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FIGURE 7 in Molecular and morphological identification of pistachio armored scale insects (Hemiptera: Diaspididae), with description of a new species
FIGURE 7. Fifty percent majority rule consensus tree resulting from Bayesian analysis of the 28S rDNA dataset. Numbers above branches are posterior probability and likelihood as well as parsimony bootstrap values, respectively. Values <50 % are not shown.
FIGURES 1–3 in Redescription of Leptus kattikus Haitlinger, 2009 (Actinotrichida, Parasitengona, Erythraeidae) and molecular identification of its host from DNA barcoding
FIGURES 1–3. Leptus kattikus: 1. Chelicera; 2. Details of palp tibia and palp tarsus; 3. Details of scutum.
FIGURES 9–11. Leptus kattikus. 9. Leg I in Redescription of Leptus kattikus Haitlinger, 2009 (Actinotrichida, Parasitengona, Erythraeidae) and molecular identification of its host from DNA barcoding
FIGURES 9–11. Leptus kattikus. 9. Leg I (trochanter–tarsus); 10. Leg II (trochanter–tarsus); 11. Leg III (trochanter–tarsus).
FIGURE 1 in First molecular identification of Australapatemon burti (Miller, 1923) (Trematoda: Digenea: Strigeidae) from an intermediate host Radix labiata (Rossmaessler) (Gastropoda: Lymnaeidae) in Europe
FIGURE 1. Neighbor joining (NJ) cluster analysis of ITS2 sequences of Australapatemon burti and two other digenean species. Bootstrap values (500 replicates) are shown above the branches. The scale bar shows uncorrected p-distances. The red letters indicate our sequence from Europe.
FIGURE 1 in Molecular approaches for blood meal analysis and species identification of mosquitoes (Insecta: Diptera: Culicidae) in rural locations in southern England, United Kingdom
FIGURE 1. Neighbor Joining (NJ) tree of full-length barcodes (658 bp) for species of mosquitoes. A divergence of>2% is indicative of separate operational taxonomic units. Each specimen is labelled with a species name based on its molecular identification. BF refers to the alphanumeric number given to the blood-fed samples. Bootstrap values higher than 80% are only shown in the tree on each node.
FIGURE 2 in Morphological and molecular identification of a new species of Fulvoderma (Hymenochaetaceae, Basidiomycota) from the Yunnan-Guizhou Plateau, China
FIGURE 2. Maximum Parsimony strict consensus tree illustrating the phylogeny of Fulvoderma yunnanense and related species in the genus Fulvoderma based on ITS sequences. Branches are labelled with maximum likelihood bootstrap values ≥ 70%, parsimony bootstrap values ≥ 50% and Bayesian posterior probabilities ≥ 0.95, respectively, S cale bar = 20. The new species are in bold.
FIGURE 4 in Morphological and molecular identification of a new species of Fulvoderma (Hymenochaetaceae, Basidiomycota) from the Yunnan-Guizhou Plateau, China
FIGURE 4. Microscopic structures of Fulvoderma yunnanense (drawn from the holotype, CLZhao 10854). A. Basidiospores; B. Basidia and basidioles; C. Cystidia; D. Hyphae from context; E. Hymenium and hyphae from trama. Bars: A = 5 μm; B–E = 10 μm. Drawings by: Jia-Jin Li.
FIGURE 1 in Morphological and molecular identification of a new species of Fulvoderma (Hymenochaetaceae, Basidiomycota) from the Yunnan-Guizhou Plateau, China
FIGURE 1. Maximum Parsimony strict consensus tree illustrating the phylogeny of Fulvoderma yunnanense and related genera in the family Hymenochaetaceae based on ITS+nLSU sequences. Branches are labelled with maximum likelihood bootstrap values ≥ 70%, parsimony bootstrap values ≥ 50% and Bayesian posterior probabilities ≥ 0.95, respectively, Scale bar = 20. The new species are in bold.
Fig. 8 in On the southernmost high Andean scorpion species, with the identification of a cryptic new species of Brachistosternus (Bothriuridae) through morphology, molecular data and species distribution models
Fig. 8. Map of central western Argentina showing the known distribution of Brachistosternus diaguita n. sp. (black circles), Brachistosternus montanus (black stars), and Brachistosternus intermedius (black triangles). The "Diaguita" district of the "Altoandina" biogeographical region is depicted in red, the "Cuyano" district of this region is depicted in blue, the "Puna" biogeographical region is depicted in orange, the "Prepuna" district of the "Monte" biogeographical region is depicted in green, and the Septentrional district of this region is depicted in turquoise.
