Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
513
datasets available to search
ShareScore release 0.9.0
Dataset results
513 results for “molecular characters”
FIGURE 2 in First record of the genus Parasitorhabditis Fuchs, 1937 (Rhabditida, Nematoda) from Iran with notes on morphological and molecular characters of the Iranian population of P. obtusa (Fuchs, 1915) Chitwood & Chitwood, 1950
FIGURE 2. Light microphotographs of Iranian population of Parasitorhabditis obtusa. A: Female anterior region; B: Details of anterior end; C: Mature egg in the body of female; D: Male tail, lateral view; E: Male tail, ventral view; F–H: Female tail variation. (Abbreviations = a: Anus; g: Gubernaculum; s: Spicule and v: Vulva. (All scale bars=10 µm).
FIGURE 1 in First record of the genus Parasitorhabditis Fuchs, 1937 (Rhabditida, Nematoda) from Iran with notes on morphological and molecular characters of the Iranian population of P. obtusa (Fuchs, 1915) Chitwood & Chitwood, 1950
FIGURE 1. Line drawings of Iranian population of Parasitorhabditis obtusa. A: Male entire body; B: Female pharyngeal region; C: Female genital tract; D-G: Female tail variation; H: Male tail in ventral view; I: Male tail in lateral view; J: Female entire body.
FIGURE 3 in First record of the genus Parasitorhabditis Fuchs, 1937 (Rhabditida, Nematoda) from Iran with notes on morphological and molecular characters of the Iranian population of P. obtusa (Fuchs, 1915) Chitwood & Chitwood, 1950
FIGURE 3. Bayesian tree inferred under the GTR + I + G model from LSU D2-D3 partial sequences of Iranian population of Parasitorhabditis obtusa. Bayesian posterior probability (BPP) and maximum likelihood bootstrap (BS) values exceeding 50% are given on appropriate clades in the form BPP/BS. The new sequence is indicated in bold.
FIGURE 10 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 10. Phylogeny of the liparid clade Aenigmoliparia from the majority rule (50%) consensus tree from the Bayesian inference of a 490 bp alignment of 270 cytochrome c oxidase subunit one gene (COI) sequences. Nodal values represent Bayesian posterior probabilities and bootstrap values from the maximum likelihood analysis (above and below branches, respectively). Species names are followed by a catalog number or BOLD "Sequence ID" number when represented by a sequence from a single specimen in our dataset. N indicates number of sequences, when multiple sequences support a branch tip. Boldface species names indicate species placed in different positions in COI and RADseq trees. Only unique sequences were subjected to the analyses (Appendix Table 1); other identical sequences surveyed are listed in Appendix Table 2.
FIGURE 7 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 7. Majority-rule (50%) consensus phylogenetic tree of Shen et al. (2017, after fig. S6), derived from a Bayesian inference of a 440 bp alignment of cytochrome c oxidase subunit 1 gene (COI) sequences for 84 samples of 83 liparid species. Bayesian posterior probabilities are above branches. Tree is rooted with species of the Cyclopteridae. Corrected identifications based on our study are in parentheses.
FIGURE 9 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 9. Phylogeny of the genus Liparis, excluding L. fucensis depicted in Figure 8, from the majority rule (50%) consensus tree from the Bayesian inference of a 490 bp alignment of 270 cytochrome c oxidase subunit one gene (COI) sequences. Nodal values represent Bayesian posterior probabilities and bootstrap values from the maximum likelihood analysis (above and below, respectively). Species names are followed by a catalog number or BOLD "Sequence ID" number when represented by a sequence from a single specimen in our dataset. N indicates number of sequences, when multiple sequences support a branch tip. Only unique sequences were subjected to the analyses (Appendix Table 1); other identical sequences surveyed are listed in Appendix Table 2.
