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4,243 results for “seasonality”
Figure 1 from: Haevermans T, Mantuano D, Zhou M-Y, Lamxay V, Haevermans A, Blanc P, Li D-Z (2020) Discovery of the first succulent bamboo (Poaceae, Bambusoideae) in a new genus from Laos' karst areas, with a unique adaptation to seasonal drought. PhytoKeys 156: 125-137. https://doi.org/10.3897/phytokeys.156.51636
Figure 1 Laobambos calcareus. A Adult plant in habitat at the type locality during rainy season B detail of foliage leaves C detail of the waxy marks on fresh inflated culms, revealing the ridges present on the dried-state culm during the dormant period D detail of a node and a branch complement E view of base of the clump showing the greenish inflated fresh live culms, along with ridged dehydrated brown dead culms. (Photo credit Thomas Haevermans 05/2012).
Figure 5 from: Haevermans T, Mantuano D, Zhou M-Y, Lamxay V, Haevermans A, Blanc P, Li D-Z (2020) Discovery of the first succulent bamboo (Poaceae, Bambusoideae) in a new genus from Laos' karst areas, with a unique adaptation to seasonal drought. PhytoKeys 156: 125-137. https://doi.org/10.3897/phytokeys.156.51636
Figure 5 Phylogenetic placement of Laobambos calcareus, adapted from Zhou et al. 2017 (the original "Genus indet" has been replaced here by the newly described name).
Figure 4 from: Haevermans T, Mantuano D, Zhou M-Y, Lamxay V, Haevermans A, Blanc P, Li D-Z (2020) Discovery of the first succulent bamboo (Poaceae, Bambusoideae) in a new genus from Laos' karst areas, with a unique adaptation to seasonal drought. PhytoKeys 156: 125-137. https://doi.org/10.3897/phytokeys.156.51636
Figure 4 Scheme detailing Laobambos calcareus culm architecture illustrating the much elongated first internode, alternate branching with branch diameter matching the diameter of adjacent culm segment, and length of branches not exceeding the total length of the culm. (Illustration credit Agathe Haevermans).
Figures 3-5 from: França LF, Figueiredo-Paixão V, Duarte-Silva TA, Santos K (2020) The effects of rainfall and arthropod abundance on breeding season of insectivorous birds, in a semi-arid neotropical environment. Zoologia 37: 1-7. https://doi.org/10.3897/zoologia.37.e37716
Figures 3-5 (3) Aerial arthropod biomass, (4) accumulated precipitation and (5) active brood patches, during 27 sampling events. Data recorded between October 2015 and October 2016, with 14-day intervals, in an area of seasonally dry Neotropical forest in northeastern Brazil. The biomass were converted to proportion using the ratio between abundance at each sampling event and total abundance during the study. Brood patch was converted to proportion using the ratio between individuals with brood patches and total individuals captured during a sampling event. *In one month, we had three, instead of two, monthly samplings as a result of the 14-day interval between samples.
Figures 1-2 from: França LF, Figueiredo-Paixão V, Duarte-Silva TA, Santos K (2020) The effects of rainfall and arthropod abundance on breeding season of insectivorous birds, in a semi-arid neotropical environment. Zoologia 37: 1-7. https://doi.org/10.3897/zoologia.37.e37716
Figures 1-2 (1) Biomass and (2) number of arthropods recorded during 27 sampling events. Solid lines represent the aerial arthropods (windowpane trap and suction sampler), while dashed lines show terrestrial arthropod (pitfall trap). Data recorded between October 2015 and October 2016, with 14-day intervals, in an area of seasonally dry Neotropical forest, in northeastern Brazil. The abundance (biomass and number) were converted to proportion using the ratio between abundance at each sampling event and total abundance during the study. *In one month, we had three, instead of two, monthly samplings as a result of the 14-day interval between samples.
