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13,499 results for “researcher”
Hyperspectral imagery Research Products - Toulouse urban area 2015 (French ANR HYEP project)
<p>The HYEP project (ANR 14-CE22-0016-01) main goal was to propose a panel of methods and processes designed for hyperspectral imaging, which specificity makes a weighty auxiliary for the monitoring of the elements of the urban area. The main results of the project can be found at</p> <ul> <li><a href="http://doi.org/10.1080/01431161.2017.1410247">G. Roussel, C. Weber, X. Briottet and X. Ceamanos, "Comparison of two atmospheric correction methods for the classification of spaceborne urban hyperspectral data depending on the spatial resolution", International Journal of Remote Sensing, vol. 39(5), pp. 1593-1614, 2018.</a></li> <li><a href="http://doi.org/10.1109/ECMSM.2017.7945884">F. Z. Benhalouche, M. S. Karoui, Y. Deville, I. Boukerch, A. Ouamri, ``Multi-sharpening hyperspectral remote sensing data by multiplicative joint-criterion linear-quadratic nonnegative matrix factorization'', Proceedings of the 2017 IEEE International Workshop on Electronics, Control, Measurement, Signals and their application to Mechatronics (ECMSM 2017), May 24-26, 2017, Donostia - San Sebastian</a></li> <li><a href="https://hal-amu.archives-ouvertes.fr/hal-01903469">Gintautas Mozgeris, Vytaut ̇e Juodkien ̇e, Donatas Jonikaviˇcius, Lina Straigyt ̇e, S ́ebastien Gadal, and Walid Ouerghemmi. Ultra-Light Aircraft-Based Hyperspectral and Colour-Infrared Imaging to Identify Deciduous Tree Species in an Urban Environment. Remote Sensing, 10(10), October 2018.</a></li> <li><a href="https://hal.archives-ouvertes.fr/hal-02281003">Christiane Weber, Thomas Houet, S ́ebastien Gadal, Rahim Aguejdad, Grzegorz Skupinski, Yannick Deville, Jocelyn Chanussot, Mauro Dalla Mura, Xavier Briottet, Cl ́ement Mallet, and Arnaud Le Bris. HYEP HYperspectral imagery for Environmental urban Planning : principaux résultats. In 7ème colloque scientifique du groupe SFPT-GH, Toulouse, France, July 2019. ONERA - SFTP.</a></li> <li><a href="https://hal-amu.archives-ouvertes.fr/hal-01852844">Christiane Weber, Rahim Aguejdad, Xavier Briottet, Josselin Aval, Sophie Fabre, Jean Demuynck, Emmanuel Zenou, Yannick Deville, Moussa Sofiane Karoui, Fatima Zohra, Sébastien Gadal, Walid Ouerghemmi, Clément Mallet, Arnaud Le Bris, and Nesrine CHEHATA. Hyperspectral Imagery for Environmental Urban Planning. In IEEE International Geoscience and Remote Sensing Symposium (IGARSS) 2018, pages 1628–1631, Valencia, Spain, July 2018a. IEEE.</a></li> <li><a href="https://hal.archives-ouvertes.fr/hal-01854904">Christiane Weber, Rahim Aguejdad, X Briottet, J Avala, S. Fabre, J Demuynck, E Zenou, Y. Deville, M. Karoui, F Z Benhalouche, S Gadal, W Ourghemmi, C. Mallet, A. Le Bris, and N. Chehata. HYPERSPECTRAL IMAGERY FOR ENVIRONMENTAL URBAN PLANNING. In IGARSS 2018, Valencia, Spain, 2018b. </a></li> <li><a href="http://doi.org/10.5194/isprs-archives-XLII-1-W1-167-201">W. Ouerghemmi, A. Le Bris, Nesrine CHEHATA, and Clément Mallet. A two-step decision fusion strategy: application to hyperspectral and multispectral images for urban classification. In International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, volume XLII-1/W1, pages 167–174, Hanover, Germany, May 2017. Copernicus GmbH (Copernicus Publications).</a></li> <li><a href="https://hal.inria.fr/hal-02384455">Christiane Weber, Sébastien GADAL, Xavier Briottet, and Clément Mallet. Apport de l’imagerie hyperspectrale pour la planification urbaine. In Karine Emsellem, Diego Moreno, Christine Voiron-Canicio, and Didier Josselin, editors, SAGEO 2016 - Spatial Analysis and Geomatics, Actes de la conférence SAGEO’2016 - Spatial Analysis and GEOmatics, pages 454–462, Nice, France, December 2016. </a></li> <li><a href="https://hal-amu.archives-ouvertes.fr/hal-01359643">Gintautas Mozgeris, S ́ebastien Gadal, Donatas Jonikaviˇcius, Lina Straigyte, Walid Ouerghemmi, and Vytaut ̇e Juodkiene. Hyperspectral and color-infrared imaging from ultra-light aircraft: Potential to recognize tree species in urban environments. In University of California Los Angeles, editor, 8th Workshop in Hyperspectral Image and Signal Processing: Evolution in Remote Sensing, pages 542–546, Los Angeles, United States, August 2016.</a></li> <li><a href="https://hal.inria.fr/hal-02384458">Alexandre Hervieu, Arnaud Le Bris, and Cl ́ement Mallet. Fusion of hyperspectral and VHR multispectral image classifications in urban α–areas. In ISPRS Annals of Photogrammetry, Remote Sensing and Spatial Information Sciences, volume III-3, pages 457–464, Prague, Czech Republic, July 2016.</a></li> <li><a href="https://hal.archives-ouvertes.fr/hal-01888126">Christiane Weber, Thomas Houet, Sebastien GADAL, Rahim Aguejdad, Grzegorz Skupinski, Aziz Serradj, Yannick Deville, Jocelyn Chanussot, Mauro Dalla Mura, Xavier Briottet, Clément Mallet, and Arnaud Le Bris. ANR HYEP ANR 14-CE22-0016-01Hyperspectral imagery for Environmental urban Planning HyepProgramme Mobilité et systèmes urbains 2014. Research report, CNRS UMR TETIS, ESPACE, LETG ; ONERA ; GIPSA-lab ; IRAP ; IGN, October 2018c. </a></li> <li><a href="https://doi.org/10.1080/01431161.2019.1579937">Josselin Aval, Sophie Fabre, Emmanuel Zenou, David Sheeren, Mathieu Fauvel & Xavier Briottet (2019) Object-based fusion for urban tree species classification from hyperspectral, panchromatic and nDSM data, International Journal of Remote Sensing, 40:14, 5339-5365, DOI: 