Fig. 7. Brachistosternus diaguita n in On the southernmost high Andean scorpion species, with the identification of a cryptic new species of Brachistosternus (Bothriuridae) through morphology, molecular data and species distribution models
Fig. 7. Brachistosternus diaguita n. sp., A‒C. Telson. a. male, dorsoexternal aspect; B. male, lateral aspect; C. female, lateral aspect; D‒F. Hemipermatophore. D. left hemispermatophore, external aspect; E. left hemispermatophore, internal aspect; F. right hemispermatophore, internal aspect. Scale bars: 1 mm.
Fig. 5. A in On the southernmost high Andean scorpion species, with the identification of a cryptic new species of Brachistosternus (Bothriuridae) through morphology, molecular data and species distribution models
Fig. 5. A. Brachistosternus intermedius, pedipalp chela, male, internal aspect. B–H. Brachistosternus diaguita n. sp. B‒E. Pedipalp chela, male. B. internal aspect, C. dorsal aspect, D. external aspect, E. ventral aspect; F. Pedipalp chela, female, ventro-internal aspect. G. pedipalp patela, male, external aspect; H. pedipalp femur, male, dorsal aspect. Scale bars: 1 mm.
Fig. 6. A‒F. Metasomal segment V. A‒C. Brachistosternus diaguita n in On the southernmost high Andean scorpion species, with the identification of a cryptic new species of Brachistosternus (Bothriuridae) through morphology, molecular data and species distribution models
Fig. 6. A‒F. Metasomal segment V. A‒C. Brachistosternus diaguita n. sp., male. A. ventral aspect; B. dorso-external aspect, C. dorsal aspect; D. Brachistostenus intermedius, male, ventral aspect; E‒F. Brachistosternus montanus, male, E. dorsoexternal aspect, F. dorsal aspect. Scale bars: 1 mm.
Fig. 3 in On the southernmost high Andean scorpion species, with the identification of a cryptic new species of Brachistosternus (Bothriuridae) through morphology, molecular data and species distribution models
Fig. 3. Potential distribution of Brachistosternus species studied in this contributions A. Brachistosternus diaguita n. sp. B. Brachistosternus montanus. C. Brachistosternus intermedius. Warmer colors show areas with better predicted conditions. Black dots show the presence locations.
Fig. 2. A in On the southernmost high Andean scorpion species, with the identification of a cryptic new species of Brachistosternus (Bothriuridae) through morphology, molecular data and species distribution models
Fig. 2. A. Bayesian phylogeny of selected Brachistosternus species inferred using MrBayes. The values at the nodes are Bayesian posterior probabilities. The scale bar represents the branch lengths in substitutions per site. B. Bayesian species tree with nodeage estimates inferred using *BEAST. The values at the nodes are Bayesian posterior probabilities and the node bars represent the 95% highest posterior densities of the node age estimates. The scale axis is set to show Million years before present.