Regional wind patterns likely shape a seasonal migration detour
<p>Migrating animals should optimise time and energy use when migrating, travelling directly to their destination. Detours from the most direct route may arise however because of barriers and weather conditions. Identifying how such situations arise from variable weather conditions is crucial to understand population response in the light of increased anthropogenic climate change. Here we used light-level geolocators to follow Cyprus wheatears for their full annual cycle in two separate years migrating between Cyprus, over the Mediterranean and the Sahara to winter in north-east sub-Saharan Africa. We predicted that any route detours would be related to wind conditions experienced during migration. We found that spring migration for all birds included an eastern detour, whilst autumn migrations were direct across the Sahara. The direct autumn migration was likely a consequence of consistent tail-winds, whilst the eastern detour in spring is likely to be more efficient given the wind conditions which are against a direct route. Such variable migration routes shaped by coincidence with prevailing winds are probably common suggesting that some birds may be able to adapt to future changes in wind conditions.</p>
Wild flies hedge their thermal preference bets in response to seasonal fluctuations
<p>Data and analysis scripts for the manuscript entitled "Wild flies hedge their thermal preference bets in response to seasonal fluctuations" by Jamilla Akhund-Zade et al. </p>
Data from: Warmer and drier fire seasons contribute to increases in area burned at high severity in western US forests from 1985-2017
<p>Increases in burned area across the western US since the mid-1980's have been widely documented and linked partially to climate factors, yet evaluations of trends in <i>fire severity</i> are lacking. Here, we evaluate fire severity trends and their interannual relationships to climate for western US forests from 1985-2017. Significant increases in annual area burned at high severity (AAB<sub>hs</sub>) were observed across most ecoregions, with an overall eight-fold increase in AAB<sub>hs</sub> across all western US forests. The relationships we identified between the annual fire severity metrics and climate, as well as the observed and projected trend toward warmer and drier fire seasons, suggest that climate change will contribute to increased fire severity in future decades where fuels remain abundant. The growing prevalence of high-severity fire in western US forests has important implications to forest ecosystems, including an increased probability of fire-catalyzed conversions from forest to alternative vegetation types.</p>
Data from: Movement and seasonal energetics mediate vulnerability to disturbance in marine mammal populations
<p>In marine environments noise from human activities is increasing dramatically, causing animals to alter their behavior and forage less efficiently. These alterations incur energetic costs that can result in reproductive failure, death, and may ultimately influence population viability; yet the link between population dynamics and individual energetics is poorly understood. We present an energy budget model for simulating effects of acoustic disturbance on populations. It accounts for environmental variability and individual state, while incorporating realistic animal movements. Using harbor porpoises (<i>Phocoena phocoena</i>) as a case study, we evaluated population consequences of disturbance from seismic surveys and investigated underlying drivers of vulnerability. The framework reproduced empirical estimates of population structure and seasonal variations in energetics. The largest effects predicted for seismic surveys were in late summer and fall, and were unrelated to local abundance, but instead to lactation costs, water temperature, and body fat. Our results demonstrate that consideration of temporal variation in individual energetics and their link to costs associated with disturbances is imperative when predicting disturbance impacts. These mechanisms are general to animal species, and the framework presented here can be used for gaining new insights into the spatiotemporal variability of animal movements and energetics that control population dynamics.</p>
Data from: Phenotypic plasticity, but not adaptive tracking, underlies seasonal variation in post-cold hardening freeze tolerance of Drosophila melanogaster
<p> In temperate regions, an organism's ability to rapidly adapt to seasonally varying environments is essential for its survival. In response to seasonal changes in selection pressure caused by variation in temperature, humidity, and food availability, some organisms exhibit plastic changes in phenotype. In other cases, seasonal variation in selection pressure can rapidly increase the frequency of genotypes that offer survival or reproductive advantages under the current conditions. Little is known about the relative influences of plastic and genetic changes in short lived organisms experiencing seasonal environmental fluctuations. Cold hardening is a seasonally relevant plastic response in which exposure to cool, but nonlethal, temperatures significantly increases the organism's ability to later survive at freezing temperatures. In the present study, we demonstrate seasonal variation in cold hardening in <em>Drosophila melanogaster</em> and test the extent to which plasticity and adaptive tracking underlie that seasonal variation. We