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3,292 results for “DNA Barcode”
Figure 6 from: Hogendoorn K, Stevens M, Leijs R (2015) DNA barcoding of euryglossine bees and the description of new species of Euhesma Michener (Hymenoptera, Colletidae, Euryglossinae). ZooKeys 520: 41-59. https://doi.org/10.3897/zookeys.520.6185
Figure 6 - Euhesma lyngouriae sp. n.: A–D Holotype female: A dorsal B lateral C head lateral D head frontal.
Figure 5 from: Hogendoorn K, Stevens M, Leijs R (2015) DNA barcoding of euryglossine bees and the description of new species of Euhesma Michener (Hymenoptera, Colletidae, Euryglossinae). ZooKeys 520: 41-59. https://doi.org/10.3897/zookeys.520.6185
Figure 5 - Euhesma micans sp. n.: A–E Allotype male genital structures: A genital dorsal B genital ventral C S7 dorsal D S7 ventral E S8 dorsal. Scale bars: 200 μm.
Figure 1 from: Guo H-F, Guan B, Shi F-M, Zhou Z-J (2016) DNA Barcoding of genus Hexacentrus in China reveals cryptic diversity within Hexacentrus japonicus (Orthoptera, Tettigoniidae). ZooKeys 596: 53-63. https://doi.org/10.3897/zookeys.596.8669
Figure 1 - Barcode gap plot showed the distance to the nearest neighbor (NN) vs. the maximum intraspecific distance Kimura-2-parameter (K2P) for 83 specimens. Dots above the 1:1 line indicated the presence of a barcode gap.
Figure 2 from: Guo H-F, Guan B, Shi F-M, Zhou Z-J (2016) DNA Barcoding of genus Hexacentrus in China reveals cryptic diversity within Hexacentrus japonicus (Orthoptera, Tettigoniidae). ZooKeys 596: 53-63. https://doi.org/10.3897/zookeys.596.8669
Figure 2 - Taxon ID tree revealed seven well-differentiated haplogroups. Process ID, location, and BINs were shown in the tree. The clusters with a blue box indicated there may be two new putative 'cryptic species' within Hexacentrus japonicus. The clade with a black box indicated the specimen had more mutation within Hexacentrus unicolor.
Figure 1 from: Estupiñán RA, Ferrari SF, Gonçalves EC, Barbosa MSR, Vallinoto M, Schneider MPC (2016) Evaluating the diversity of Neotropical anurans using DNA barcodes. ZooKeys 637: 89-106. https://doi.org/10.3897/zookeys.637.8637
Figure 1 - The BX044 priority area for conservation showing the sites at which anuran specimens were collected.
Figure 2 from: Estupiñán RA, Ferrari SF, Gonçalves EC, Barbosa MSR, Vallinoto M, Schneider MPC (2016) Evaluating the diversity of Neotropical anurans using DNA barcodes. ZooKeys 637: 89-106. https://doi.org/10.3897/zookeys.637.8637
Figure 2 - Transition (s) and transversions (v) plotted against the sequence divergence (Kimura 2-parameter distances) for the analyzed anurans.
Figure 4 from: Estupiñán RA, Ferrari SF, Gonçalves EC, Barbosa MSR, Vallinoto M, Schneider MPC (2016) Evaluating the diversity of Neotropical anurans using DNA barcodes. ZooKeys 637: 89-106. https://doi.org/10.3897/zookeys.637.8637
Figure 4 - Neighbor-joining (NJ) tree derived from the analysis of COI sequences. The numbers at the nodes represent the percentage bootstrap values.
Figure 1 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2016) A DNA barcode library for ground beetles (Insecta, Coleoptera, Carabidae) of Germany: The genus Bembidion Latreille, 1802 and allied taxa. ZooKeys 592: 121-141. https://doi.org/10.3897/zookeys.592.8316
Figure 1 - Representative images of analyzed beetle species. A Asaphidion caraboides (Schrank, 1781) B Asaphidion flavipes (Linnaeus, 1761) C Ocys harpaloides (Audinet-Serville, 1821) D Ocys quinquestriatus (Gyllenhal, 1810) E Sinechostictus elongatus (Dejean, 1831) F Sinechostictus ruficornis (Sturm, 1825) G Bembidion (Bembidion) quadrimaculatum (Linnaeus, 1761) H Bembidion (Bembidionetolitzkya) fasciolatum (Duftschmid, 1812) I Bembidion (Emphanes) azurescens Dalla Torre, 1877 J Bembidion (Notaphus) semipunctatum (Donovan, 1806) K Bembidion (Ocydromus) testaceum (Duftschmid, 1812) L Bembidion (Bracteon) litorale (Olivier, 1790) M Bembidion (Philochthus) biguttatum (Fabricius, 1779) N Bembidion (Talanes) aspericolle (Germar, 1829) O Bembidion (Trepanedoris) doris (Panzer, 1796), and P Bembidion (Trepanes) octomaculatum (Goeze, 1777). Scale bars = 1 mm. All images were obtained from www.eurocarabidae.de.
