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391
datasets available to search
ShareScore release 0.9.0
Dataset results
391 results for “Spatial analysis”
Visium spatial gene expression analysis for human ureters
GEO Series GSE184112. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
In-Depth Patient-specific Analysis of Tumor Heterogeneity in Melanoma Brain Metastasis: Insights from Spatial Transcriptomics and Multi-Region Bulk Sequencing
GEO Series GSE275731. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analysis of liver-innervating cholinergic neurons
GEO Series GSE255552. Mus musculus. 2 samples. Type: Other.
Data from: Spatial analysis of gene regulation reveals new insights into the molecular basis of upper thermal limits
Open the record for dataset details and reuse information.
Spatial analysis of microRNA regulation at defined tumor hypoxia levels reveals biological traits of aggressive prostate cancer
GEO Series GSE256390. Homo sapiens. 91 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma
GEO Series GSE272833. Homo sapiens. 4 samples. Type: Other.
De novo analysis of bulk RNA-seq data at spatially resolved single-cell resolution
GEO Series GSE192999. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (Spatial Gene Expression)
GEO Series GSE234271. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing; Other.
Parallel spatial transcriptomics, single-cell and bulk RNA-Seq analysis of the human embryonic HSC niche, the dorsal aorta
GEO Series GSE151877. Homo sapiens. 44 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analysis of Nf1+/- mouse brain
GEO Series GSE263303. Mus musculus. 4 samples. Type: Other.
Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma
GEO Series GSE144240. Homo sapiens. 105 samples. Type: Expression profiling by high throughput sequencing; Other.
Light-Assisted Single-Stranded Open-Chromatin Analysis in K562 and Spatially Localized Neuronal Single Cells
GEO Series GSE232216. Homo sapiens; Mus musculus. 445 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Third-party reanalysis; Other; Methylation profiling by high throughput sequencing.
Comparative multi-omic analysis reveals conserved and derived mechanisms of fin and limb regeneration [spatial transcriptomics]
GEO Series GSE315990. Polypterus senegalus. 4 samples. Type: Other.
High-depth spatial transcriptome analysis by photo-isolation chemistry
GEO Series GSE143413. Mus musculus; Homo sapiens. 45 samples. Type: Expression profiling by high throughput sequencing.
A comprehensive spatial-temporal transcriptomic analysis of differentiating nascent mouse lens epithelial and fiber cells
GEO Series GSE113887. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Integrated analysis of single-cell and spatial transcriptomics in keloids
GEO Series GSE181297. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics analysis of soft tissue sarcomas.
GEO Series GSE212526. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics]
GEO Series GSE261958. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Other.
Unraveling epithelial cell heterogeneity in adamantinomatous craniopharyngioma using single-cell and spatially resolved analysis
GEO Series GSE215932. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics
GEO Series GSE158328. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.