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3,292 results for “DNA Barcode”
Supplementary figure 2 from: Backeljau T, Breugelmans K, Jordaens K, Adriaens E, Remon J, Quintana Cardona J (2013) DNA barcodes and phylogenetic affinities of the terrestrial slugs Arion gilvus and A. ponsi (Gastropoda, Pulmonata, Arionidae). ZooKeys 365: 83-104. https://doi.org/10.3897/zookeys.365.6104
Supplementary figure 2 - Neighbour-Joining tree (Kimura 2-parameter model) of a 408 bp fragment of the mitochondrial 16S rDNA gene for the land slug subgenus Mesarion. Bootstrap values ≥ 70% are shown at the nodes. For sample codes see Table 1.
Supplementary figure 3 from: Backeljau T, Breugelmans K, Jordaens K, Adriaens E, Remon J, Quintana Cardona J (2013) DNA barcodes and phylogenetic affinities of the terrestrial slugs Arion gilvus and A. ponsi (Gastropoda, Pulmonata, Arionidae). ZooKeys 365: 83-104. https://doi.org/10.3897/zookeys.365.6104
Supplementary figure 3 - Neighbour-Joining tree (Kimura 2-parameter model) of a 587 bp fragment of the nuclear internal transcribed spacer 1 (ITS1) region for the land slug subgenus Mesarion. Bootstrap values ≥ 70% are shown at the nodes. For sample codes see Table 1.
Figure 2 from: Backeljau T, Breugelmans K, Jordaens K, Adriaens E, Remon J, Quintana Cardona J (2013) DNA barcodes and phylogenetic affinities of the terrestrial slugs Arion gilvus and A. ponsi (Gastropoda, Pulmonata, Arionidae). ZooKeys 365: 83-104. https://doi.org/10.3897/zookeys.365.6104
Figure 2 - Arion gilvus Torres Mínguez, 1925 from Serra de Pandóls (Valencia, Spain). A dorsal view B lateral view C ventral view.
Supplementary figure 1 from: Backeljau T, Breugelmans K, Jordaens K, Adriaens E, Remon J, Quintana Cardona J (2013) DNA barcodes and phylogenetic affinities of the terrestrial slugs Arion gilvus and A. ponsi (Gastropoda, Pulmonata, Arionidae). ZooKeys 365: 83-104. https://doi.org/10.3897/zookeys.365.6104
Supplementary figure 1 - Neighbour-Joining tree (Kimura 2-parameter model) of a 504 bp fragment of the mitochondrial cytochrome c oxidase subunit I (COI) gene for the land slug subgenus Mesarion. Bootstrap values ≥ 70% are shown at the nodes. For sample codes see Table 1.
Figure 1 from: Ballardini M, Mercuri A, Littardi C, Abbas S, Couderc M, Ludeña B, Pintaud J (2013) The chloroplast DNA locus psbZ-trnfM as a potential barcode marker in Phoenix L. (Arecaceae). ZooKeys 365: 71-82. https://doi.org/10.3897/zookeys.365.5725
Figure 1 - The sequenced cpDNA psbZ-trnfM region.The location of PCR primers used and polymorphisms found in this study are shown. DNA fragment length refers to the Phoenix dactylifera cv. Khalas cpDNA sequence (Yang et al. 2010), characterised by a 4-repetitions minisatellite haplotype (NCBI Reference Sequence: NC_013991.2).
Supplementary figure 4 from: Backeljau T, Breugelmans K, Jordaens K, Adriaens E, Remon J, Quintana Cardona J (2013) DNA barcodes and phylogenetic affinities of the terrestrial slugs Arion gilvus and A. ponsi (Gastropoda, Pulmonata, Arionidae). ZooKeys 365: 83-104. https://doi.org/10.3897/zookeys.365.6104
Supplementary figure 4 - Neighbour-Joining tree (Kimura 2-parameter model) of a 378 bp fragment of the nuclear internal transcribed spacer 1 (ITS1) region for the land slug subgenus Mesarion. This figure also includes the Iberian Mesarion ITS1 sequences of Quinteiro et al. (2005) Bootstrap values ≥ 70% are shown at the nodes. For sample codes see Table 1.
