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opencc-by-4.0Jun 2022View details →

Crustal anatomy and evolution of a subduction-related orogenic system: Insights from the Southern Central Andes (22-35°S)

Kinematic models made with software MOVE, presented in the article "Crustal anatomy and evolution of a subduction-related orogenic system: Insights from the Southern Central Andes (22-35°S)". SPANISH: Modelos cinemáticos realizados en el software MOVE correspondientes al articulo: "Crustal anatomy and evolution of a subduction-related orogenic system: Insights from the Southern Central Andes (22-35°S)". (Anatomía cortical y evolución de un sistema orogénico relacionado a subducción)

opencc-zeroJul 2022View details →

Data from: Widespread bird species show idiosyncratic responses in residual body mass to selective logging and edge effects in the Colombian Western Andes

This dataset consists of banding data (N = 1589 captures, 129 bird species), including morphological and breeding biology measures, collected from understory birds in subtropical cloudforest at roughly 2000 m.a.s.l. in the municipality of El Cairo in Colombia's Western Andes (Serrania de los Paraguas range). Roughly 8,350 net hours were divided into two three-month field seasons (June-August 2017 and January-March 2018), both corresponding to local dry seasons. Birds were banded along 500-meter transects in forest interior across a gradient of forest fragment patch sizes (N = 8 fragments, area range = 10-173 ha) and a private ~750 ha reserve (Reserva Natural Cerro El Ingles) in the same landscape. Each non-hummingbird capture was fitted with an aluminum leg band with a unique combination, and we collected data on mass, tarsus length, wing chord, pectoral muscle score, cloacal protuberance and brood patch score, and age and sex (where possible due to plumage differences). We captured 101 species (including 6 boreal migrants) in 844 captures (53%) during the January-March sampling period and 102 species in 745 captures during the June-August sampling period; each site was sampled during both sampling periods. The most captured bird families were Trochilidae (24 spp., 36% of total captures), Thraupidae (17 spp.), Tyrannidae (16 spp.), Furnariidae (14 spp.), and Turdidae (6 spp.). A subset of these data (uploaded as a separate file) were used to calculate body condition indices for 20 species of commonly captured birds (N = 984 captures) that occured across much of the patch size gradient (at least 8 out of 14 transects), and were related to fragment area and measures of edge and selective logging effects (see Jones et al. 2022). In this file, we include all predictor variables necessary to run the generalized linear mixed models in Jones et al. (2022), including proportion forest cover within 1 km (a proxy for patch size), edge density, average distance to forest edge from the netting transect, average canopy cover and height along the transect, multivariate measures of understory plant density, large-diameter tree density, and vertical vegetation structure, elevation of each transect, and average yearly rainfall for each transect.

opencc-zeroAug 2022View details →

Ecuadorian Plant-Hummingbird interactions over an elevation gradient in the Andes, sampled with camera traps in 11 localities

Community ecologists have made great advances in understanding how natural communities can be both diverse and stable by studying communities as interaction networks. However, focus has been on interaction networks aggregated over time, neglecting the consequences of the seasonal organization of interactions, henceforth seasonal structure, for community stability. Here, we extended previous theoretical findings on the topic in two ways: (i) by integrating empirical seasonal structure of 11 plant-hummingbird communities into dynamic models, and (ii) by tackling multiple facets of network stability together. We show that, in a competition context, seasonal structure enhances community stability by allowing diverse and resilient communities while preserving their robustness to species extinctions. The positive effects of empirical seasonal structure on network stability vanished when using randomized seasonal structures, suggesting that eco-evolutionary dynamics produce stabilizing seasonal structures. We also show that the effects of seasonal structure on community stability are mainly mediated by changes in network structure and productivity, suggesting that the seasonal structure of a community is an important and yet neglected aspect in the diversity-stability and diversity-productivity debates.

opencc-zeroMay 2024View details →

Data from: High foraging fidelity and plant-pollinator network dominance of non-native honeybees (Apis mellifera) in the Ecuadorian Andes

These data reflect the floral visitor survey and mark-recapture efforts used in the 2022 study, "High Foraging Fidelity and Plant‑Pollinator Network Dominance of Non‑native Honeybees (Apis mellifera) in the Ecuadorian Andes"