Figure 6 from: Chow S, Konishi K, Mekuchi M, Tamaki Y, Nohara K, Takagi M, Niwa K, Teramoto W, Manabe H, Kurogi H, Suzuki S, Ando D, Jinbo T, Kiyomoto M, Hirose M, Shimomura M, Kurashima A, Ishikawa T, Kiyomoto S (2016) DNA barcoding and morphological analyses revealed validity of Diadema clarki Ikeda, 1939 (Echinodermata, Echinoidea, Diadematidae). ZooKeys 585: 1-16. https://doi.org/10.3897/zookeys.585.8161
Figure 6 - Neighbor-joining phylogenetic tree drawn using from COI sequence data. Bootstrap support (>50%) after 1,000 replications is shown at each node. Italic accession numbers with dagger (AY012732, AY012733, AY012742–AY012747) are from Lessios et al. (2001) and red accession numbers with asterisk (AB900024, AB909927, AB909929–AB909931, AB909933–AB909935, AB909942, AB909945, AB909947, AB909949, AB909953, AB909955, AB909957) are from Chow et al. (2014).
Figure 2 from: Chow S, Konishi K, Mekuchi M, Tamaki Y, Nohara K, Takagi M, Niwa K, Teramoto W, Manabe H, Kurogi H, Suzuki S, Ando D, Jinbo T, Kiyomoto M, Hirose M, Shimomura M, Kurashima A, Ishikawa T, Kiyomoto S (2016) DNA barcoding and morphological analyses revealed validity of Diadema clarki Ikeda, 1939 (Echinodermata, Echinoidea, Diadematidae). ZooKeys 585: 1-16. https://doi.org/10.3897/zookeys.585.8161
Figure 2 - Underwater aboral view of phenotype I of Diadema-sp, KPM-NJL000035, original specimen number is AT1.
Figure 5 from: Chow S, Konishi K, Mekuchi M, Tamaki Y, Nohara K, Takagi M, Niwa K, Teramoto W, Manabe H, Kurogi H, Suzuki S, Ando D, Jinbo T, Kiyomoto M, Hirose M, Shimomura M, Kurashima A, Ishikawa T, Kiyomoto S (2016) DNA barcoding and morphological analyses revealed validity of Diadema clarki Ikeda, 1939 (Echinodermata, Echinoidea, Diadematidae). ZooKeys 585: 1-16. https://doi.org/10.3897/zookeys.585.8161
Figure 5 - Aboral view (A) and enlarged view of a naked space of the interambulacral area (B) in a reference dried specimen of Diadema found in Ikeda's collection. KMNH IvR 500788, original specimen No. is IK3. White streak-like remnant can be seen (A, B), and the outer and inner series of primary tubercles initiated on the 3rd and 5th coronal plates, respectively (B). Scales bars = 20 mm (A) and 10 mm (B).
Figure 3 from: Chow S, Konishi K, Mekuchi M, Tamaki Y, Nohara K, Takagi M, Niwa K, Teramoto W, Manabe H, Kurogi H, Suzuki S, Ando D, Jinbo T, Kiyomoto M, Hirose M, Shimomura M, Kurashima A, Ishikawa T, Kiyomoto S (2016) DNA barcoding and morphological analyses revealed validity of Diadema clarki Ikeda, 1939 (Echinodermata, Echinoidea, Diadematidae). ZooKeys 585: 1-16. https://doi.org/10.3897/zookeys.585.8161
Figure 3 - Underwater aboral views of four phenotypes (A–E) and color variants of phenotype I (F) of Diadema-sp, Diadema setosum (G), and Diadema savignyi (H). A KPM-NJL000036, original specimen number is AT2 designated as phenotype II B KPM-NJL000037, original specimen number is AT3 designated as phenotype III C KPM-NJL000039, original specimen number is AR59 designated as phenotype IV D KPM-NJL000038, original specimen No. is AR54 designated as phenotype V E KPM-NJL000040, original specimen No. is AR70 designated as phenotype V F color variant of phenotype I observed at Haida-ura in Mie Prefecture (Figure 1E) photographed by T. Ishikawa G Diadema setosum (DST2 in Chow et al. (2014)) H Diadema savignyi (DSV23 in Chow et al. (2014)).