measured the post-cold hardening freeze tolerance of flies from outdoor mesocosms over the summer, fall, and winter. We bred outdoor mesocosm-caught flies for two generations in the lab and matched each outdoor cohort to an indoor control cohort of similar genetic background. We cold hardened all flies under controlled laboratory conditions and then measured their post-cold hardening freeze tolerance. Comparing indoor and field-caught flies and their laboratory-reared G1 and G2 progeny allowed us to determine the roles of seasonal environmental plasticity, parental effects, and genetic changes on cold hardening. We also tested the relationship between cold hardening and other factors, including age, developmental density, food substrate, presence of antimicrobials, and supplementation with live yeast. We found strong plastic responses to a variety of field- and lab-based environmental effects, but no evidence of seasonally varying parental or genetic effects on cold hardening. We therefore conclude that seasonal variation in post-cold hardening freeze tolerance results from environmental influences and not genetic changes. </p>
Preparatory immunity: Seasonality of mucosal skin defenses and Batrachochytrium infections in Southern leopard frogs
<ol> <li>Accurately predicting the impacts of climate change on wildlife health requires a deeper understanding of seasonal rhythms in host–pathogen interactions. The amphibian pathogen, <em>Batrachochytrium dendrobatidis</em> (<em>Bd</em>), exhibits seasonality in incidence; however, the role that biological rhythms in host defences play in defining this pattern remains largely unknown.</li> <li>The aim of this study was to examine whether host immune and microbiome defences against <em>Bd</em> correspond with infection risk and seasonal fluctuations in temperature and humidity.</li> <li>Over the course of a year, five populations of Southern leopard frogs (<em>Rana</em> [<em>Lithobates</em>] <em>sphenocephala</em>) in Tennessee, United States, were surveyed for host immunity, microbiome and pathogen dynamics. Frogs were swabbed for pathogen load and skin bacterial diversity and stimulated to release stored antimicrobial peptides (AMPs). Secretions were analysed to estimate total hydrophobic peptide concentrations, presence of known AMPs and effectiveness of <em>Bd</em> growth inhibition in vitro. The diversity and proportion of bacterial reads with a 99% match to sequences of isolates known to inhibit <em>Bd</em> growth in vitro were used as an estimate of predicted anti‐<em>Bd</em> function of the skin microbiome.</li> <li> <em>Batrachochytrium dendrobatidis</em> dynamics followed the expected seasonal fluctuations—peaks in cooler months—which coincided with when host mucosal defences were most potent against <em>Bd</em>. Specifically, the concentration and expression of stored AMPs cycled synchronously with <em>Bd</em> dynamics. Although microbiome changes followed more linear trends over time, the proportion of bacteria that can function to inhibit <em>Bd</em> growth was greatest when risk of <em>Bd</em> infection was highest.</li> <li>We interpret the increase in peptide storage in the fall and the shift to a more anti‐<em>Bd</em> microbiome over winter as a preparatory response for subsequent infection risk during the colder periods when AMP synthesis and bacterial growth is slow and pathogen pressure from this cool‐adapted fungus is high. Given that a decrease in stored AMP concentrations as temperatures warm in spring likely means greater secretion rates, the subsequent decrease in prevalence suggests seasonality of <em>Bd</em> in this host may be in part regulated by annual immune rhythms, and dominated by the effects of temperature.</li> </ol> <p> </p> <p> </p>
Data from: Seasonal variability of groundwater level effects on the growth of Carex cinerascens in lake wetlands
Groundwater level is crucial for wetland plant growth and reproduction, but the extent of its effect on plant growth can vary along with changed precipitation and temperature at different seasons. In this context, we investigated the effect of two groundwater levels (10 cm vs. 20 cm depth) on growth and reproductive parameters of Carex cinerascens, a dominant plant species in the Poyang Lake wetland, during three seasons (spring, summer and autumn) and during two consecutive years (2015 and 2016). Carex cinerascens showed low stem number, height, individual and population biomass in summer compared to spring and autumn. Lower groundwater depth was overall more suitable for plant growth resulting in higher stem height and biomass. However, the interactive effect between groundwater level and season clearly demonstrated that the effect of groundwater level on plant growth occurred mainly in autumn. After the withering of the plant population in summer, we observed that C. cinerascens growth recovered in autumn to similar values observed in spring only with 10 cm groundwater level. By consequence, we could deduce that lowering groundwater level in the studied Poyang Lake wetland will negatively impact C. cinerascens regeneration and growth particularly during the second growth cycle occurring in autumn. Additionally, our results also showed that, independently of the season and groundwater level, population biomass of C. cinerascens was lower during drier year. Altogether, our findings suggest that water limitation due to both reduction in precipitation and decreased groundwater level during the year can strongly impact plant communities.