Fig. 2 in Two new species of gymnophthalmid lizards of the genus Petracola (Squamata: Cercosaurinae) from the Andes of northeastern Peru, and their phylogenetic relationships

Fig. 2. Holotype of Petracola amazonensis, female MUBI 11485 (SVL = 43.0 mm, TL = 42.3 mm).

opencc-by-4.0Nov 2019View details →

Fig. 5 in A new glassfrog (Centrolenidae: Hyalinobatrachium) from the Topo River Basin, Amazonian slopes of the Andes of Ecuador

Fig. 5. Distribution of Hyalinobatrachium adespinosai sp. nov. in Ecuador.

opencc-by-4.0Nov 2019View details →

Fig. 2 in A new glassfrog (Centrolenidae: Hyalinobatrachium) from the Topo River Basin, Amazonian slopes of the Andes of Ecuador

Fig. 2. Hyalinobatrachium adespinosai sp. nov. in life, holotype.

opencc-zeroJun 2024View details →

Occupancy of two Colombian endemic birds (Habia gutturalis) and White-Mantled Barbet (Capito hypoleucus) in fragmented forests of the Central Andes in Colombia

The Sooty Ant-Tanager (Habia gutturalis) and White-mantled Barbet (Capito hypoleucus) are endangered and endemic birds of Colombia. Both species have small geographic ranges and presumably low population sizes possibly due to habitat destruction and fragmentation. In order to estimate the effects of landscape features on the occupancy of both species, we sampled a variety of landscape configurations within the buffer zones of two hydroelectric impoundments in the Central Andes of Colombia and applied occupancy models to estimate the proportion of area occupied as a function of these covariates. We surveyed 35 point-counts in each hydroelectric impoundment, between June and July of 2014 and 2015. We used single-season models to estimate occupancy while recognizing imperfect detection. Mean occupancy estimates in the study area were similar for both species (0.61 SD=0.33 for the Sooty Ant-Tanager and 0.63 SD=0.25 for the White-mantled). Nonetheless, occupancy probability within the study area was very different between them. The best model for the Sooty Ant-Tanager indicated a decrease in occupancy with elevation, whereas the top model for the White-mantled Barbet indicated an increase in occupancy with distance from streams. Detection probabilities were similar for both species (>0.4) and declined significantly during the second year. Our results provide quantitative guidelines that can be used to evaluate and monitor the state of these populations on the short and long term.

opencc-by-4.0Jan 2019View details →

Fig 2 in Four new species of Capsicum (Solanaceae) from the tropical Andes and an update on the phylogeny of the genus

Fig 2. Distribution of Capsicum species. https://doi.org/10.1371/journal.pone.0209792.g002

opencc-by-4.0Feb 2019View details →

Aligned DNA sequence matrix for phylogenetic analyses of the article "A bizarre new species of Lynchius (Amphibia, Anura, Strabomantidae) from the Andes of Ecuador and first report of Lynchius parkeri in Ecuador"

Aligned DNA sequence matrix for phylogenetic analyses of the article "A bizarre new species of Lynchius (Amphibia, Anura, Strabomantidae) from the Andes of Ecuador and first report of Lynchius parkeri in Ecuador" The matrix is in NEXUS format. Genes are arranged as follows: RAG1: 1-652 Tyrosinase: 653-1195 12S RNA: 1196-2242 tRNA Val: 2243-2313 16S RNA: 2314-3994 tRNA Leu = 3995-4065 ND1: 4066-5026 tRNA Ile: 5027-5144;

opencc-by-4.0Oct 2019View details →

Raindrop size distribution and precipitation over Peruvian central Andes (12.0°S)

The raindrop size distribution and precipitation over Peruvian central Andes (12.0°S) database consist of raindrop size distribution, raindrop fall velocity and precipitation data measured in the Huancayo Observatory of Peru. Two Parsivel 2 and two tipping bucket rain gauge are used in this database which are operating together since 2018. The repository ULR: https://scah.igp.gob.pe/sites/datos/PP_prods/ There are two types of files, one NetCDF for the precipitation totals and another NetCDF which contains each Parsivel2 raw data. The precipitation totals files are located in the subfolder: https://scah.igp.gob.pe/sites/datos/PP_prods/PP_dia/ And the Parsivel2 raw data are located in the sub folder: https://scah.igp.gob.pe/sites/datos/PP_prods/PSV_nc/ This repository is part of the Atmospheric Microphysics And Radiation Laboratory (LAMAR), Huancayo Observatory (12.0S, 75.3W, 3113 m ASL) (https://scah.igp.gob.pe/laboratorios/lamar)

opencc-by-4.0Sep 2020View details →

Figure 3 in Butterflies of the family Pieridae (Lepidoptera: Papilionoidea) of the Frio river basin, northeastern Andes of Santander, Colombia