10.1080/01431161.2019.1579937 </a></li> <li><a href="https://doi.org/10.3390/rs11111269">Charlotte Brabant, Emilien Alvarez-Vanhard, Achour Laribi, Gwenaël Morin, Kim Thanh Nguyen et al. Comparison of Hyperspectral Techniques for Urban Tree Diversity Classification Remote Sensing, MDPI, 2019, 11 (11), pp.1269. ⟨10.3390/rs11111269⟩ hal-02191084v1 </a></li> <li><a href="https://hal.archives-ouvertes.fr/halshs-02191363v1">C. Brabant, Emilien Alvarez-Vanhard, Gwenaël Morin, Thanh Ngoc Nguyen, Achour Laribi et al. Evaluation of dimensional reduction methods on urban vegetation classification performance using hyperspectral data IGARSS 2018, Jul 2018, Valencia, Spain halshs-02191363v1</a></li> <li><a href="https://hal.archives-ouvertes.fr/halshs-02191097v1">Charlotte Brabant, Emilien Alvarez-Vanhard, Thomas Houet. Improving the classification of urban tree diversity from Very High Spatial Resolution hyperspectral images: comparison of multiples techniques Joint Urban Remote Sensing Event (JURSE 2019), May 2019, Vannes, France halshs-02191097v1</a></li> </ul> <p>This Dataset contains five research outputs of this project that were produced on the basis of Hyperspectral data obtained during an acquisition campaign led on Toulouse (France) urban area on July 2015 using Hyspex instrument which provides 408 spectral bands spread over 0.4 – 2.5 μ. Flight altitude lead to 2 m spatial resolution images.</p> <ul> <li><strong>Fields_samples.7z: </strong> ESRI Shape Format. Supervised SVN classification results for 600 urban trees according to a 3 level nomenclature: leaf type (5 classes), family (12 & 19 classes) and species (14 & 27 classes). The number of classes differ for the two latter as they depend on the minimum number of individuals considered (4 and 10 individuals per class respectively). Trees positions have been acquired using differential GPS and are given with centimetric to decimetric precision. A randomly selected subset of these trees has been used to train machine SVM and Random Forest classification algorithms. Those algorithms were applied to hyperspectral images using a number of classes for family (12 & 19 classes) and species (14 & 27 classes) levels defined according to the minimum number of individuals considered during training/validation process (4 and 10 individuals per class, respectively). Global classification precision for several training subsets is given by Brabant et al, 2019 (<a href="https://www.mdpi.com/470202">https://www.mdpi.com/470202</a>) in terms of averaged overall accuracy (AOA) and averaged kappa index of agreement (AKIA).</li> <li><strong>HySPex-2m.7z: </strong>full hyperspectral VNIR-SWIR ENVI standard image obtained from the coregistration of both VNIR and SWIR ones through a signal aggregation process that allowed to obtain a synthetic VNIR 1.6 m spatial resolution image, with pixels exactly corresponding to natif SWIR image ones. First, a spatially resampled 1.6 m VNIR image was built, where output pixel values were calculated as the average of the VNIR 0.8 m pixel values that spatially contribute to it. Then, ground control points (GCP) were selected over both images and SWIR one was tied to the VNIR 1.6 m image using a bilinear resampling method using ENVI tool. This lead to a 1.6 m spatial resolution full VNIR-SWIR image.</li> <li><strong>HYPXIM-4m.7z, HYPXIM-8m.7z, Sentinel2-10m.7z</strong>: hyperspectral ENVI standard simulated images. Spatial and spectral configurations generated correspond to ESA SENTINEL-2 instrument that was lunched on 2015, and HYPXIM sensor which was under study at that time. </li> </ul>
SSHOC - National Gallery - Raphael Research Resource CIDOC CRM Mapped Dataset
<p>In 2007 the <a href="https://cima.ng-london.org.uk/documentation">Raphael Research Resource</a> project began to examine how complex conservation, scientific and art historical research could be combined in a flexible digital form. Exploring the presentation of interrelated high resolution images and text, along with how the data could be stored in relation to an event driven ontology in the form of <a href="http://www.w3.org/TR/rdf-concepts/">RDF triples</a>. The original <a href="https://cima.ng-london.org.uk/documentation">main user interface</a> is still live, In 2021/21 as part of the <a href="https://www.sshopencloud.eu/">SSHOC Project</a> the raw data stored within the system was mapped to the <a href="https://www.cidoc-crm.org/">CIDOC CRM</a> using a custom set of Python scripts (<a href="https://doi.org/10.5281/zenodo.6461654">https://doi.org/10.5281/zenodo.6461654</a>). The SSHOC work aimed to make this data more <a href="https://www.go-fair.org/fair-principles/">FAIR</a> so in addition to mapping it to a standard ontology, to increase Interoperability, it has also been made available in the form of <a href="http://en.wikipedia.org/wiki/Linked_Data">open linkable data</a> combined with a <a href="http://en.wikipedia.org/wiki/SPARQL">SPARQL</a> end-point. This live data presentation can been found <a href="https://rdf.ng-london.org.uk/sshoc/">Here</a>.</p> <p>This deposit contains the CIDOC-CRM mapped data formatted in XML and an example model diagram representing some of the key relationships covered in the data-set.</p>
A controlled vocabulary for research and innovation in the field of Artificial Intelligence (AI)