Identification of Potential IL4I1 Inhibitors through Structure-Based Virtual Screening and Molecular Dynamics Simulations, Molecular dynamics trajectory file
<p>Dataset for molecular dynamics simulations of the article: Identification of Potential IL4I1 Inhibitors through Structure-Based Virtual Screening and Molecular Dynamics Simulations.</p> <p><a href="../api/records/10473570/draft/files/First_600ns_MD.rar/content" target="_blank" rel="noopener noreferrer">First_600ns_MD.rar</a> contains the 600ns molecular dynamics simulation trajectory file of IL4I1-FAD-CIT complex using desmond.</p> <p><a href="../api/records/10473570/draft/files/Second_500ns_MD_ZL35_F963.rar/content" target="_blank" rel="noopener">Second_500ns_MD_ZL35_F963.rar </a>contains the 500ns molecular dynamics simulation trajectory file of IL4I1-FAD-ZL35 complex, which initial conformation of this part of dynamics simulation was obtained by docking the conformation of the 963rd frame from the first dynamics simulation with ZL35 through induced fit.</p> <p>script.rar include scripts and calculation methods for free energy landscape, RMSD matrix, and thermol MM/GBSA.</p>
Systematic Identification of Needlefish (Belonidae) Species using Molecular Genetic and Morphological Markers in the Mediterranean and Black Seas
<p><span>In this study, we aimed to clarify the taxonomic status of Belonidae species distributed in the Mediterranean Sea and the Black Sea by conducting detailed genetic and morphological markers. A total of 550 needlefish samples were caught between January 2022 and January 2024.<span> </span>The data set used in the study contains a total of 171 sequences for the <em>COI</em> gene and 120 sequences for the <em>12s rRNA</em> gene from different Belonidae species, including data from GenBank. Systematic analysis of needlefish species was investigated by using sequencing of mtDNA <em>COI</em> and <em>12s rRNA</em> gene regions and morphological characters in the Turkish Marine Waters. A separate analysis of the two mitochondrial genes supported by morphological characters revealed that each species is grouped within itself. The genetic and morphological analyses showed that <em>Belone belone acus</em> and <em>Belone belone euxini</em> which are considered as the subspecies of <em>Belone belone</em> are not subspecies of the genus <em>Belone</em> and should be considered at the species level, <em>Belone belone</em>.<span> </span><em>Belone svetovidovi</em> is also considerably different from <em>Belone belone</em> and should be considered as a different species. <em>T. acus imperialis</em>, which is thought to be distributed in the Mediterranean Sea, is not a subspecies of <em>Tylosorus acus and should be revised as Tylosorus imperialis </em><span>which genetically </span>differs from<em> Tylosorus acus </em>and also other<em> Tylosorus </em><span>species</span><em> </em>at the species level<em>. </em></span></p>
Low-coverage whole-genome sequencing reveals molecular markers for spawning season and sex identification in Gulf of Maine Atlantic cod (Gadus morhua, Linnaeus 1758)
<p class="CxSpFirst">Atlantic cod (<i>Gadus morhua</i>,<i> </i>Linnaeus 1758) in the western Gulf of Maine are managed as a single stock despite several lines of evidence supporting two spawning groups (spring and winter) that overlap spatially, while exhibiting seasonal spawning isolation. Low-coverage whole genome sequencing was used to evaluate the genomic population structure of Atlantic cod spawning groups in the western Gulf of Maine and Georges Bank using 222 individuals collected over multiple years. Results indicated low total genomic differentiation, while also showing strong differentiation between spring and winter spawning groups at specific regions of the genome. Guided regularized random forest and ranked <i>F</i><sub>ST</sub> methods were used to select panels of single nucleotide polymorphisms (SNPs) that could reliably distinguish spring and winter-spawning Atlantic cod (88.5% assignment rate), as well as males and females (95.0% assignment rate) collected in the western Gulf of Maine. These SNP panels represent a valuable tool for fisheries research and management of Atlantic cod in the western Gulf of Maine that will aid investigations of stock production and support accuracy of future assessments.</p>
FIGURE 1 in Morphological and molecular identification of Ellipsoidisporodochium gen. nov. (Tubakiaceae, Diaporthales) in Hainan Province, China
FIGURE 1. Phylogram of Tubakiaceae based on combined ITS, LSU, tef1, tub2 and rpb2 genes. The BI and ML bootstrap support values above 0.50 BYPP and 60 % are shown at the first and second position above nodes. Strains from the current study are in red. Some branches were shortened to fit them to the page – these are indicated by two diagonal lines with the number of times a branch was shortened indicated next to the lines.
FIGURE 2 in Morphological and molecular identification of Ellipsoidisporodochium gen. nov. (Tubakiaceae, Diaporthales) in Hainan Province, China
FIGURE 2. Ellipsoidisporodochium photiniae (SAUCC 210421). a Leaves of host plant. b Surface of colony after 15 days on PDA. c Reverse of colony after 15 days on PDA. d Conidiomata sporulating on PDA margin. e–g Conidiogenous cells with developing conidia. h–i Conidia. Scale bars = 10 μm (e–i).
FIGURE 4 in Molecular and morphological identification of frog species collected at Rara Lake in Rara National Park, Nepal
FIGURE 4. The adult male specimen of Paa cf. ercepeae (NHM 17A-0120). (A–F) specimen in preservative; (A & D) dorsal view; (C & E) ventral view; (B) frontal view; (F) left foot.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.