Figure 3. Altitudinal distribution of the genera of family Pieridae in the Frio river basin.

opencc-by-4.0Sep 2020View details →

Figure 2 in Butterflies of the family Pieridae (Lepidoptera: Papilionoidea) of the Frio river basin, northeastern Andes of Santander, Colombia

Figure 2. Abundance and richness of species by sampling sites.

opencc-by-4.0Sep 2020View details →

Figure 1 in Butterflies of the family Pieridae (Lepidoptera: Papilionoidea) of the Frio river basin, northeastern Andes of Santander, Colombia

Figure 1. Location of study zone and sampling places (modified from Google Earth Pro 2020).

opencc-by-4.0Aug 2020View details →

Figura 25 in El género Metacrisia Hampson (Lepidoptera: Erebidae: Arctiinae: Phaegopterina) en los Andes peruanos, con la descripción de una nueva subespecie y especie

Figura 25. Distribución geográfica del género Metacrisia en Perú.

opencc-by-4.0Aug 2022View details →

Fig. 3 in Infestation, histology, and molecular confirmation of Sarcoptes scabiei in an Andean porcupine (Coendou quichua) from the Central Andes of Colombia

Fig. 3. Wild mammals with sarcoptic mange (S. scabiei) in South America.

Table 2. Pairwise uncorrected p - distances for 16 S in Two new species of gymnophthalmid lizards of the genus Petracola (Squamata: Cercosaurinae) from the Andes of northeastern Peru, and their phylogenetic relationships

Table 2. Pairwise uncorrected p -distances for 16S rRNA between Petracola species. The asterisk (*) indicates type locality.<table><tbody><tr><th></th><th>1</th><th>2</th><th>3</th><th>4</th><th>5</th><th>6</th><th>7</th><th>8</th><th>9</th><th>10</th></tr></tbody><tbody><tr><th>(1) P. ventrimaculatus CORBIDI 9235</th><td>-</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>(2) P. ventrimaculatus KU 219838</th><td>0.024</td><td>-</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>(3) P. waka KU 212687</th><td>0.063</td><td>0.071</td><td>-</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>(4) P. waka MUBI 2603</th><td>0.073</td><td>0.091</td><td>0.063</td><td>-</td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>(5) P. waka MUBI 2605</th><td>0.073</td><td>0.091</td><td>0.063</td><td>0.000</td><td>-</td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>(6) P. waka MUBI 2609*</th><td>0.069</td><td>0.082</td><td>0.066</td><td>0.031</td><td>0.031</td><td>-</td><td></td><td></td><td></td><td></td></tr><tr><th>(7) P. waka MUBI 2611*</th><td>0.069</td><td>0.082</td><td>0.066</td><td>0.031</td><td>0.031</td><td>0.000</td><td>-</td><td></td><td></td><td></td></tr><tr><th>(8) P. shurugojalcapi MUBI 17727</th><td>0.058</td><td>0.074</td><td>0.080</td><td>0.079</td><td>0.079</td><td>0.079</td><td>0.079</td><td>-</td><td></td><td></td></tr><tr><th>(9) P. shurugojalcapi PFAUNA 430</th><td>0.058</td><td>0.074</td><td>0.080</td><td>0.079</td><td>0.079</td><td>0.079</td><td>0.079</td><td>0.000</td><td>-</td><td></td></tr><tr><th>(10) P. amazonensis MUBI 11473</th><td>0.057</td><td>0.072</td><td>0.085</td><td>0.078</td><td>0.078</td><td>0.072</td><td>0.072</td><td>0.037</td><td>0.037</td><td>-</td></tr></tbody></table>

Table 3 in Two new species of gymnophthalmid lizards of the genus Petracola (Squamata: Cercosaurinae) from the Andes of northeastern Peru, and their phylogenetic relationships