<p><strong>A controlled vocabulary for research and innovation in the field of Artificial Intelligence (AI)</strong></p> <p>This controlled vocabulary of keywords related to the field of Artificial Intelligence (AI) was built by SIRIS Academic in collaboration with ART-ER (the R&I and sustainable development in-house agency of the Emilia-Romagna region in Italy) and the Generalitat de Catalunya (the regional government of Catalonia, Spain), in order to identify AI research, development and innovation activities. The work was carried out by consulting domain experts' advice and it was ultimately applied to inform regional strategies on AI and research and innovation policy.</p> <p>The aim of this vocabulary is to enable one to retrieve texts (e.g. R&D projects and scientific publications) featuring the concepts included in the present vocabulary in their titles and abstracts, assuming that these records have a certain contribution of applications, techniques and issues, in the domain of AI.</p> <p>The present effort was carried out because, despite the high number of contributions and technological developments in the field of AI, there is no closed or static vocabulary of concepts that allows to unequivocally define the boundaries of what should be considered “an Artificial Intelligence intellectual product” (or what should not). Indeed, the literature presents different definitions of the domain, with visions that could be contradictory. AI encompasses today a wide variety of subdomains, ranging from general purpose areas such as learning and perception to more specific ones such as autonomous vehicle driving, theorem proving, or industrial process monitoring. AI synthesises and automates intellectual tasks, and is therefore potentially relevant to any area of human intellectual activity. In this sense, it is a genuinely universal and multidisciplinary field. AI draws upon disciplines as diverse as cybernetics, mathematics, philosophy, sociology and economics.</p> <p>As a ground for the construction of the AI controlled vocabulary, an initial set of concepts was taken from different subdomains of the <em>ACM Computing Classification System 2012, </em> to define the boundaries of the AI domain. Notably, although some relevant AI subdomains have an independent category in the ACM taxonomy outside of AI, they have been included in the list of subdomains. In order to align the ACM taxonomical definition with the Catalan Strategy of AI, <em>CATALONIA.AI</em>, in <em>version 1 </em>of this resource the emerging area of AI Ethics was included in the vocabulary, while some other categories which are not relevant for the objectives were removed from the subdomains list. In the current <em>version 2</em>, the classification and the labels of the subdomains have been revised because of the evolution of the field. Some fields have been grouped in order to reduce the overlap between subdomains and to provide a taxonomy that makes more sense for the analysis of R&I ecosystems. </p> <p>The different subdomains in the versions are presented in the following table:</p> <table> <tbody> <tr> <td><strong>Version </strong></td> <td><strong>Subdomains</strong></td> </tr> <tr> <td> <p><em>Version 2</em></p> </td> <td> <p>(1) Machine learning and deep learning; (2) Computer Vision; (3) Natural Language Processing and speech recognition; (4) Intelligent agents, planning, scheduling, problem-solving, control methods, and search; (5) Expert Systems, Knowledge representation and reasoning; (6) AI Ethics.</p> </td> </tr> <tr> <td><em>Version 1</em></td> <td>(1) General, (2) Machine Learning, (3) Computer Vision, (4) Natural Language Processing, (5) Knowledge Representation and Reasoning, (6) Distributed Artificial Intelligence, (7) Expert Systems, Problem-Solving, Control Methods and Search and (8) AI Ethics.</td> </tr> </tbody> </table> <p>Although a keyword rule-based approach suffers from the major shortcomings of not capturing all the lexical and linguistic variants of specific concepts nor the context of the words - namely, keyword-based approaches would miss relevant texts if the specific pattern is not matched during the search - the present vocabulary allowed us to obtain fairly good results, due to the specificity of the concepts describing the AI domain. Furthermore, an understandable and transparent controlled vocabulary allows a better control of the final results and the final definition of the domain borders. Also, a plain list of terms allows a much easier and interactive engagement of interested stakeholders with different degrees of knowledge (such as, for instance, domain experts, policy-makers and potential users) who can make use of vocabulary to retrieve pertinent literature or to enrich the resource itself.</p> <p>The vocabulary has been built taking advantage of advanced language models and resources from knowledge datasets such as arXiv, DBpedia and Wikipedia. The resulting vocabulary comprises 833 keywords, and has been validated by experts from several universities in Emilia-Romagna and Catalonia.</p> <p>The <em>version 0.5</em> of this resource was developed by the SIRIS Academic in 2019 in collaboration with ART-ER, Emilia-Romagna (Quinquillá et <em>al.</em>, 2020), the <em>version 1 </em>was the result of an update done in 2020 in collaboration with the Generalitat de Catalunya, and the current version (<em>version 2</em>) has resulted in 2021 from the collaboration with ART-ER and the integration of an additional set of keywords provided by the <em>Artificial Intelligence and Intelligence Systems (AIIS)</em> Laboratory of the CINI (<em>Consorzio interuniversitario nazionale per l’informatica </em>based in Rome, Italy).