Figure 2 from: Nijman V, Vonk R, Roselaar K, van Brandwijk H, Beentjes K (2013) DNA barcoding of Dutch birds. ZooKeys 365: 25-48. https://doi.org/10.3897/zookeys.365.6287
Figure 2 - Phylogenetic relationships of two putative subspecies of Lesser Whitethroat, i.e. the Western Lesser Whitethroat Sylvia curruca curruca and the Northeastern Lesser Whitethroat Sylvia curruca blythi from the Netherlands, based on analysis of 694 bp of the mitochondrial cytochrome c oxidase subunit I gene (COI). Bootstrap values are given for the maximum likelihood (ML) analysis.
Figure 1 from: Nijman V, Vonk R, Roselaar K, van Brandwijk H, Beentjes K (2013) DNA barcoding of Dutch birds. ZooKeys 365: 25-48. https://doi.org/10.3897/zookeys.365.6287
Figure 1 - Comparisons of K2P-pairwise distances based on the COI gene of 141 species of birds from the Netherlands, showing a clear barcoding gap. Interspecific distances are indicated with light grey bars and intraspecific distances with dark grey bars. Left Y-axis: numbers of intraspecific comparisons; Right Y-axis: numbers of interspecific comparisons.
Figure 3 from: Backeljau T, Breugelmans K, Jordaens K, Adriaens E, Remon J, Quintana Cardona J (2013) DNA barcodes and phylogenetic affinities of the terrestrial slugs Arion gilvus and A. ponsi (Gastropoda, Pulmonata, Arionidae). ZooKeys 365: 83-104. https://doi.org/10.3897/zookeys.365.6104
Figure 3 - Neighbour-Joining tree (Kimura 2-parameter model) of a 1499 bp concatenated fragment (504 bp of the mitochondrial cytochrome c oxidase subunit I (COI) gene, 408 bp of the mitochondrial 16S rDNA gene, 587 bp fragment of the nuclear internal transcribed spacer 1 (ITS1) region) for the land slug subgenus Mesarion. Bootstrap values ≥ 70% are shown at the nodes. For sample codes see Table 1.
Figure 1 from: Ardura A, Planes S, Garcia-Vazquez E (2013) Applications of DNA barcoding to fish landings: authentication and diversity assessmente. ZooKeys 365: 49-65. https://doi.org/10.3897/zookeys.365.6409
Figure 1 - Summary of population genetic diversity retrieved fromeach mitochondrial region separately (12S rDNA, COI, cyt b, D-Loop), from the coding and from all regions concatenated (All), in the four case studies. Mean (standard deviation as vertical bars) is provided for Nh/n, Hd and π (mean number of different haplotypes per species, haplotype diversity and nucleotide diversity respectively).
Figure 6 from: Gere J, Kowiyou Y, Daru B, Mankga L, Maurin O, van der Bank M (2013) Incorporating trnH-psbA to the core DNA barcodes improves significantly species discrimination within southern African Combretaceae. ZooKeys 365: 129-147. https://doi.org/10.3897/zookeys.365.5728
Figure 6 - Gene performance based on monophyly criteria. False = proportion of non-monophyletic species; True = proportion of monophyletic species.
Figure 3 from: Gere J, Kowiyou Y, Daru B, Mankga L, Maurin O, van der Bank M (2013) Incorporating trnH-psbA to the core DNA barcodes improves significantly species discrimination within southern African Combretaceae. ZooKeys 365: 129-147. https://doi.org/10.3897/zookeys.365.5728
Figure 3 - Comparisons of the distribution range of inter- versus intraspecific distances using boxplot a indicates comparison of single barcode gene regions b indicates the results of gene combinations.
Figure 1 from: Gere J, Kowiyou Y, Daru B, Mankga L, Maurin O, van der Bank M (2013) Incorporating trnH-psbA to the core DNA barcodes improves significantly species discrimination within southern African Combretaceae. ZooKeys 365: 129-147. https://doi.org/10.3897/zookeys.365.5728
Figure 1 - Selected inflorescences of seven Combretum species indicating closely related species evaluated based upon floral characters. A Combretum paniculatum B Combretum microphyllum C Combretum platypetalum D Combretum hereroense E Combretum apiculatum F Combretum molle G Combretum kraussii. All photographs by O. Maurin.
Figure 4 from: Gere J, Kowiyou Y, Daru B, Mankga L, Maurin O, van der Bank M (2013) Incorporating trnH-psbA to the core DNA barcodes improves significantly species discrimination within southern African Combretaceae. ZooKeys 365: 129-147. https://doi.org/10.3897/zookeys.365.5728
Figure 4 - Relationships between inter- and intraspecific distances indicating barcoding gap for all regions tested.
