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477 results for “Molecular evolution”
Figure 6 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 6 - Pseudocrangonyx gudariensis Tomikawa & Sato, sp. n., holotype, male (3.9 mm), NSMT-Cr 24603. A pereopod 6, lateral view; B dactylus of pereopod 6, lateral view; C coxa–carpus of pereopod 6, lateral view; D propodus–dactylus of pereopod 6, lateral view; E dactylus of pereopod 7, lateral view.
Figure 4 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 4 - Pseudocrangonyx gudariensis Tomikawa & Sato, sp. n., holotype, male (3.9 mm), NSMT-Cr 24603. A maxilliped, dorsal view; B inner plate of maxilliped, dorsal view; C outer plate of maxilliped, dorsal view; D gnathopod 1, lateral view; E palmar margin of propodus and dactylus of gnathopod 1, medial view; F gnathopod 2, lateral view; G palmar margin of propodus and dactylus of gnathopod 2, medial view.
Figure 1 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 1 - Map showing the collection localities of the specimens examined in this study and type localities of the known Japanese Pseudocrangonyx species. The closed circles indicate the localities of the referred materials used for the phylogenetic analyses. The star in red denotes the type locality of the new species; in purple, Pseudocrangonyx shikokunis; in blue, Pseudocrangonyx kyotonis; and in green, Pseudocrangonyx yezonis. Names of localities are shown in Table 1.
Figure 3 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 3 - Pseudocrangonyx gudariensis Tomikawa & Sato, sp. n., holotype, male (3.9 mm), NSMT-Cr 24603. A antenna 1, medial view; B antenna 2, medial view; C upper lip, anterior view; D lower lip, ventral view; E left mandible, medial view; F right mandible, medial view; G maxilla 1, dorsal view; H maxilla 2, dorsal view.
Figure 5 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 5 - Pseudocrangonyx gudariensis Tomikawa & Sato, sp. n., holotype, male (3.9 mm), NSMT-Cr 24603. A pereopod 3, lateral view; B pereopod 4, lateral view; C pereopod 5, lateral view; D dactylus of pereopod 5, lateral view.
Figure 10 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 10 - Bayesian inference tree for 2,397 bp of nuclear 28S rRNA plus histone H3 and mitochondrial COI and 16S rRNA markers, with the map modified from Fig. 1. Numbers on nodes represent bootstrap values for maximum likelihood and Bayesian posterior probabilities. Specimen numbers are also shown in Fig. 1 and Table 1.
Figure 2 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 2 - Pseudocrangonyx gudariensis Tomikawa & Sato, sp. n., holotype, male (3.9 mm), NSMT-Cr 24603. Habitus, lateral view.
Fig. 3 in Evolution and systematics of Green Bush-crickets (Orthoptera: Tettigoniidae: Tettigonia) in the Western Palaearctic: testing concordance between molecular, acoustic, and morphological data
Fig. 3 Oscillograms of songs of the Tettigonia armeniaca complex (1–11), T. caudata (12), and T. uvarovi (13) recorded at two or three speeds: 1 T. armeniaca (AM: Djermuk, T = 19 °C), 2 T. armeniaca (TR: Saclidag Pass, T = 21.5 °C), 3 T. armeniaca (TR: Ispir, T = 17 °C) (monosyllabic type), 4 T. armeniaca (TR: Ispir, T = 17 °C) (disyllabic type), 5 T. armeniaca (AM: Saravan, T = 20–25 °C) (outdoor recording), 6 T. armeniaca (AM: Lermontovo vill., T = 20 °C), 7 T. armeniaca (TR: Savsat–Ardahan, T = 26 °C), 8 T. armeniaca (TR: Savsat– Ardahan, T = 26 °C) (variable echeme length), 9 T. armeniaca (TR: Ispir, T = 17 °C) (polysyllabic type of variable length), 10 T. armeniaca (TR: Pulumur, T = 20–22 °C) (shorter echemes), 11 T. armeniaca (TR: Pulumur, T = 20–22 °C) (the same specimen as in 10 longer echemes), 12 T. caudata (GR: Drama; from Massa et al. 2012, T = 25 °C), and 13 T. uvarovi (South Korea; from Kim 2009 as T. dolichoptera; see Rhee 2013). Scale bar for A is 10 s; for B, 2 s; and for C, 200 ms
Supplementary material 5 from: Zhou T, Jin X-H (2018) Molecular systematics and the evolution of mycoheterotrophy of tribe Neottieae (Orchidaceae, Epidendroideae). In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 39-49. https://doi.org/10.3897/phytokeys.94.21346
Alignment of matK : Data type: Fasta file.
