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2,848
datasets available to search
ShareScore release 0.9.0
Dataset results
2,848 results for “sequence data”
RNA-Seq data of ruminal epithelial tissue and 16S rRNA sequencing data of rumen digesta in goats infusion of three short-chain fatty acids
GEO Series GSE221509. Capra hircus. 36 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell sequencing data of brain tissue in septic mice
GEO Series GSE311977. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing data of NR-S1, mouse squamous cell carcinoma, and ME-180, human cervical carcinoma for controls and radioresistant cells
GEO Series GSE109663. Mus musculus; Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing data of femur bone marrow tissue derived from mice intramuscularly injected with a SARS-CoV2 mRNA vaccine
GEO Series GSE300880. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing data of stem cell-derived microfluidic human embryoids, NODAL-KO human embryoids and chimpanzee embryoids
GEO Series GSE185643. Homo sapiens; Pan troglodytes. 7 samples. Type: Expression profiling by high throughput sequencing.
Estimating DNA methylation heterogeneity in bisulfite sequencing data
GEO Series GSE103859. Homo sapiens. 2 samples. Type: Methylation profiling by high throughput sequencing.
RNA sequencing data of SK-BR-3 Parental vs lapatinib resistance (LR) cells
GEO Series GSE154470. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
small RNA and mRNA sequencing data of human granulosa cells from PCOS women with insulin resistance
GEO Series GSE124968. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Transgenerational whole genome bisulphite sequencing data from adult zebrafish exposed to low level TCDD
GEO Series GSE149919. Danio rerio. 19 samples. Type: Methylation profiling by high throughput sequencing.
Bulk RNA sequencing data of femur bone marrow tissue derived from mice intramuscularly injected with a SARS-CoV2 mRNA vaccine
GEO Series GSE292262. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Illumina sequencing of CRAC data obtained with Upf1 in yeast
GEO Series GSE299782. Saccharomyces cerevisiae. 6 samples. Type: Other.
RNA sequencing data of piglet intestinal tissue following different dietary treatments
GEO Series GSE281198. Sus scrofa. 32 samples. Type: Expression profiling by high throughput sequencing.
Bisulfite sequencing data of one human DNA sample
GEO Series GSE27239. Homo sapiens. 32 samples. Type: Methylation profiling by high throughput sequencing.
Novel biomarkers for contrast-induced acute kidney injury identified from RNA sequencing data
GEO Series GSE248078. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
External RNA Control Consortium (ERCC) spikes in RNA sequencing (RNA-Seq) data normalization: transcriptome analysis of yellow fever virus-infected cells
GEO Series GSE99081. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
RNA-sequencing data of liver tissue of pigs infected with parasites and adminstered proanthocyanidins (PAC)
GEO Series GSE206334. Sus scrofa. 23 samples. Type: Expression profiling by high throughput sequencing.
AARCHIVED - Data for Defining the function of disease variants with CRISPR editing and multimodal single cell sequencing: PTEN, FBXO11, HLA-DQB1
<p>Please refer to the more recent Zenodo record here: <a href="https://zenodo.org/records/15935857">https://zenodo.org/records/15935857</a>.</p>
R code and datasets for ITS2 DNA metabarcoding stigma sequence data
Open the record for dataset details and reuse information.
Data repository for 'Geometry of Sequence Working Memory in Macaque Prefrontal Cortex'
<p>Refer to Science article:</p> <p><strong>Xie, Hu et al. Geometry of Sequence Working Memory in Macaque Prefrontal Cortex. 2022</strong></p> <p>Accompanying code is available at <a href="https://github.com/yaopeihu/Sequence-working-memory/tree/v2">Github</a>. DOI: 10.5281/zenodo.5746184</p> <p><strong>decoding_data</strong>: data for decoding analysis</p> <p><strong>state_space_data</strong>: data for state space analysis</p> <p><strong>Image_001</strong> and <strong>trial_info</strong>: data for calcium image processing</p> <p><em>Please contact the corresponding author before submitting the access request here.</em></p>
Processed data supplementary to "Systematic benchmarking of single-cell ATAC sequencing protocols"
<p>Fragments.tsv.gz for all 15 samples + merged, each for the full sequencing data and library downsampled data (42k reads/cell for each sample). Also contains expression matrices for the multiome (full_10x_Multiome_?_RNA_gex.zip) and 10x scRNA-seq data (10x_scRNA_?_gex.zip).</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.