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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
996
datasets available to search
ShareScore release 0.9.0
Dataset results
996 results for “mouse brain”
Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics
GEO Series GSE228394. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing; Other.
Gene expression data from mouse postnatal brain development
GEO Series GSE11528. Mus spretus; Mus musculus. 18 samples. Type: Expression profiling by array.
Effect of LRP1 deletion in vascular mural cells and APOE gentotype on gene expression in mouse brains
GEO Series GSE225065. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Early brain microRNA and mRNA expression profiles after neonatal hypoxic-ischemic injury in a mouse model [miRNA-Seq]
GEO Series GSE184939. Mus musculus. 24 samples. Type: Non-coding RNA profiling by high throughput sequencing.
LSD1 Corepressor Rcor2 Orchestrates Neurogenesis in the Developing Mouse Brain [RNA-Seq]
GEO Series GSE75038. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus RNA sequencing revealed the impact of post-mortem interval on the cellular component and gene expression analysis of mouse brains
GEO Series GSE285936. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Molecular Cartography of the Human and Mouse Down Syndrome Brain [snRNA-seq]
GEO Series GSE280175. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
RNA-Seq of Aged Polg Mutator Mouse Brains
GEO Series GSE55188. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180925_5E]
GEO Series GSE134653. Mus musculus. 1364 samples. Type: Methylation profiling by high throughput sequencing.
Gene expression profile at single cell level of CD45+ cells isolated from twitcher (twi) mouse brain (postnatal day 21)
GEO Series GSE233320. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome analysis of non-neuronal cell populations in mouse brain cortex
GEO Series GSE133283. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiling of cell subpopulations from different regions of the mouse brain
GEO Series GSE72826. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180206_4A]
GEO Series GSE131771. Mus musculus. 1302 samples. Type: Methylation profiling by high throughput sequencing.
Transcriptomic atlas and interaction networks of brain cells in mouse CNS demyelination and remyelination [Trem2KO]
GEO Series GSE204769. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA171213_4B]
GEO Series GSE131360. Mus musculus. 1262 samples. Type: Methylation profiling by high throughput sequencing.
Cell-type based analysis of microRNA profiles in the mouse brain
GEO Series GSE30286. Mus musculus. 19 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Responses of microglia in the mouse brain after ischemic stroke
GEO Series GSE234865. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Cannabinoid receptor type 2 expression in mouse brain: from mapping to regulation in microglia under inflammatory conditions [snRNA-seq]
GEO Series GSE247268. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome of RABV infected mouse brain
GEO Series GSE138164. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA181210_5C]
GEO Series GSE134967. Mus musculus. 1264 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.