Supplementary material 4 from: Zhou T, Jin X-H (2018) Molecular systematics and the evolution of mycoheterotrophy of tribe Neottieae (Orchidaceae, Epidendroideae). In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 39-49. https://doi.org/10.3897/phytokeys.94.21346
Alignment of ITS : Data type: Fasta file.
Supplementary material 3 from: Zhou T, Jin X-H (2018) Molecular systematics and the evolution of mycoheterotrophy of tribe Neottieae (Orchidaceae, Epidendroideae). In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 39-49. https://doi.org/10.3897/phytokeys.94.21346
Table 3 : Data type: Word document.
Supplementary material 2 from: Zhou T, Jin X-H (2018) Molecular systematics and the evolution of mycoheterotrophy of tribe Neottieae (Orchidaceae, Epidendroideae). In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 39-49. https://doi.org/10.3897/phytokeys.94.21346
Table 2 : Data type: Word document.
Supplementary material 1 from: Zhou T, Jin X-H (2018) Molecular systematics and the evolution of mycoheterotrophy of tribe Neottieae (Orchidaceae, Epidendroideae). In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 39-49. https://doi.org/10.3897/phytokeys.94.21346
Table 1 : Data type: Word document.
Supplementary material 6 from: Zhou T, Jin X-H (2018) Molecular systematics and the evolution of mycoheterotrophy of tribe Neottieae (Orchidaceae, Epidendroideae). In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 39-49. https://doi.org/10.3897/phytokeys.94.21346
Alignment of rbcL : Data type: Fasta file.
Figure 6 from: Chew M, Abdul Rahim A, Mohd Yusof NY (2018) A new species of Eisothistos (Isopoda, Cymothoida) and first molecular data on six species of Anthuroidea from the Peninsular Malaysia. Zoosystematics and Evolution 94(1): 73-81. https://doi.org/10.3897/zse.94.23000
Figure 6 A–D. Expanathura collaris. A. female. B. male. C. pleotelson. D. uropodal exopod. E–H. Accalathura borradailei. E. female. F. male. G. uropodal exopod. H. pleotelson. All scales represent 0.1 mm.
Figure 1 from: Chew M, Abdul Rahim A, Mohd Yusof NY (2018) A new species of Eisothistos (Isopoda, Cymothoida) and first molecular data on six species of Anthuroidea from the Peninsular Malaysia. Zoosystematics and Evolution 94(1): 73-81. https://doi.org/10.3897/zse.94.23000
Figure 1 A–D. Apanthura pariensis. A. female. B. male. C. pleotelson. D. uropodal exopod. E. Mesanthura quadrata. All scales represent 0.1 mm.
Figure 1 from: Zhou T, Jin X-H (2018) Molecular systematics and the evolution of mycoheterotrophy of tribe Neottieae (Orchidaceae, Epidendroideae). In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 39-49. https://doi.org/10.3897/phytokeys.94.21346
Figure 1 Phylogram obtained from Bayesian Inference analysis of combined nrDNA ITS, matK and rbcL data. Numbers at nodes are Bayesian posterior probabilities and bootstrap percentages (≥ 50%), respectively. ''–'' indicates that the node was not supported in MP analysis, asterisk (*) represent 100% support and red colour denotes species that are mycotrophic herbs.
Supplementary material 4 from: Bragança PHN, Amorim PF, Costa WJEM (2018) Pantanodontidae (Teleostei, Cyprinodontiformes), the sister group to all other cyprinodontoid killifishes as inferred by molecular data. Zoosystematics and Evolution 94(1): 137-145. https://doi.org/10.3897/zse.94.22173
Substitution models according to JModeltest 2.1.7 :
Supplementary material 1 from: Bragança PHN, Amorim PF, Costa WJEM (2018) Pantanodontidae (Teleostei, Cyprinodontiformes), the sister group to all other cyprinodontoid killifishes as inferred by molecular data. Zoosystematics and Evolution 94(1): 137-145. https://doi.org/10.3897/zse.94.22173
List of species, localities and respective Genbank accession numbers :
Supplementary material 1 from: Arifin U, Smart U, Hertwig ST, Smith EN, Iskandar DT, Haas A (2018) Molecular phylogenetic analysis of a taxonomically unstable ranid from Sumatra, Indonesia, reveals a new genus with gastromyzophorous tadpoles and two new species. Zoosystematics and Evolution 94(1): 163-193. https://doi.org/10.3897/zse.94.22120
List of sequences and GenBank accession number : Data type: molecular data
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