Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
289
datasets available to search
ShareScore release 0.9.0
Dataset results
289 results for “Genomic prediction”
Predicting Relapse in Patients With Medulloblastoma by Integrating Evidence From Clinical and Genomic Feature
GEO Series GSE201583. Homo sapiens. 111 samples. Type: Expression profiling by array; Third-party reanalysis.
Integrating a genome-wide association study with a large-scale transcriptome analysis to predict genetic regions influencing the glycemic index and texture in rice
GEO Series GSE123616. Oryza sativa Indica Group. 21 samples. Type: Expression profiling by array.
Integration of genomic and clinical data to predict endometrioid endometrial cancer recurrence
GEO Series GSE216872. Homo sapiens. 61 samples. Type: Expression profiling by high throughput sequencing.
Genomic Study for the Prediction of Efficacy and Adverse Effects of CD11a Monoclonal Antibodies(Raptiva)
ClinicalTrials.gov study NCT00602823. IPD Sharing: Not stated. Countries: 0. Publications: 0.
maxATAC: genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks
GEO Series GSE197009. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Comprehensive Genomic Profiling to Improve Prediction of Clinical Outcome for Children with T-cell Acute Lymphoblastic Leukemia
Namespace hosted on the Kids First DRC FHIR services at fhir.kidsfirstdrc.org
Nuclear genome annotations, mRNA predictions, and protein predictions
<p>Nuclear genome annotations, mRNA predictions, and protein predictions</p>
Augustus training parameters for CP genome predictions
<p>Augustus training parameters for CP genome predictions</p>
Data from: Environmental variation predicts patterns of phenotypic and genomic variation in an African tropical forest frog
<p>Central African rainforests are predicted to be disproportionately affected by future climate change. How species will cope with these changes is unclear, but rapid environmental changes will likely impose strong selection pressures. Here we examined environmental drivers of phenotypic and genomic variation in the central African puddle frog (<i>Phrynobatrachus auritus</i>) to identify areas of elevated environmentally-associated turnover where populations may have the greatest capacity to adapt. We also compared current and future climate models to pinpoint areas of high genomic vulnerability where allele frequencies will have to shift the most in order to keep pace with future climate change. Analyses of body size, relative leg length, and head shape suggest that seasonal aspects of temperature and precipitation significantly influence phenotypic variation, whereas geographic distance and precipitation seasonality are the most important drivers of SNP allele frequency variation. However, neither landscape barriers nor the effects of past Pleistocene refugia had any influence on genomic differentiation. Most phenotypic and genomic differentiation coincided with key ecological gradients across the forest-savanna ecotone, montane areas and a coastal to interior rainfall gradient. Areas of greatest vulnerability were found in the lower Sanaga basin and southeastern region of Cameroon. In contrast with past conservation efforts that have focused on hotspots of species richness or endemism, our findings highlight the importance of preserving environmentally heterogeneous landscapes to preserve putatively adaptive variation and ongoing evolutionary processes in the face of climate change.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.