</p> <p>The methodology for the construction of the controlled vocabulary is presented in the following steps:</p> <ol> <li> <p>An initial set of scientific publications was collected by retrieving the following records as a weakly-supervised (in the sense that records are linked to AI by their taxonomy and not by a manual label) dataset in the domain of Artificial Intelligence :</p> <ol> <li> <p>Publications from Scopus with the keyword “Artificial Intelligence”</p> </li> <li> <p>Publications from arXiv in the category “Artificial Intelligence”</p> </li> <li> <p>Publications in relevant journals in the scientific domain of “Artificial Intelligence”</p> </li> </ol> </li> <li> <p>An automated algorithm was used to retrieve, from the APIs of DBpedia, a series of terms that have some categorical relationships (i.e. those that are indexed as “sub-categories of”, “equivalent to”, among other relations in DBpedia) with the Artificial Intelligence concept and with the AI categories in the ACM taxonomy. The DBpedia tree has been exploited down to the level 3, and the relevant categories have been manually selected (for instance: <em>Classification algorithms</em>,<em> Machine learning</em> or <em>Evolutionary computation</em>) and others were ignored (for instance: <em>Artificial intelligence in fiction</em>, <em>Robots</em> or <em>History of artificial intelligence</em>) because they were not relevant, or not specifically in the domain.</p> </li> <li> <p>The keywords in publications in the dataset were extracted from the keyword sections and from the abstracts. The keywords with a higher <em>TF-IDF</em>, using an <em>IDF</em> matrix in the open domain, have been selected. The co-occurrence of keywords with categories in specific AI subdomain and a clusterization of the main keywords has been used for a categorization of the keywords at the thematic level.</p> </li> <li> <p>This list of keywords tagged by thematic category has been manually revised, removing the non-pertinent keywords and changing the wrong categorizations by fields.</p> </li> <li> <p>The weak-supervised dataset in the domain of Artificial Intelligence is used to train a Word2Vec (Mikolov <em>et al.</em>, 2013) word embedding model (a machine learning model based on neural networks).</p> </li> <li> <p>The terms’ list is then enriched by means of automatic methods, which are run in parallel: </p> <ol> <li> <p>The trained Word2Vec model is used to select, among the indexed keywords of the reference corpus, all terms “semantically close” to the initial set of words. This step is carried out to select terms that might not appear in the texts themselves, but that were deemed pertinent to label the textual records.</p> </li> <li> <p>Further, terms that are mentioned in the texts of the reference corpus and that are valued by the trained Word2Vec model as “semantically close” to the initial set of words are also retained. This step is performed to include in the controlled vocabulary a series of terms that are related to the focus of the SDGs and which are used by practitioners.</p> </li> </ol> </li> <li> <p>The final list produced by steps 2-6 is manually revised.</p> </li> </ol> <p> </p> <p>The definition of the vocabulary does not, per se, allow to identify STI contributions to AI: this activity in fact boils down to actually matching the terms in the controlled vocabulary to the content of the gathered STI textual records. To successfully carry out this task, a series of pattern matching rules must be defined to capture possible variants of the same concept, such as permutations of words within the concept and/or the presence of null words to be skipped. For this reason, we have carefully crafted matching rules that take into account permutations of words and that allow words within concept to be within a certain distance. Some relatively ambiguous keywords (which may match unwanted pieces of text), have a set of associated “extra” terms. These “extra” terms are defined as further terms that must co-appear, in the same sentence, together with their associated ambiguous keywords.</p> <p>Finally, each keyword in the vocabulary was assigned one or more AI subdomains, so that the vocabulary can also be used to tag collections of texts within narrower AI sub-domains. In order to complement the alignment between keywords and subdomains, a set of subdomain-specific keywords have been defined to better capture the scope of the subdomains. These allow better characterization of subdomains that are more difficult to define only by means of unambiguous specific concepts, or that overlap with the wide “machine learning” subdomain (example: machine learning applied to object recognition or text translation). The alignment between keywords and subdomains, and these keyword lists of each subdomain, have been applied to capture AI subdomains in research outputs. Through this classification process, we have identified projects and publications related to AI, with a focus on mapping the research competencies in the AI domain in Emilia-Romagna. The resulting research records have been reviewed by experts in the domain, given the occurrence of some false positives, which have been used to improve the approach.