Table 3. Morphometric measurements of Petracola amazonensis and P. shurugojalcapi. * broken tail, ** regenerated tail.<table><tbody><tr><th></th><th>P. shurugojalcapi</th><th>P. amazonensis</th></tr><tr><th></th><th>PFAUNA 431</th><th>PFAUNA 427</th><th>PFAUNA 430</th><th>PFAUNA 429</th><th>MUBI 17727</th><th>MUBI 11485</th></tr></tbody><tbody><tr><th></th><td>Holotype</td><td>Paratype</td><td>Paratype</td><td>Paratype</td><td>Paratype</td><td>Holotype</td></tr><tr><th>Sex</th><td>Female</td><td>Male</td><td>Male</td><td>Female</td><td>Male</td><td>Female</td></tr><tr><th>SVL</th><td>51.0</td><td>48.5</td><td>44.0</td><td>47.4</td><td>50.8</td><td>43.0</td></tr><tr><th>LAL</th><td>26.7</td><td>24.5</td><td>24.6</td><td>26.3</td><td>26.2</td><td>21.6</td></tr><tr><th>LSA</th><td>15.5</td><td>19</td><td>15</td><td>14.8</td><td>18.2</td><td>14.8</td></tr><tr><th>TL</th><td>39.0 (**)</td><td>65.9 (**)</td><td>52.9</td><td>7.4 (*)</td><td>32.4 (**)</td><td>42.3</td></tr><tr><th>HL</th><td>9.3</td><td>10.7</td><td>8.9</td><td>8.4</td><td>10.5</td><td>9.3</td></tr><tr><th>HW</th><td>6.8</td><td>8.2</td><td>6.9</td><td>6.2</td><td>8.1</td><td>5.6</td></tr><tr><th>HH</th><td>5.3</td><td>6.3</td><td>5.4</td><td>5.1</td><td>6.1</td><td>4.6</td></tr><tr><th>FR</th><td>1.9</td><td>2.0</td><td>1.9</td><td>1.4</td><td>2</td><td>1.4</td></tr><tr><th>FN</th><td>2.6</td><td>2.7</td><td>2.1</td><td>2.5</td><td>2.6</td><td>2.5</td></tr></tbody></table>

Table 1 in Two new species of gymnophthalmid lizards of the genus Petracola (Squamata: Cercosaurinae) from the Andes of northeastern Peru, and their phylogenetic relationships

Table 1. Voucher museum specimens of Petracola lizards, mentioning their collection locations and GenBank codes sequences used in this study. All localities are from Peru.<table><tbody><tr><th>Species/voucher</th><th>Locality</th><th>12S</th><th>16S</th><th>ND4</th><th>cytb</th><th>c-mos</th></tr></tbody><tbody><tr><th>P. amazonensis MUBI 11473</th><td>Chiliquin, Chachapoyas, Amazonas</td><td>OR231541</td><td>OR231652</td><td>OR208583</td><td>OR198057</td><td>OR211561</td></tr><tr><th>P. shurugojalcapi MUBI 17727</th><td>La Jalca, Chachapoyas, Amazonas</td><td>OR231542</td><td>OR231653</td><td>-</td><td>OR198058</td><td>OR211562</td></tr><tr><th>P. shurugojalcapi PFAUNA 430</th><td>La Jalca, Chachapoyas, Amazonas</td><td>OR231543</td><td>OR231654</td><td>-</td><td>OR198059</td><td>OR211563</td></tr><tr><th>P. waka MUBI 2603</th><td>Baños del Inca, Cajamarca, Cajamarca</td><td>OR231544</td><td>OR231655</td><td>OR208584</td><td>OR198060</td><td>OR211564</td></tr><tr><th>P. waka MUBI 2605</th><td>Baños del Inca, Cajamarca, Cajamarca</td><td>OR231545</td><td>OR231656</td><td>OR208585</td><td>OR198061</td><td>OR211565</td></tr><tr><th>P. waka MUBI 2609</th><td>Type locality, Cajabamba, Cajamarca</td><td>OR231546</td><td>OR231657</td><td>OR208586</td><td>OR198062</td><td>-</td></tr><tr><th>P. waka MUBI 2611</th><td>Type locality, Cajabamba, Cajamarca</td><td>OR231547</td><td>OR231658</td><td>OR208587</td><td>OR198063</td><td>OR211566</td></tr></tbody></table>