Figures 1-2 from: Guedes GHS, Salgado FLK, Uehara W, de Pavia Ferreira DL, Araújo FG (2020) The recapture of Leptopanchax opalescens (Aplocheiloidei: Rivulidae), a critically endangered seasonal killifish: habitat and aspects of population structure. Zoologia 37: 1-8. https://doi.org/10.3897/zoologia.37.e54982
Figures 1-2 Specimens of Leptopanchax opalescens: (1) female, 24.0 mm TL, hyaline bode and fins; (2) male, 28.8 mm TL). Letters indicating patterns of body and fin color in male: (a) red band on the distal margins of the dorsal and anal fins; (b) gold band below and parallel to the red band in the dorsal fin; (c) red body with diffuse light spots; (d) vermiculate red spots in the anal fin. More photos are available in the Fig. S1). Scale bar: 5 mm.
Supplementary material 2 from: Guedes GHS, Salgado FLK, Uehara W, de Pavia Ferreira DL, Araújo FG (2020) The recapture of Leptopanchax opalescens (Aplocheiloidei: Rivulidae), a critically endangered seasonal killifish: habitat and aspects of population structure. Zoologia 37: 1-8. https://doi.org/10.3897/zoologia.37.e54982
Table S1. References for the occurrence of Leptopanchax opalescens and synonyms as shown in Fig, 2.
Figure 6 from: Guedes GHS, Salgado FLK, Uehara W, de Pavia Ferreira DL, Araújo FG (2020) The recapture of Leptopanchax opalescens (Aplocheiloidei: Rivulidae), a critically endangered seasonal killifish: habitat and aspects of population structure. Zoologia 37: 1-8. https://doi.org/10.3897/zoologia.37.e54982
Figure 6 Length-weight relationship (LWR) of Leptopanchax opalescens in the Guandu River Basin, state of Rio de Janeiro, Brazil.
Figure 5 from: Guedes GHS, Salgado FLK, Uehara W, de Pavia Ferreira DL, Araújo FG (2020) The recapture of Leptopanchax opalescens (Aplocheiloidei: Rivulidae), a critically endangered seasonal killifish: habitat and aspects of population structure. Zoologia 37: 1-8. https://doi.org/10.3897/zoologia.37.e54982
Figure 5 Monthly average and standard deviation (vertical dashes) of the catch per unit area (CPUA: number of individuals/m2) of Leptopanchax. opalescens between November 2019 and April 2020.
Figures 3-4 from: Guedes GHS, Salgado FLK, Uehara W, de Pavia Ferreira DL, Araújo FG (2020) The recapture of Leptopanchax opalescens (Aplocheiloidei: Rivulidae), a critically endangered seasonal killifish: habitat and aspects of population structure. Zoologia 37: 1-8. https://doi.org/10.3897/zoologia.37.e54982
Figures 3-4 (3) Map of recorded occurrences of Leptopanchax opalescens in the state of Rio de Janeiro, Brazil (red dots). The black dot indicates the new record in this study. References of occurrences (1, base of the Serra de Petropolis; 2, villages of Cava and Tinguá; 3, Horto Florestal Santa Cruz, in Seropédica, RJ; 4, Training camp of the Brazilian Army in Gericinó, Rio de Janeiro; and 5, a terrain of the BRF S.A. in Seropédica, Rio de Janeiro) available in the Table S1. (4) Photographic record of temporary pools flooded with marginal vegetation predominantly composed of grasses, in the municipality of Seropédica, RJ.