Figure 1 from: Chow S, Konishi K, Mekuchi M, Tamaki Y, Nohara K, Takagi M, Niwa K, Teramoto W, Manabe H, Kurogi H, Suzuki S, Ando D, Jinbo T, Kiyomoto M, Hirose M, Shimomura M, Kurashima A, Ishikawa T, Kiyomoto S (2016) DNA barcoding and morphological analyses revealed validity of Diadema clarki Ikeda, 1939 (Echinodermata, Echinoidea, Diadematidae). ZooKeys 585: 1-16. https://doi.org/10.3897/zookeys.585.8161
Figure 1 - Localities where field observation and sampling of Diadema were performed. See Table 1 for detailed information. A Arasaki (Kanagawa Prefecture) B Tateyama (Chiba) C Mera (Shizuoka) D Shikine-jima (Tokyo) E Haida-ura (Mie) F Kushimoto (Wakayama) G Hachijo-jima (Tokyo) H Uchidomari (Ehime) I Iki-no-shima (Nagasaki) J Ojika (Nagasaki) K Mie (Nagasaki) L Shibushi (Kagoshima) M Kaimon (Kagoshima) N Tanega-shima (Kagoshima) O Yaku-shima (Kagoshima) P Amami Ohshima (Kagoshima) Q Ogasawara (Tokyo) R Motobu (Okinawa) S Sesoko (Okinawa) T Ishigaki-jima (Okinawa). Diadema setosum was observed in all areas surveyed. No Diadema savignyi but Diadema-sp were observed at localities with yellow circle, Both Diadema savignyi and Diadema-sp were observed at localities with white circle, No Diadema-sp but Diadema savignyi were observed at localities with red circle.
Figure 4 from: Chow S, Konishi K, Mekuchi M, Tamaki Y, Nohara K, Takagi M, Niwa K, Teramoto W, Manabe H, Kurogi H, Suzuki S, Ando D, Jinbo T, Kiyomoto M, Hirose M, Shimomura M, Kurashima A, Ishikawa T, Kiyomoto S (2016) DNA barcoding and morphological analyses revealed validity of Diadema clarki Ikeda, 1939 (Echinodermata, Echinoidea, Diadematidae). ZooKeys 585: 1-16. https://doi.org/10.3897/zookeys.585.8161
Figure 4 - Preserved specimen of phenotypes I (A), II (B), III (C) and V (D) of Diadema-sp, corresponding to AT1 (KPM-NJL000035) in Figure 2, and AT2, AT3 and AR54 (KPM-NJL000036‒KPM-NJL000038) in Figures 3A, B and D, respectively. All scale bars = 10 mm.
Supplementary material 1 from: Singh G, Aptroot A, Rico VJ, Otte J, Divakar PK, Crespo A, Cáceres ME da S, Lumbsch HT, Schmitt I (2018) Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters. MycoKeys 44: 19-50. https://doi.org/10.3897/mycokeys.44.29904
Table S1: List of primers used in this study :
Figure 7 from: Singh G, Aptroot A, Rico VJ, Otte J, Divakar PK, Crespo A, Cáceres ME da S, Lumbsch HT, Schmitt I (2018) Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters. MycoKeys 44: 19-50. https://doi.org/10.3897/mycokeys.44.29904
Figure 7 Neoprotoparmeliacapensis, holotype Crespo, Divakar, Hawksworth, Amo & Lumbsch 63f (MAF-Lich. 19584). a Habit b Section through centre of apothecium, showing cupular proper exciple (arrow) c Ascus d Spores, showing setae (arrow). Scale bars: 2 mm (a), 100 µm (b), 10 µm (c), 5 µm (d).
Figure 8 from: Singh G, Aptroot A, Rico VJ, Otte J, Divakar PK, Crespo A, Cáceres ME da S, Lumbsch HT, Schmitt I (2018) Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters. MycoKeys 44: 19-50. https://doi.org/10.3897/mycokeys.44.29904
Figure 8 Neoprotoparmeliacorallifera (type species Neoprotoparmelia), sample Papong 7100. Scale bar: 1 mm.
Figure 12 from: Singh G, Aptroot A, Rico VJ, Otte J, Divakar PK, Crespo A, Cáceres ME da S, Lumbsch HT, Schmitt I (2018) Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters. MycoKeys 44: 19-50. https://doi.org/10.3897/mycokeys.44.29904
Figure 12 Neoprotoparmeliaplurisporibadia, holotype Cáceres & Aproot 22130 (ABL). a Habitus b ascus with ascospores. Scale bars: 1 mm (a), 10 micron (b).
Figure 6 from: Singh G, Aptroot A, Rico VJ, Otte J, Divakar PK, Crespo A, Cáceres ME da S, Lumbsch HT, Schmitt I (2018) Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters. MycoKeys 44: 19-50. https://doi.org/10.3897/mycokeys.44.29904
Figure 6 Neoprotoparmeliabrasilisidiata, holotype Cáceres & Aproot 21684 (ISE). Scale bar: 1 mm.
Figure 3 from: Singh G, Aptroot A, Rico VJ, Otte J, Divakar PK, Crespo A, Cáceres ME da S, Lumbsch HT, Schmitt I (2018) Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters. MycoKeys 44: 19-50. https://doi.org/10.3897/mycokeys.44.29904
Figure 3 Maroninaaustraliensis (type species of Maronina), holotype Hafellner 17823 & Rogers (GZU). Scale bar: 1 mm.
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Allen Brain Atlas
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.