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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
Reconstitution of human adrenocortical specification and steroidogenesis using induced pluripotent stem cells [scATAC-seq]
GEO Series GSE201793. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Designing a single cell ATAC-Seq (scATAC-Seq) dataset to benchmark scATAC-Seq analysis methods
GEO Series GSE223319. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
scATAC-seq and scRNA-seq over multiple time points of heart development in WT C57Bl6/J embryos and in Tbx1 mutant mice (Tbx1 KO)
GEO Series GSE198567. Mus musculus. 51 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA and ATAC sequencing revealed distinct molecular characteristics of B cells in systemic lupus erythematosus and primary Sjogren's syndrome (scATAC-Seq)
GEO Series GSE239458. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Benchmarking bulk and single-cell variant calling approaches on Chromium scRNA-seq and scATAC-seq libraries
GEO Series GSE213338. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Multi-modal skin atlas associates a multicellular immune-stromal community with altered cornification and T cell expansion in atopic dermatitis [scATAC-seq]
GEO Series GSE204764. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
GENERATION OF MOUSE NEOCORTICAL ORGANOIDS TO MODEL THE IMPACT OF CIS-REGULATORY VARIATION ON CORTICAL NEUROGENESIS ACROSS EVOLUTIONARY TIMESCALES (scATAC-Seq)
GEO Series GSE268331. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Epigenomes of Hemin exposed trained monocytes [scATAC-seq]
GEO Series GSE141968. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Unique sequence features define epigenetic longevity of inflammatory memory [scATAC-seq]
GEO Series GSE301537. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-tissue single cell profiling of genetically diverse mouse models reveals mechanisms of resilience to obesity and diabetes [scATAC-seq_islet]
GEO Series GSE272038. Mus musculus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin Remodeling Drives Immune-Fibroblast Cell Communication in Heart Failure (scATAC-Seq)
GEO Series GSE221696. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.