africonus curralensis (Rolán, 1986), 23.0 mm (MNCN 15.05/78591). L. Africonus decoratus (Röckel, Rolán & Monteiro, 1980), 30.5 mm (MNCN 15.05/78578). M. Radular tooth, Africonus insulae sp. nov., Curral, Santa Luzia Island, Cabo Verde (MJT), SL = 29.2 mm. Scale bars = 10 mm unless otherwise indicated.
Ancient mitogenomics clarifies radiation of extinct Mascarene giant tortoises (Cylindraspis spp.)
<p>The five extinct giant tortoises of the genus <i>Cylindraspis</i> belong to the most iconic species of the enigmatic fauna of the Mascarene Islands that went largely extinct after the discovery of the islands. To resolve the phylogeny and biogeography of <i>Cylindraspis</i>, we analysed a data set of 45 mitogenomes that includes all lineages of extant tortoises and eight near-complete sequences of all Mascarene species extracted from historic and subfossil material. <i>Cylindraspis </i>is an ancient lineage that diverged as early as the late Eocene. Diversification of <i>Cylindraspis</i> commenced in the mid-Oligocene, long before the formation of the Mascarene Islands. This rejects any notion suggesting that the group either arrived from nearby or distant continents over the course of the last millions of years or had even been translocated to the islands by humans. Instead, <i>Cylindraspis</i> likely originated on now submerged islands of the Réunion Hotspot and utilized these to island hop to reach the Mascarenes. The final diversification took place both before and after the arrival on the Mascarenes. With <i>Cylindraspis</i> a deeply divergent clade of tortoises became extinct that evolved long before the dodo or the Rodrigues solitaire, two other charismatic species of the lost Mascarene fauna.</p>
FIGURE 1 in Complete mitochondrial genomes of three crickets (Orthoptera: Gryllidae) and comparative analyses within Ensifera mitogenomes
FIGURE 1. Comparison of AT skews of Grylloidea, Gryllotalpoidea and Tettigonioidea.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.