</p> <p>The final controlled vocabulary has been evaluated with an external test set, proposed by (Dunham <em>et al.,</em> 2020). The test set consists of the abstract of 10,606 papers published in the arXiv repository, of which 1,076 within the Artificial Intelligence subcategories and 9,530 in arXiv categories other than Artificial Intelligence. Evaluating the controlled vocabulary on this data set, we observe accuracy of .94. However, because the pertinence of these publications to the field of AI is based solely on their taxonomic classification (i.e., on whether they are classified in the arXiv within Artificial Intelligence and not on a manual labelling), this evaluation can only yield an orientative performance assessment.</p> <p>The version 2 includes new keywords extracted from the (1) re-training of the enrichment pipeline (steps 5-6 in the methodology) considering as initial set of terms the version 1 of the vocabulary on a reference corpus of new publications, and (2) from the flat keywords list provided by the <em>Artificial Intelligence and Intelligence Systems</em> <em>(AIIS)</em> Lab of CINI (Consorzio interuniversitario nazionale per l’informatica). The keywords in (2) have been cleaned by calculating precision and f-measure on the dataset (Dunham et al., 2020), selecting those keywords with the highest scores, and being manually validated a posteriori.</p> <p>The AI controlled vocabulary has been applied in two practical cases, which have the purpose of identifying skills, stakeholders and capabilities, of a specific research ecosystem at the regional level. See the following references:</p> <ul> <li> <p>Quinquillá, Arnau, Duran-Silva, Nicolau, Massucci, Francesco Alessandro, Fuster, Enric, Rondelli, Bernardo, Bologni, Leda, … Moretti, Giorgio. (2020). Text mining to identify skills, stakeholders and capabilities: the case of Artificial Intelligence in Emilia-Romagna. Zenodo. <a href="http://doi.org/10.5281/zenodo.3606342">http://doi.org/10.5281/zenodo.3606342</a>. Poster presented at: World Open Innovation Conference 2019 (WOIC); 11th december 2019, Rome, Italy.</p> </li> <li> <p>Bigas, E., Duran, N., Fuster, E., Parra, C., Fernández, T. (2021): “Anàlisi de l’especialització en intel·ligència artificial”. Col·lecció Monitoratge de la RIS3CAT, Generalitat de Catalunya <a href="http://catalunya2020.gencat.cat/web/.content/00_catalunya2020/Documents/estrategies/fitxers/analisi-especialitzacio-intelligencia-artificial.pdf">http://catalunya2020.gencat.cat/web/.content/00_catalunya2020/Documents/estrategies/fitxers/analisi-especialitzacio-intelligencia-artificial.pdf</a></p> </li> </ul> <p> </p> <p><strong>Acknowledgements</strong></p> <ul> <li> <p>Tatiana Fernández (Direcció General de Promoció Econòmica, Competència i Regulació, de la Generalitat de Catalunya), </p> </li> <li> <p>Daniel Marco, Daniel Santanach and Eduard Balbuena (Departament de Polítiques Digitals i Administració Pública, de la Generalitat de Catalunya) </p> </li> <li> <p>Albert Sabater (Observatori d’Ètica en Intel·ligència Artificial i Universitat de Girona)</p> </li> <li> <p>Leda Bologni, Lucia Mazzoni and Giorgio Moretti (Art-ER)</p> </li> <li> <p>Prof. RIta Cucchiara and Dr. Lorenzo Baraldi (Università degli Studi di Modena e Reggio Emilia)</p> </li> <li> <p>Artificial Intelligence and Intelligence Systems (AIIS) Lab of CINI (Consorzio interuniversitario nazionale per l’informatica)</p> </li> </ul> <p> </p> <p><strong>Bibliography</strong></p> <p>Bigas, E., Duran, N., Fuster, E., Parra, C., Fernández, T. (2021): “Anàlisi de l’especialització en intel·ligència artificial”. Col·lecció Monitoratge de la RIS3CAT, Generalitat de Catalunya <a href="http://catalunya2020.gencat.cat/web/.content/00_catalunya2020/Documents/estrategies/fitxers/analisi-especialitzacio-intelligencia-artificial.pdf">http://catalunya2020.gencat.cat/web/.content/00_catalunya2020/Documents/estrategies/fitxers/analisi-especialitzacio-intelligencia-artificial.pdf</a></p> <p>Dunham, J.W., Melot, J., & Murdick, D. (2020). Identifying the Development and Application of Artificial Intelligence in Scientific Text. ArXiv, abs/2002.07143. Available at: <a href="https://arxiv.org/abs/2002.07143">https://arxiv.org/abs/2002.07143</a></p> <p>Mikolov, Tomas & Corrado, G.s & Chen, Kai & Dean, Jeffrey. (2013). Efficient Estimation of Word Representations in Vector Space. 1-12.</p> <p>Quinquillá, Arnau, Duran-Silva, Nicolau, Massucci, Francesco Alessandro, Fuster, Enric, Rondelli, Bernardo, Bologni, Leda, … Moretti, Giorgio. (2020). Text mining to identify skills, stakeholders and capabilities: the case of Artificial Intelligence in Emilia-Romagna. Zenodo. <a href="http://doi.org/10.5281/zenodo.3606342">http://doi.org/10.5281/zenodo.3606342</a>. Poster presented at: World Open Innovation Conference 2019 (WOIC); 11th december 2019, Rome, Italy.</p>
Research data management for bioimaging: the 2021 NFDI4BIOIMAGE community survey - Extended Data 3 - Raw Data survey entries
<p>This document provides extended, supplementary data and information to the manuscript "Research data management for bioimaging: the 2021 NFDI4BIOIMAGE community survey" by Schmidt C., Hanne J, Moore J, Meesters C, Ferrando-May E, Weidtkamp-Peters S, and members of the NFDI4BIOIMAGE initiative. [version 1; peer review: awaiting peer review] F1000Research 2022, 11:638, https://doi.org/10.12688/f1000research.121714.1</p> <p>This extended data includes:</p> <p>- The raw dataset of survey entries, anonymized (IP addresses and personal comments deleted)</p>
Including Data Management in Research Culture Increases the Reproducibility of Scientific Results