FIGURE 6 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 6. Majority rule (50%) consensus phylogenetic tree of Gardner et al. (2016, after fig. 4), derived from Bayesian inference and maximum parsimony analysis of a 492 bp alignment of cytochrome c oxidase subunit 1 gene (COI) sequences of 492 bp for 128 samples of 23 liparid species. Bootstrap values are above and Bayesian posterior probabilities are below branches that lead to multiple species. Tree is rooted with Liparis gibbus. Corrected identifications based on our study are in parentheses.
FIGURE 12 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 12. Phylogeny of selected eastern North Pacific liparids inferred using genome-wide restriction-site associated DNA sequences (RADseq; –p 28, –r 0.5) with maximum likelihood and Bayesian methods. Majority rule (50%) consensus tree of individual sequences. Nodal values represent Bayesian posterior probabilities and bootstrap values from the maximum likelihood analysis (above and below branches, respectively); double asterisks denote Bayesian posterior probabilities of 1 and bootstrap support of 100%. Species names are followed by the University of Washington Fish Collection catalog number for the specimen. Boldface species names indicate species placed in different positions in COI and RADseq trees.
FIGURE 4 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 4. Unrooted neighbor-joining tree of Steinke et al. (2009, after fig. 4), derived from cluster analysis of a 650 bp alignment of cytochrome c oxidase subunit 1 gene (COI) sequences for 78 samples of 19 liparid species. Bootstrap values>80 are above branches leading to multiple species. Corrected identifications based on our study are in parentheses.
FIGURE 2 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 2. Phylogenetic hypothesis of Balushkin (1996, after fig. 4), derived from a manual cladistic analysis of morphological data, including seven osteological and external characters, for 26 liparid genera.
FIGURE 1 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 1. Phylogenetic hypothesis of Kido (1988, after fig. 20), derived from a maximum parsimony analysis of morphological data, using 34 osteological and external characters, for 60 liparid species.
FIGURE 3 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 3. Majority-rule (50%) consensus tree of Knudsen et al. (2007, after fig. 3), derived from a Bayesian analysis of three combined datasets composed of mitochondrial DNA (16S and cytochrome b) and morphological data for 24 liparid species. Tree is rooted with species of the Cyclopteridae. Posterior probabilities are above branches.
FIGURE 5 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 5. Consensus phylogenetic tree of Duhamel et al. (2010, after fig. 3), derived from Bayesian and maximum parsimony analyses of a 668 bp alignment of cytochrome c oxidase subunit 1 gene (COI) sequences for 157 samples of 46 liparid species. Bayesian posterior probabilities are above branches that lead to multiple species. Tree is rooted with species of the Cyclopteridae and Zoarcidae. Corrected identifications based on our study are in parentheses.
FIGURE 8 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 8. Phylogeny of the Liparidae. Majority rule (50%) consensus tree from the Bayesian inference of a 490 bp alignment of 270 cytochrome c oxidase subunit one gene (COI) sequences. Nodal values represent Bayesian posterior probabilities and bootstrap values from the maximum likelihood analysis (above and below, respectively). Species names are followed by a catalog number or BOLD "Sequence ID" number when represented by a sequence from a single specimen in our dataset. N indicates number of sequences, when multiple sequences support a branch tip. Only unique sequences were subjected to the analyses (Appendix Table 1); other identical sequences surveyed are listed in Appendix Table 2. Clades Liparis, Aenigmoliparia, and Paraliparia are depicted in Figures 9, 10, and 11, respectively.
FIGURE 13 H–O in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 13 H–O. Pectoral girdles of selected species of the Cyclopteridae and Liparidae: H) Prognatholiparis ptychomandibularis, UW 156749; I) Acantholiparis opercularis, UW 118624; J) Careproctus sp. cf. melanurus, UW 119240; K) Paraliparis dactylosus, UW 116232; L) Rhinoliparis attenuatus, UW 113736; M) P. cephalus, UW 117527; N) Paraliparis pectoralis, UW 117515; O) P. ulochir, UW 150802.
