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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - scRNAseq v2
GEO Series GSE260798. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analysis of a pre-clinical NF1 pseudarthrosis fracture model
GEO Series GSE218046. Mus musculus. 2 samples. Type: Other.
Novel cell-to-cell communications between macrophages and fibroblasts regulate obesity-induced adipose tissue fibrosis [spatial transcriptomics]
GEO Series GSE275590. Mus musculus. 2 samples. Type: Other.
Spatial dynamics of brain development and neuroinflammation [Spatial Transcriptomics]
GEO Series GSE308526. Mus musculus. 28 samples. Type: Other.
HCC spatial transcriptomic profiling reveals significant and potentially targetable cancer-endothelial interactions
GEO Series GSE277104. Homo sapiens. 308 samples. Type: Other.
Spatial transcriptomics reveal signatures of histopathological changes in muscular sarcoidosis
GEO Series GSE243291. Homo sapiens. 2 samples. Type: Other.
Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [RNA-Seq]
GEO Series GSE309820. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma
GEO Series GSE269875. Homo sapiens; Mus musculus. 15 samples. Type: Other.
Spatial characterization of the motor and non-motor somal and axonal transcriptome in adult healthy and mutant FUS mice
GEO Series GSE269707. Mus musculus. 32 samples. Type: Other.
Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model
GEO Series GSE296545. Mus musculus. 4 samples. Type: Other.
Deciphering the molecular mechanism of flight loss in mulberry silkworm through the integration of single-cell and spatial transcriptomics [stRNA-seq]
GEO Series GSE253665. Bombyx mandarina; Bombyx mori. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Genetic profiles of small intestinal and colonic metaplastic Paneth cells by spatial transcriptomics
GEO Series GSE306374. Homo sapiens. 2 samples. Type: Other.
Spatial transcriptomics of primary human hepatoblastomas
GEO Series GSE249965. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing; Other.
A targetable developmental program co-regulates angiogenesis and immune evasion [Spatial Transcriptomics]
GEO Series GSE311909. Homo sapiens. 2 samples. Type: Other.
Spatial transcriptomic profiles of prostate tissue obtained from a patient diagnosed with benign prostatic hyperplasia (BPH).
GEO Series GSE242249. Homo sapiens. 1 samples. Type: Other.
Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling
GEO Series GSE174313. Mus musculus. 4 samples. Type: Other.
Spatial Transcriptomics of Lungs Infected with Coccidioides posadasii
GEO Series GSE274767. Mus musculus. 2 samples. Type: Other.
Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics]
GEO Series GSE213388. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Ehmt2 Inactivation in Pancreatic Epithelial Cells Shapes the Transcriptional Landscape and Inflammation Response of the Whole Pancreas [Spatial transcriptomics]
GEO Series GSE269256. Mus musculus. 4 samples. Type: Other.
Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver
GEO Series GSE240429. Homo sapiens. 4 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.