<p><strong>General Information:</strong></p> <p>This dataset contains artifacts related to Riedel et al. (2022) (https://dx.doi.org/10.18420/inf2022_114). Here, we investigate the reproducibility of 108 research papers published between 2017 and 2021 by members of the Collaborative Research Center 1294 – Data Assimilation. To that end, we relate to a previous study by Stagge et al. (2019) that relies on a questionnaire that we extended. </p> <p>The publication by Stagge et al. (2019) is available here: https://doi.org/10.5281/zenodo.2562268<br> The dataset by Stagge et al. (2019) is available here: https://doi.org/10.1038/sdata.2019.30</p> <p>This dataset contains the questionnaire that we used to evaluate the reproducibility of scientific publications, a csv file containing the questionnaire’s answers, and a Jupyter notebook script to evaluate the given data.</p> <p><strong>Run the code:</strong></p> <p>To run the code, you must install Anaconda [1] and then open the jupyter notebook. All necessary libraries are listed in "requirement.txt". </p> <p>Alternatively, you can import the .ipyab file in the colab [2] and run it. </p> <p><br> [1]. https://www.anaconda.com/<br> [2]. https://research.google.com/colaboratory/<br> </p>
Rosalia: An experimental research site to study hydrological processes in a forest catchment - data repository
<p>This repository is a supplement to the paper <strong>Fürst, J., et al. (2021). “Rosalia: an experimental research site to study hydrological processes in a forest catchment.” Earth Syst. Sci. Data 13(8): 4019-4034.</strong></p> <p>Experimental watersheds have a long tradition as research sites in hydrology and have been used as far back as the late 19<sup>th</sup> and early 20<sup>th</sup> century. The University of Natural Resources and Life Sciences Vienna (BOKU) has been operating the experimental research forest site called “Rosalia” with an area of 950 ha since 1875 to support and facilitate research and education. Recently, BOKU researchers from various disciplines extended the “Rosalia” instrumentation towards a full ecological-hydrological experimental watershed. The overall objective is to implement a multi-scale, multi-disciplinary observation system that facilitates the study of water, energy and solute transport processes in the soil-plant-atmosphere continuum.</p> <p>This repository contains the datasets collected by a monitoring network of 4 discharge gauging stations, 7 rain-gauges, together with observations of air and water temperature, relative humidity and conductivity. In four profiles, soil water content and temperature are recorded in different depths. In 2019, additionally a program to collect isotopic data in precipitation and discharge was started. On one site, also Nitrate, TOC and turbidity are monitored. All data collected since 2015, including in total 56 high resolution time series data (10 min sampling interval), are provided to the scientific community.</p>
TRESCA D1.2 Desk Research Documents (Reference List)
<p>Documents selected for further analysis within the secondary research process of Deliverable 1.2 (Science Communication and Policy Trend Report) of the H2020 project TRESCA "Trustworthy, Reliable and Engaging Scientific Communication Approaches".</p>
Research Data Management Lifecycle
<p>The Research Data Management (RDM) lifecycle describes the various phases of a research project from a data management perspective. The Cycle diagram illustrates all the steps with multiple levels of granularity and details. The text free images can be used for other purposes where a cycle diagram is needed.</p>
Evaluation Set - Contributions Similarity in the Open Research Knowledge Graph
<p>This evaluation set has been created for evaluating a content-based recommender system in the context of the Open Research Knowledge Graph (ORKG). The recommender system accepts structured ORKG contribution as input and recommends existing contributions in the ORKG semantically relevant to the given one.</p> <p> </p> <p>The evaluation set is manually annotated based on the <a href="https://www.orkg.org/orkg/featured-comparisons">featured comparisons</a> in the ORKG. In the course of this, it has been distinguished between homogeneous (those who are dissimilar in 2-3 properties) and heterogeneous (otherwise) instances. Multiple annotations have been obtained for the former and exactly one for the latter.</p> <p> </p> <p>It has been also distinguished between "with_response" and "without_response" instances (50 instances for each). The former are those contributions for them the initial version of the contributions similarity service has found similarities and the latter are the opposite case.</p> <p> </p> <p>This evaluation set has been created and applied on a modified version of the contributions similarity service in the context of <a href="https://doi.org/10.15488/11834">this master's thesis</a>. The modified version of the service has simplified the document representation of contributions that are stored in an ElasticSearch index by omitting redundant terms.</p> <p>The evaluation set has the following schema:</p> <pre><code class="language-json">{ "with_response": [ { "contribution_id": "some_id", "comparison_id": "some_id", "comparison_label": "some_label", "contribution_label": "some_label", "paper": "some_id", "research_field": "some_id", "research_problems": [ "some_id" ], "annotations": [ "some_id of a similar contribution", ... ] }, ... ], "without_response": [ ... ] }</code></pre> <p> </p>
