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291 results for “chaptering”
Chapter 4 - Bubble-induced mass transport at vertical hydrogen evolving electrodes
<p>This file contains the datasets relating to Chapter 4 of the PhD thesis "Mass transport at gas evolving Electrodes" by Jorrit Bleeker.</p> <p>This chapter has also been submitted as a publication titled:<br>"Bubble-induced mass transport at vertical hydrogen evolving electrodes"</p> <p>Authors: Jorrit Bleeker1, Florianne M. Wiegel1, Aron P. Kahn1, J.W. (Willem) Haverkort2, <br>Christiaan V. Schinkel1, Maxime Hoogland1, Lorenz M. Baumgartner1, Wolter F. Jager1, <br>J.R. (Ruud) van Ommen1, David A. Vermaas 1,*</p> <p>1Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, Delft 2629 HZ, the Netherlands<br>2Process & Energy Department, Faculty of Mechanical Engineering, Delft University of Technology, Leeghwaterstraat 39, Delft 2628 CB, the Netherlands<br>Corresponding Author, email D.A.Vermaas@tudelft.nl </p> <p>Instruction</p> <p>1. Excel files for all graphs are included here</p> <p>2. For 2D plots, python scripts are included to recreate the images<br>Raw datafiles are included<br>We recommend running these scripts with Spyder</p> <p>3. Comsol models are included. For the uPIV model the raw data is not included.<br>This can be provided upon reasonable request</p> <p>4. Supplementary video, we recommend playing on VLC media player</p>
Chapter 5 - CO2 electrolysis under pressure pulsed flow
<p>This file contains the datasets relating to Chapter 5 of the PhD thesis "Mass transport at gas evolving Electrodes" by Jorrit Bleeker.</p> <div>This chapter has also been submitted as a publication titled</div> <div>"Pressure-pulsed flow triples mass transport in aqueous CO2 electrolysis"</div> <div> </div> <div>Authors:</div> <div>Jorrit Bleeker1, Lisanne C. Bakker1, Sue S.J. van Deursen1, Timo J.J.M. van Overveld1, Katie M.R. Lawrence2, </div> <div>Isabell Bagemihl1, Giacomo Lastrucci1, Duco Bosma1, Christiaan V. Schinkel1, Evert C. Wagner1, </div> <div>J. Ruud van Ommen1, David A. Vermaas1,*</div> <div> </div> <div>1Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, Delft 2629 HZ, the Netherlands</div> <div>2Process & Energy Department, Faculty of Mechanical Engineering, Delft University of Technology, Leeghwaterstraat 39, Delft 2628 CB, the Netherlands</div> <div>*Corresponding Author, email: D.A.Vermaas@tudelft.nl </div> <div> </div> <div>Instruction:</div> <div> </div> <div>1. The data for all figures are included in excel files here.</div> <div> </div> <div>2. For Figure S11 the python scripts and accompanying datafiles are included:</div> <div>We recommend running these in Spyder 4.2.5. (Python 3.8)</div> <div> </div> <div>3. Supplementary videos are included as MP4 files here, we recommend playing them on VLC media player</div>
Thesis- Chapter 4 data
<p>This folder contains 42 items </p> <ol> <li>avg.csv file: not to be used, just an indicator during experimental data collection</li> <li>bg.csv file for background rates at the four detectors; the first columns represent detectors 1,2,3 and 4, respectively. The integration window is 1 second, and the data is repeated 100 times, corresponding to 100 rows.</li> <li><span>coincidences<strong>ij.</strong>csv: here, <strong>i </strong>represents the source, and <strong>j </strong>represents the different intensities under consideration for different mean photon numbers.</span> The first four rows for each file are the singles in detectors 1,2,3 and 4, respectively. The consecutive six rows are the coincidences between detectors 12, 13, 14, 23, 24, and 34, respectively. The consecutive four rows are the 3-fold coincidences between the detectors 123,124.134, and 234, respectively. The last row is the four fold coincidences between all four detectors.</li> </ol>
Supplementary Datasets for: Chapter 6: Timescales of dyke intrusion events in the Main Ethiopian Rift through olivine Fe-Mg diffusion chronometry
<p>Supplementary datasets for Chapter 6: Timescales of dyke intrusion events in the Main Ethiopian Rift through olivine Fe-Mg diffusion chronometry.</p> <p>Dataset S1: Standards, secondary standards, geochemical data and timescale data of olivine Fe-Mg diffusion profiles and carrier glasses.<br> Dataset S2: Combined and sorted dataset of greyscale images.</p>
Diamond Throne image sequence [chapter 01] 29/04/2020
<p><em>Precious Treasures from the Diamond Throne</em> (London: British Museum Press, 2020), image sequence [chapter 01] 29/04/2020.</p>
Appendix I - Chapter III - Murilo Zanini David P.h.D thesis
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Transformative Change Assessment Chapter 5 Subsidies Reform Data Package
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Transformative Change Assessment Chapter 3 Approaches Overlap and General Snowball Data Package
<p>Transformative Change Assessment Chapter 3 Approaches Overlap and General Snowball Data Package</p>
Results and Analysis of the Systematic Literature Review of the IPBES Global Assessment, Chapter 4
<p>The anonymised data</p>
