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340
datasets available to search
ShareScore release 0.9.0
Dataset results
340 results for “plasmids”
Comparative genomic hybridization analysis shows different epidemiology of chromosomal and plasmid-borne cpe-carrying Clostridium perfringens type A strains
GEO Series GSE30954. Clostridium perfringens. 163 samples. Type: Genome variation profiling by array.
HeLa CD4+ cells transfected with epitope-tagged eTat plasmids
GEO Series GSE571. Homo sapiens. 16 samples. Type: Expression profiling by array.
RNAseq of ∆yacP (∆rae1) mutant and plasmid complemented strain
GEO Series GSE93894. Bacillus subtilis. 12 samples. Type: Expression profiling by high throughput sequencing.
MvaT family proteins encoded on IncP-7 plasmid pCAR1 and the host chromosome regulate host transcriptome cooperatively but differently (pCAR1)
GEO Series GSE72638. Pseudomonas; Pseudomonas putida. 9 samples. Type: Expression profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array.
Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1.
GEO Series GSE15217. Pseudomonas; Pseudomonas fluorescens Pf0-1; Pseudomonas putida KT2440; Pseudomonas aeruginosa PAO1. 9 samples. Type: Expression profiling by genome tiling array.
Complete Plasmid database
<p>Plasmid database used for the BLAST execution of benchmarking.</p>
Plasmid Loss data and scripts
<p>Plasmid loss data and corresponding scripts.</p>
Parasitic plasmids are anchored to inactive regions of eukaryotic chromosomes through a nucleosome signal [ChIP-seq]
GEO Series GSE246636. Saccharomyces cerevisiae. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
STARR-seq reporter activity of plasmid libraries delivered to mouse liver by hydrodynamic injection: In vivo MPRA assay for enhancer activity
GEO Series GSE267205. synthetic construct; Mus musculus. 39 samples. Type: Other.
Large conjugative plasmid mediates chromosomal Type VI secretion system cross transcriptional regulation and diverse bacterial pathogenicity [ChIP-Seq]
GEO Series GSE277926. Acinetobacter baumannii. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
High-resolution mapping of the pCAR1 plasmid transcriptomes in Pseudomonas
GEO Series GSE10862. Pseudomonas; Pseudomonas putida; Metapseudomonas resinovorans. 4 samples. Type: Expression profiling by array.
Gene Expression Time Courses of CH999 with High or Low Copy Number Plasmids
GEO Series GSE6096. Streptomyces coelicolor. 12 samples. Type: Expression profiling by array.
Expression data from HeLa cells transfected with plasmid expressing Salmonella effector SrfJ or HeLa cells transfected with the empty vector
GEO Series GSE215051. Homo sapiens. 6 samples. Type: Expression profiling by array.
Expression Data from ST2 cells transfected with a Wnt1 expressing plasmid
GEO Series GSE249300. Mus musculus. 2 samples. Type: Expression profiling by array.
MvaT family proteins encoded on IncP-7 plasmid pCAR1 and the host chromosome regulate host transcriptome cooperatively but differently (KT2440)
GEO Series GSE72637. Pseudomonas putida KT2440; Pseudomonas putida. 9 samples. Type: Expression profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array.
RNAseq analysis of EC109 cells transfected by lncRPL34-AS1 plasmid and scramble pcDNA
GEO Series GSE154450. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Plasmid-free Chlamydia trachomatis elicit lowered inflammation, delayed apoptosis, and reduced chemoattractant expression in HeLa cells compared to plasmid-containing wild type
GEO Series GSE56168. Homo sapiens. 66 samples. Type: Expression profiling by array.
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and non-antibiotic pharmaceuticals stressed E. coli K-12 LE392, P. putida KT2440, and RP4 plasmid Transcriptomes [experiment 2
GEO Series GSE131228. Pseudomonas putida KT2440; Plasmid RP4; Escherichia coli K-12. 9 samples. Type: Expression profiling by high throughput sequencing.
Enhanced plasmid mediated bioaugmentation of RDX contaminated matrices in column studies using donor strain Gordonia sp. KTR9
GEO Series GSE125551. Rhodococcus jostii RHA1; Gordonia sp. KTR9. 12 samples. Type: Expression profiling by array.
Production of rAAV by plasmid transfection induces antiviral and inflammatory responses in suspension HEK293
GEO Series GSE224405. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.