Sharing research data and findings relevant to the novel coronavirus (COVID-19) outbreak - Literature sources
<p>The spreadsheet in the present dataset (CSV format) includes the sources considered during the literature review stage for the report: From intent to impact: Investigating the effects of open sharing commitments. Please note that not all sources in this deposit have been referenced in the above-mentioned report and that the report may include additional sources</p>
Sharing research data and findings relevant to the novel coronavirus (COVID-19) outbreak - Survey responses
<p>The spreadsheets in the present dataset (CSV format) include the anonymised responses to our online survey of signatories of the Joint Statement on open research and data sharing. Responses have been split into quantitative responses (i.e., closed survey questions) and qualitative responses (i.e., free text survey questions).</p> <p>This data has been used to inform our final report, which is available in our <a href="https://zenodo.org/communities/data-sharing-in-public-health-emergencies">Zenodo Project Community</a>.</p>
Sharing research data and findings relevant to the novel coronavirus (COVID-19) outbreak - Thematic coding of qualitative research findings
<p>The spreadsheet in the present dataset (CSV format) includes the anonymised thematic coding that has been applied to our interview and literature review findings to inform the preparation of the report: From intent to impact: Investigating the effects of open sharing commitments.</p> <p>The thematic coding has been applied by using <a href="https://www.qsrinternational.com/nvivo-qualitative-data-analysis-software/home">NVivo</a>, a professional qualitative analysis software, and then exported in spreadsheet form for public sharing.</p> <p>Find out more about this project in our dedicated <a href="https://zenodo.org/communities/data-sharing-in-public-health-emergencies">Zenodo project community</a>.</p>
Research data for UCE phylogenomics of sawflies and woodwasps
<p>Input files, scripts and newick tree files for the ongoing project on reconstructing a comprehensive phylogeny and biogeography for sawflies and woodwasps (Hymenoptera). </p>
TRENDS AND PATTERNS OF RESEARCH PUBLICATIONS AT KYAMBOGO UNIVERSITY BETWEEN 2003 TO 2020
<p>Data for the study was sourced from: Google Scholar, Emerald, Ebscohost, Taylor and Francis and Kyambogo University Scholars’ Space. This took place between June 2019 and June 2020. Data sourced was based on two specific criteria: having acknowledged to being a staff member of the University and having published within the period 2003 to 2020.</p>
Open Science and Authorship of Supplementary Material for the MES research community
<p>This spreadsheet contains the data and the results from the analysis described in the paper "Open Science and Authorship of Supplementary Material. Evidence from a Research Community." being accepted at STI 2022.</p>
Numerical data analysed to produce Figure 3a of Nature Climate Change submission "Five challenges for subseasonal to decadal prediction research " by Merryfield et al.
<p>NetCDF4-formatted files containing daily sea ice concentration data from Environment and Climate Change Canada's CanSIPSv2 seasonal forecasting system described in Lin et al. (2020) https://doi.org/10.1175/WAF-D-19-0259.1 </p> <ul> <li>2 models, CanCM4i and GEM-NEMO</li> <li>10 ensemble members for each model, each in separate files as indicated by suffixes _1 to _10</li> <li>initialized May 1, 1980 to 2021</li> <li>840 files total (42 predicted years x 10 ensemble members x 2 models)</li> <li>model outputs interpolated to common 1-degree grid</li> </ul> <p>The calibrated probabilistic forecast map shown in Figure 3a is based on the nonhomogeneous censored Gaussian regression (NCGR) method described in Dirkson et al, (2021) https://doi.org/10.1175/WAF-D-20-0066.1 and produced using scripts available at https://github.com/adirkson/sea-ice-timing </p> <p>The procedure uses as inputs</p> <ul> <li>freeze-up dates calculated from the provided model outputs as described in Sigmond et al. (2016) https://doi.org/10.1002/2016GL071396</li> <li> <p>NOAA/NSIDC Climate Data Record of Passive Microwave Sea Ice Concentration, Version 3: https://nsidc.org/data/G02202/versions/3</p> </li> </ul>
Annex 1 – Actions and measures relevant to research integrity matched to the UK Concordat
<p>The present dataset is an Annex to the Discussion Document entitled “<a href="https://doi.org/10.5281/zenodo.6827947">Indicators of Research Integrity: An initial exploration of the landscape, opportunities and challenges</a>”. </p> <p>It consists in a longlist of actions and measures that organisations may put in place to support research integrity, building on a set of documents that we considered to represent the perspectives of the stakeholder groups mentioned in the UK Concordat to Support Research Integrity, including: </p> <ul> <li> <p>researchers; </p> </li> <li> <p>employers of researchers (i.e. bodies that conduct or host research; employ, support or host researchers; teach research students; or allow research to be carried out under their auspices); </p> </li> <li> <p>research funders; and </p> </li> <li> <p>other organisations (e.g. professional, statutory and regulatory bodies; academies and learned societies; professional and subject-specific representative bodies; journals and publishers; and organisations offering advice, guidance and support). </p> </li> </ul> <p>The table below provides an