Summary of heat transfer results for natural convection experiments - Chapter 6.xlsx
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ESM Chapter 2 - Drivers of vegetation development, biomass production and the initiation of peat formation in a newly constructed wetland
<p>Electronic supplementary material to Chapter 2 "Drivers of vegetation development, biomass production and the initiation of peat formation in a newly constructed wetland" of PhD thesis from Ciska Overbeek, "Peat formation on a former landfill - Production and decomposition of aquatic pioneer vegetation". </p>
Transformative Change Assessment Chapter 2 Technology Data Package
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Processed data for the sRNA landscape chapter
<p><strong>Processed data to be used in analyses related to the sRNA landscape. </strong></p> <p><strong>1) small RNA processed data from stem trichomes</strong>: <a href="https://zenodo.org/api/files/88937ea4-8f58-4970-a931-6f8c8388db87/2020-12-17_11-23_results_stem_trichomes.tar.gz">2020-12-17_11-23_results_stem_trichomes.tar.gz </a></p> <ul> <li>Original small RNA-seq fastq files: available at <a href="https://doi.org/10.5281/zenodo.4105911">https://doi.org/10.5281/zenodo.4105911</a></li> <li>Software: small-rna-seq-pipeline v0.4.4 available at <a href="https://zenodo.org/record/4333786">https://zenodo.org/record/4333786</a></li> </ul> <p> </p> <p><strong>2) small RNA processed data from bald stem, leaf primordium and leaf: </strong></p> <p>xxxx === to be added === xxx</p> <p> </p> <p><strong>3) mRNA-seq processed data (raw and scaled counts) from different tissues (stem trichomes, bald stem, leaf, leaf primordium): </strong> <a href="https://zenodo.org/api/files/1c5ca622-83cf-4ab6-8fc5-7c2f54dc84bb/20201117_snakemake_messenger_rnaseq_trichomes_and_other_tissues.tar.gz">20201117_snakemake_messenger_rnaseq_trichomes_and_other_tissues.tar.gz</a></p> <p>This file was obtained from the following original mRNA-seq fastq files:</p> <ul> <li>Stem trichomes of Moneymaker: <a href="https://doi.org/10.5281/zenodo.3569304">dataset available here</a></li> <li>Stem trichomes of LA0716: <a href="https://doi.org/10.5281/zenodo.3569304">dataset available here</a></li> <li>Stem trichomes of PI127826: <a href="https://doi.org/10.5281/zenodo.3611143">dataset available here</a></li> <li>Bald stems, leaf primordia and leaves of Moneymaker, LA0716 and PI127826: <a href="https://doi.org/10.5281/zenodo.3954272">datasets are available here</a>. Samples S28 to S48 were used. </li> </ul> <p>The pipeline used was <a href="https://github.com/BleekerLab/snakemake_rnaseq/releases/tag/v0.3.4)">Snakemake RNA-seq release 0.3.4</a></p> <p>The file contains:</p> <ul> <li><a href="https://zenodo.org/api/files/10c9d73a-f52b-4923-a793-2fe3326d5587/raw_counts.parsed.tsv?versionId=475a35bb-424d-48f0-bdf8-6ede0455c26e">raw_counts.parsed.tsv</a>: contains the raw counts that can be used for differential expression analysis (e.g. with DESeq2).</li> <li><a href="https://zenodo.org/api/files/10c9d73a-f52b-4923-a793-2fe3326d5587/scaled_counts.tsv?versionId=c1ae1e86-c797-42c8-ac88-f250b97d09b1">scaled_counts.tsv</a>: contains counts that are scaled between samples. This can be used for heatmap creation or PCA analysis for instance. NOT for differential analysis. </li> <li><a href="https://zenodo.org/api/files/10c9d73a-f52b-4923-a793-2fe3326d5587/samples.tsv?versionId=ebefd1b7-50cd-4408-88f6-0770d8540191">samples.tsv</a>.: a file listing the fastq files analysed. </li> <li><a href="https://zenodo.org/api/files/10c9d73a-f52b-4923-a793-2fe3326d5587/config.yaml?versionId=7e47dc9f-7a47-4fbd-9774-7dfa1a46abc1">config.yaml</a>: a file that contains the parameters used when running the pipeline. </li> </ul> <p> </p>
The Art of the Temple (Part 1: Introductory chapters)
<p>The Art of the Temple (Part 1: Introductory chapters)</p>
Chapter III
<p>Thesis title: Effects of sedimentary humic acids on endophytic microbiomes: implications and agronomical potential.</p> <p>Supplementary information of Chapter III: Culturable bacterial endophytes from sedimentary humic acid-treated plants: Potential use in plant growth promotion.</p>
Chapter 4
<p>Thesis title: Effects of sedimentary humic acids on endophytic microbiomes: implications and agronomical potential.</p> <p>Supplementary information of Chapter IV: The microbiome of barley root endosphere was modified by the application of sedimentary humic substances under different nitrogen fertilization regimes.</p>
Chapter II
<p>Thesis title: Effects of sedimentary humic acids on endophytic microbiomes: implications and agronomical potential.</p> <p>Supplementary information of the Chapter II. </p>
དབའ་བཞེད་ illustrations for publication [chapters 3]
<p>དབའ་བཞེད་ illustrations for publication [chapters 3]</p>
དབའ་བཞེད་ illustrations for publication [chapters 1-2]
<p>དབའ་བཞེད་ illustrations for publication</p>
དབའ་བཞེད་ illustrations for publication [chapters 3]
<p>དབའ་བཞེད་ illustrations for publication [chapters 3] B&W version.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.