Seasonal dietary niche contraction in coexisting Neotropical frugivorous bats (Stenodermatinae)
<p>Tropical dry forests are characterized by punctuated seasonal precipitation patterns that drive primary production and the availability of fruits, seeds, flowers, and insects throughout the year. In environments in which the quantity and quality of food resources varies seasonally, consumers should adjust their foraging behavior to maximize energy intake while minimizing overlap with competitors during periods of low food availability. Here, we investigated how the diets of frugivorous bats in tropical dry forests of NW Mexico varied in response to seasonal availability and how this affected dietary overlap of morphologically similar species. We performed stable isotope analyses to understand temporal and interspecific patterns of overall isotopic niche breadth, trophic position, and niche overlap in the diet of six frugivorous species of closely related New World Leaf-nosed Bats (family Phyllostomidae, subfamily Stenodermatinae). We estimated seasonal changes in resource abundance in two complementary ways: 1) vegetative phenology based on long-term remote-sensing data, and 2) observational data on food availability from previously published insect and plant fruiting surveys. In all species, there was a consistent pattern of reduced isotopic niche breadth during periods of low food availability. However, patterns of niche overlap varied between morphologically similar species. Overall, results from our study and others suggest that seasonal food availability likely determines overall dietary niche breadth in Phyllostomidae and that despite morphological specialization, it is likely that other mechanisms, such as opportunistic foraging and spatiotemporal niche segregation may play a role in maintaining coexistence rather than simply dietary displacement.</p>
Data from: Greater sage-grouse survival varies with breeding season events in West Nile virus non-outbreak years
<p>Greater Sage-Grouse (Centrocercus urophasianus) are a species of conservation concern and are highly susceptible to mortality from West Nile virus (WNV). Culex tarsalis, a mosquito species, is the suspected primary vector for transmitting WNV to sage-grouse. We captured, radio-tagged, and monitored female sage-grouse to estimate breeding season (April 15‒September 15) survival 2016-2017. Deceased sage-grouse were tested for active WNV; live captured and hunter harvested sage-grouse were tested for WNV antibody titers. Additionally, we trapped mosquitoes with CO2 baited traps 4 nights per week (542 trap nights) to estimate WNV minimum infection rate (MIR). Eight sage-grouse mortalities occurred during the WNV seasons of 2016 and 2017; 5 had recoverable tissue, and one of 5 tested positive for WNV infection. Survival varied temporally with sage-grouse biological seasons, not WNV seasonality. Survival was 0.68 (95% CI= 0.56–0.78; n=74) during the reproductive season (April 1−September 15). Mammalian predators were the leading suspected cause of mortality (40%), followed by unknown cause (25%), avian predation (15%), unknown predation (15%), and WNV (5%). These results indicate WNV was not a significant driver of adult sage-grouse survival during this study. Three sage-grouse (1.9%; 95% CI=0.5−5.9%) contained WNV antibodies. We captured 12,472 mosquitoes of which 3,933 (32%) were Culex tarsalis. Estimated WNV MIR of Culex tarsalis during 2016 and 2017 was 3.3 and 1.6, respectively. Our results suggest sage-grouse in South Dakota have limited exposure to WNV, and WNV was not a significant source of sage-grouse mortality in South Dakota during 2016 and 2017. Based on our finding that a majority of sage-grouse in South Dakota are susceptible to WNV infection, WNV could potentially have an impact on the population during an epizootic event; however, when WNV is at or near endemic levels, it appears to have little impact on sage-grouse<br> survival. </p>
Habitat-specific survival of golden-winged warblers (Vermivora chrysoptera) during the non-breeding season in an agricultural landscape
<p>Nearctic-Neotropical migratory birds are considered priority species for conservation because they are subject to threats at distinct breeding, migratory and stopover locations throughout their annual cycle, and many species have undergone severe population declines. Research during the non-breeding season has focused on identifying the locations and habitats that migrants use, but wintering migrants are known to occupy habitats of both high and low quality, especially when the best sites are saturated by conspecifics. Thus, the presence or abundance of a species may not be a reliable indicator of winter habitat quality. The habitat associations of the golden-winged warbler <i>Vermivora chrysoptera</i>, a Nearctic-Neotropical migrant bird species of elevated conservation concern, are relatively well studied, yet conservation efforts are hindered by lack of information about basic demographic rates. In particular, no published estimates exist for non-breeding season survival, which can be a key vital rate affecting population viability, nor how survival rates vary among habitats, which is important to designing conservation programs to support populations during the winter period. We studied a color-banded population of golden-winged warblers in Costa Rica over a 3-year period and estimated overall survival rates, and the effects of habitat characteristics on survival. We found that monthly survival of juveniles (0.881) was lower than adult birds (0.978). Monthly survival during the non-breeding season (0.967) was higher than monthly survival during the rest of the annual cycle (0.930). Survival was negatively related to canopy height, and we observed a significant quadratic effect where survival peaked at intermediate levels of vine tangles and dead hanging leaves, which corresponds to habitat features associated with abundance in prior studies at this same site. Our findings contribute to our existing knowledge about the potential impacts of winter-season events on Nearctic-Neotropical migratory bird populations, and also informs potential conservation strategies for wintering golden-winged warblers.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.