overview of the documents covered in the dataset. It should be noted that our selection of documents is not meant to imply that other efforts are of lesser importance: it is only a starting point for discussion and seeks to represent a breadth of stakeholder views. </p> <table> <tbody> <tr> <td> <p>Document </p> </td> <td> <p>Lead </p> </td> <td> <p>Main perspective(s) </p> </td> </tr> <tr> <td> <p><a href="https://ukrio.org/wp-content/uploads/UKRIO-Self-Assessment-Tool-for-The-Concordat-to-Support-Research-Integrity-V2.pdf">UKRIO Self-Assessment Tool for The Concordat to Support Research Integrity</a> </p> </td> <td> <p>UK Research Integrity Office (UKRIO) </p> </td> <td> <p>Employers of researchers </p> </td> </tr> <tr> <td> <p><a href="https://doi.org/10.1371/journal.pbio.3000737">The Hong Kong Principles for assessing researchers: Fostering research integrity</a> </p> </td> <td> <p>Moher et al. (academic article) </p> </td> <td> <p>Researchers, Employers of researchers, Research funders </p> </td> </tr> <tr> <td> <p><a href="https://www.vitae.ac.uk/vitae-publications/reports/research-integrity-a-landscape-study">Research integrity: a landscape study</a> </p> </td> <td> <p>UK Research and Innovation (UKRI), Vitae, UK Research Integrity Office (UKRIO), UK Reproducibility Network (UKRN) </p> </td> <td> <p>All stakeholders </p> </td> </tr> <tr> <td> <p><a href="https://wellcome.org/reports/what-researchers-think-about-research-culture">What Researchers Think About the Culture They Work In</a> </p> </td> <td> <p>Wellcome </p> </td> <td> <p>Researchers, Employers of researchers, Research funders </p> </td> </tr> <tr> <td> <p><a href="https://www.allea.org/wp-content/uploads/2017/05/ALLEA-European-Code-of-Conduct-for-Research-Integrity-2017.pdf">The European Code of Conduct for Research Integrity</a> </p> </td> <td> <p>All European Academies (ALLEA) </p> </td> <td> <p>All stakeholders </p> </td> </tr> <tr> <td> <p><a href="http://www.enrio.eu/wp-content/uploads/2019/03/INV-Handbook_ENRIO_web_final.pdf">Handbook on Research Integrity</a> </p> </td> <td> <p>European Network for Research Ethics and Integrity (ENERI) </p> </td> <td> <p>Researchers, Employers of researchers, Research funders </p> </td> </tr> <tr> <td> <p><a href="https://sops4ri.eu/wp-content/uploads/Guideline-for-Promoting-RI-in-RFOs_final.pdf">Guideline for Promoting Research Integrity in Research Funding Organisations</a> </p> </td> <td> <p>Standard Operating Procedures for Research Integrity (SOPs4RI) </p> </td> <td> <p>Research funders </p> </td> </tr> <tr> <td> <p><a href="https://ec.europa.eu/info/funding-tenders/opportunities/docs/2021-2027/horizon/guidance/guideline-for-promoting-research-integrity-in-research-performing-organisations_horizon_en.pdf">Guideline for Promoting Research Integrity in Research Performing Organisations</a> </p> </td> <td> <p>Standard Operating Procedures for Research Integrity (SOPs4RI) </p> </td> <td> <p>Employers of researchers </p> </td> </tr> <tr> <td> <p><a href="https://doi.org/10.24318/cope.2018.1.3">Cooperation between research institutions and journals on research integrity cases: guidance from the Committee on Publication Ethics</a> </p> </td> <td> <p>Committee on Publication Ethics (COPE) </p> </td> <td> <p>Publishers and Employers of researchers </p> </td> </tr> <tr> <td> <p><a href="https://doi.org/10.24318/cope.2019.1.4">COPE Retraction Guidelines</a> </p> </td> <td> <p>Committee on Publication Ethics (COPE) </p> </td> <td> <p>Publishers </p> </td> </tr> </tbody> </table> <p>Find more outputs of this project in the <a href="https://zenodo.org/communities/research-integrity-indicators/">dedicated Zenodo community</a>. </p>
Replication data [The who, what and how of the current research at the Brazilian Symposium on Software Engineering]
<p>Replication Data for the SBES paper <em>"The who, what and how of the current research at the Brazilian Symposium on Software Engineering"</em></p> <p>Dataset containing analysis (who, what and how) of 90 SBES papers: 27 from SBES’19, 43 from SBES’20, and 20 from SBES’21.</p>
Earthquake Catalogues for DWARFS (Dense Westland Arrays Researching Fault Segmentation)
<p>This dataset contains earthquake hypocentral information catalogued as part of the DWARFS (Dense Westland Arrays Researching Fault Segmentation) broadband seismometer networks along New Zealand's Alpine Fault, between April 2019-April 2020.</p> <p>'Preferred Lat/Lon/Depth' refers to origin determined by method under 'Method'. HypoDD is the preferred method, but some origins could not be relocated and so we present the NonLinLoc derived origin instead. All magnitudes are Local magnitudes calculated using displacements on the vertical channel (MLv). All times are in UTC time. </p> <p>This dataset accompanies a publication recently submitted (July 2022) to the AGU journal 'Journal of Geophysical Research: Solid Earth' entitled 'Heterogeneity in microseismicity and stress near rupture-limiting section boundaries along the late interseismic Alpine Fault'. </p>
References and Metadata for Electric vehicles' consumer behaviours: Mapping the field and providing a research agenda (https://doi.org/10.1016/j.jbusres.2022.06.011)
<p>The bibliography and metadata used for the analysis published in the Journal of Business Research - Electric vehicles' consumer behaviors: Mapping the field and providing a research agenda (https://doi.org/10.1016/j.jbusres.2022.06.011).</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.