Figure 2 from: Gere J, Kowiyou Y, Daru B, Mankga L, Maurin O, van der Bank M (2013) Incorporating trnH-psbA to the core DNA barcodes improves significantly species discrimination within southern African Combretaceae. ZooKeys 365: 129-147. https://doi.org/10.3897/zookeys.365.5728
Figure 2 - Selectedmature dry four-winged fruits of closely related species of genus Combretum. A Combretum mkuzense B Combretum microphyllum C Combretum englerii D Combretum apiculatum E Combretum moggii F Combretum albopunctatum G Combretum collinum. All photographs by O. Maurin.
Supplementary figure 2 from: Jordaens K, Sonet G, Braet Y, de Meyer M, Backeljau T, Goovaerts F, Bourguignon L, Desmyter S (2013) DNA barcoding and the differentiation between North American and West European Phormia regina (Diptera, Calliphoridae, Chrysomyinae). ZooKeys 365: 149-174. https://doi.org/10.3897/zookeys.365.6202
Supplementary figure 2 - Neighbour-Joining tree (p-distances) of a 404 bp (229 bp without indels) fragment of the nuclear internal transcribed spacer 2 (ITS2). Bootstrap values ≥ 70% are shown at the nodes. N gives the number of specimens of that haplotype. EU = Phormia regina haplotypes from W Europe; NA = Phormia regina haplotypes from N America.
Supplementary figure 1 from: Jordaens K, Sonet G, Braet Y, de Meyer M, Backeljau T, Goovaerts F, Bourguignon L, Desmyter S (2013) DNA barcoding and the differentiation between North American and West European Phormia regina (Diptera, Calliphoridae, Chrysomyinae). ZooKeys 365: 149-174. https://doi.org/10.3897/zookeys.365.6202
Supplementary figure 1 - Neighbour-Joining tree (p-distances) of a 350 bp (A) and of a 251 bp (B) fragment of the mitochondrial 16S gene. Bootstrap values ≥ 70% are shown at the nodes. N gives the number of specimens of that haplotype. EU = Phormia regina haplotypes from W Europe; NA = Phormia regina haplotypes from N America.
Figure 4 from: Jordaens K, Sonet G, Braet Y, de Meyer M, Backeljau T, Goovaerts F, Bourguignon L, Desmyter S (2013) DNA barcoding and the differentiation between North American and West European Phormia regina (Diptera, Calliphoridae, Chrysomyinae). ZooKeys 365: 149-174. https://doi.org/10.3897/zookeys.365.6202
Figure 4 - Neighbour-Joining tree (p-distances) of a 512 bp fragment of the mitochondrial cytochrome b (cyt b) gene. Bootstrap values ≥ 70% are shown at the nodes. N gives the number of specimens of that haplotype. EU = Phormia regina haplotypes from W Europe; NA = Phormia regina haplotypes from N America.
Figure 3 from: Jordaens K, Sonet G, Braet Y, de Meyer M, Backeljau T, Goovaerts F, Bourguignon L, Desmyter S (2013) DNA barcoding and the differentiation between North American and West European Phormia regina (Diptera, Calliphoridae, Chrysomyinae). ZooKeys 365: 149-174. https://doi.org/10.3897/zookeys.365.6202
Figure 3 - Neighbour-Joining tree (p-distances) of a 472 bp fragment of the mitochondrial cytochrome c oxidase subunit II (COII) gene. Bootstrap values ≥ 70% are shown at the nodes. N gives the number of specimens of that haplotype. EU = Phormia regina haplotypes from W Europe; NA = Phormia regina haplotypes from N America.
Figure 2 from: Jordaens K, Sonet G, Braet Y, de Meyer M, Backeljau T, Goovaerts F, Bourguignon L, Desmyter S (2013) DNA barcoding and the differentiation between North American and West European Phormia regina (Diptera, Calliphoridae, Chrysomyinae). ZooKeys 365: 149-174. https://doi.org/10.3897/zookeys.365.6202
Figure 2 - Neighbour-Joining tree (p-distances) of a 655 bp fragment of the mitochondrial cytochrome c oxidase subunit I (COI) gene. Bootstrap values ≥ 70% are shown at the nodes. N gives the number of specimens of that haplotype. EU = Phormia regina haplotypes from W Europe; NA = Phormia regina haplotypes from N America.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.