FIGURE 13 A–G in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 13 A–G. Pectoral girdles of selected species of the Cyclopteridae and Liparidae: A) Eumicrotremus orbis, UW 111284; B) Nectoliparis pelagicus, UW 119455; C) Liparis gibbus, UW 119092; D) Crystallichthys cyclospilus, UW 47840; E) Careproctus macrodiscus, FAKU 137835; F) Careproctus marginatus, FAKU 144616; G) Careproctus roseofuscus, FAKU 144615
FIGURE 11 in Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters
FIGURE 11. Phylogeny of the liparid clade Paraliparia from the majority rule (50%) consensus tree from the Bayesian inference of a 490 bp alignment of 270 cytochrome c oxidase subunit one gene (COI) sequences. Nodal values represent Bayesian posterior probabilities and bootstrap values from the maximum likelihood analysis (above and below, respectively). Species names are followed by a catalog number or BOLD "Sequence ID" number when represented by a sequence from a single specimen in our dataset. N indicates number of sequences, when multiple sequences support a branch tip. Only unique sequences were subjected to the analyses (Appendix Table 1); other identical sequences surveyed are listed in Appendix Table 2.
FIGURE 5 in Taxonomy of the tribe Apieae (Apiaceae) revisited as revealed by molecular phylogenies and morphological characters
FIGURE 5. Reconstruction of the eight selected morphological characters on the majority consensus tree obtained from the Bayesian analysis of the ITS matrix. Only clades belonging to tribe Apieae, and one terminal per species are displayed. A. Life form; B. Leaf blade shape; C. Presence and persistence of bracts; D. Presence and persistence of bracteoles; E. Flower colour; F. Mericarp indumentum; G. Mericarps dorsal ribs morphology; H. Mericarps marginal ribs morphology. Legend for G is as follow: a, ribs keeled; b, ribs narrowly winged; c, ribs not prominent but visible as lines; d, ribs inconspicuous. At the right, accepted taxa names are showed in regular italics.
FIGURE 4 in Taxonomy of the tribe Apieae (Apiaceae) revisited as revealed by molecular phylogenies and morphological characters
FIGURE 4. Transverse section of the mericarps of species representing of all the genera of tribe Apieae except Billburttia. All the photographs show mericarps in cross section except for Naufraga (J) which is a complete schizocarp. Scale bar = 1 mm. Lower cases indicate in the different slides the main carpological features commented in this work: c, commissure; mr, marginal ribs; pr, primary dorsal ribs; sr, secondary ribs; v, vallecula; cv, commissural vitta; vv, vallecular vitta; vb, vascular bundles. Dash lines in figures C and O depicts the break of fruit layers due to manipulation. For voucher information see Table 1. Species are provided in alphabetical order. A. Ammi majus. B. Anethum foeniculoides. C. Anethum graveolens, arrow depicts the vascular bundles within a broken winged marginal rib. D. Apium anuum. E. Apium graveolens. F. Deverra aphylla. G. Deverra denudata. H. Deverra intermedia. I. Foeniculum vulgare (A. Aparicio & J. G. Rowe s.n., MA). J. Naufraga balearica, arrow depicts commissural vascular bundles. K. Petroselinum crispum, arrow depicts an accessorial vitta (E. San Miguel ESM278, MA). L. Pseudoridolfia fennanei (paratype J. Mathez 6979ter, MPU). M. Ridolfia
FIGURE 3 in Taxonomy of the tribe Apieae (Apiaceae) revisited as revealed by molecular phylogenies and morphological characters
FIGURE 3. Mericarps of species representing of all the genera of tribe Apieae (except Billburttia). Pictures represent the adaxial view of a single mericap unless specified otherwise. A. Foeniculum vulgare. B. Anethum foeniculoides, C. Anethum graveolens. D. Naufraga balearica (two mericarps on the pedicelle). E. Petroselinum crispum (lateral view). F. Ridolfia segetum. G. Ammi majus. H. Stoibrax involucratum. I. Apium graveolens. J. Apium annuum. K. Pseudoridolfia fennanei. L. Stoibrax dichotomum. M. Seseli webbii. N. Sclerosciadium nodiflorum. O. Deverra denudata. P. Deverra aphylla (two mericarps kept together).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.