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1,742 results for “activity data”
Exploring relationships between time of day and pollinator activity in the context of pesticide use - data
<p>Pesticide exposure can be harmful to insect pollinators and the ecosystem services they provide. As pesticide guidelines warn against applying such products when pollinators are active, it is important to determine how pollinator activity changes with the time of day and when the most appropriate time is to spray these chemicals. We walked transects from sunrise to sunset in oilseed rape (<em>Brassica napus</em> L.) fields in Ireland to capture the abundance of honeybees, bumblebees, solitary bees, and hoverflies across daylight hours. We also recorded the activity of representative species from the three bee groups at their nests across similar time periods to compare with field observations. Peak pollinator abundance was in the mid-afternoon with fewer individuals in the early morning and late evening for all groups. At the nest, we observed patterns of activity that broadly reflected field abundance but indicated that bees are active earlier and later than those observed on the crop. However, there were differences between pollinator groups. Overall, honeybee and solitary bee abundance and activity were found to peak in the middle of the day, while bumblebee abundance and activity were more consistent throughout daylight hours. Hoverflies were relatively abundant in the morning and increased in number towards the late afternoon and early evening. Our results confirm current recommendations that pesticide application should be avoided in the middle of the day when pollinators are most active. However, the diversity of responses within and between pollinator groups to time of day should be accounted for when shaping guidelines, and clearly defining optimal pesticide application timings for end users is difficult and needs further consideration as it will vary between regions and crops. Further research should also explore how time impacts pesticide efficacy and exposure of pollinators to residues post-application to allow full evaluation of how practical and beneficial timing of application may be when aiming to protect pollinators from pesticide exposure.</p>
Code & data of the paper "Data sampling via Active Learning in Cartesian Genetic Programming for Biomedical Data"
<p>Code & data of the paper "Data sampling via Active Learning in Cartesian Genetic Programming for Biomedical Data"</p> <p> </p>
Data from: Evidence for socially influenced and potentially actively coordinated cooperation by bumblebees
<p>Cooperation is common in animals, yet the specific mechanisms driving collaborative behaviour in different species remain unclear. We investigated the proximate mechanisms underlying the cooperative behaviour of bumblebees in two different tasks, where bees had to simultaneously push a block in an arena or a door at the end of a tunnel for access to reward. In both tasks, when their partner's entry into the arena/tunnel was delayed, bees took longer to first push the block/door, compared to control bees that learned to push alone. In the tunnel task, just before gaining access to reward, bees were more likely to face towards their partner than expected by chance or compared to controls. These results show that bumblebees' cooperative behaviour is not simply a by-product of individual efforts but is socially influenced. We discuss how bees' turning behaviours, e.g. turning around before first reaching the door when their partner was delayed and turning back towards the door in response to seeing their partner heading towards the door, suggest active coordination at its simplest level – i.e. bumblebees may have a basic understanding of their partner's role in cooperative tasks. Future studies are needed to help determine the complexity and limitations of this understanding.</p>
Data from: Pharmacological HIF-1 activation upregulates extracellular vesicle production synergistically with adiponectin through transcriptional induction and protein stabilization of T-cadherin
<p>Pharmacological activation of hypoxia-inducible factor 1alpha (HIF-1α), a hypoxia-responsive transcription factor, has attracted increasing attention due to its efficacy not only in renal anemia but also in various disease models. Our study demonstrated that a HIF-1 activator enhanced exosome production from cultured endothelial cells synergistically with adiponectin, an adipocyte-derived factor, through both transcriptional induction and posttranscriptional stabilization of an adiponectin binding partner, T-cadherin. Increased exosome levels were observed in wild-type mice but not in T-cadherin null mice after consecutive administration of roxadustat. Adiponectin- and T-cadherin-dependent increased exosome production may be involved in the pleiotropic effects of HIF-1 activators.</p>
Data to "Cardiopulmonary exercise testing complements both spirometry and nuclear imaging for assessing sarcoidosis disease stage and for monitoring disease activity"
<p>This record contains analysis scripts (written in Matlab) as well as raw and processed data to reproduce the results shown in:</p> <p>Torregiani, C., Reale, M., Confalonieri, M., Dore, F., Crisafulli, C., Baratella, E., ... & Maiello, G. (2024). Cardiopulmonary exercise testing complements both spirometry and nuclear imaging for assessing sarcoidosis stage and for monitoring disease activity. <em>Sarcoidosis, Vasculitis, and Diffuse Lung Diseases</em>, 41(1), e2024017-e2024017. https://doi.org/10.36141/svdld.v41i1.15125</p>
Data from: Major group-B enterovirus populations deleted in the noncoding 5' region of genomic RNA modulate activation of the type I interferon pathway in cardiomyocytes and induce myocarditis
<p>Major 5'-terminally deleted (5'TD) RNA forms of group-B coxsackievirus (CVB-5'TD) has been associated with myocarditis in both mice and humans. Although it is known that interferon-β (IFN-β) signaling is critical for an efficient innate immune response against CVB-induced myocarditis, the link between CVB-5'TD RNA forms and type I IFN signaling in cardiomyocytes remains to be explored. In a mouse model of CVB3/28-induced myocarditis, major early-emerging forms of CVB-5'TD RNA have been characterized as replicative viral populations that impair IFN-β production in the heart. Synthetic CVB3/28 RNA forms mimicking each of these major 5'TD virus populations were transfected in mice and have been shown to modulate innate immune responses in the heart and to induce myocarditis in mice. Remarkably, transfection of synthetic viral RNA with deletions in the secondary structures of the 5'-terminal CVB3 RNA domain I, modifying stem-loops "b", "c" or "d", were found to impair IFN-β production in human cardiomyocytes. In addition, the activation of innate immune response by Poly(I:C), was found to restore IFN-β production and to reduce the burden of CVB-5'TD RNA-forms in cardiac tissues, thereby reducing the mortality rate of infected mice. Overall, our results indicate that major early-emerging CVB3 populations deleted in the domain I of genomic RNA, in the 5' noncoding region, modulate the activation of the type I IFN pathway in cardiomyocytes and induce myocarditis in mice. These findings shed new light on the role of replicative CVB-5'TD RNA forms as key pathophysiological factors in CVB-induced human myocarditis.</p>
NMR data for "Application of a Hydrophobic Polyglutamate Bearing a Triphenylphosphine Group for the Orientation of Pharmaceutically Active Compounds and the Measurement of Residual Dipolar Couplings"
<p>NMR raw data for the work titled:</p> <p>"Application of a Hydrophobic Polyglutamate Bearing a Triphenylphosphine Group for the Orientation of Pharmaceutically Active Compounds and the Measurement of Residual Dipolar Couplings"</p> <p>The archive consists of NMR spectra of all compounds synthesized and the NMR spectra used for the determination of RDCs (isotropic and anisotropic).</p>
MOVMUS-UJI Dataset & ERGOMOVMUS: EMG and kinematics data of the hand in activities of daily living with special interest for ergonomics
<p>A dataset of <strong>human hand kinematics</strong> and <strong>forearm muscle activation</strong> collected during the performance of a wide variety of activities of daily living (ADLs) is presented, with tagged characteristics of products and tasks. A total of <strong>26 participants</strong> performed <strong>161 ADLs</strong>, selected to be representative of common elementary tasks, grasp types, product orientations and performance heights. 105 products were used, being varied regarding shape, dimensions, weight and type (common products and assistive devices).</p> <p>The data were recorded using CyberGlove instrumented gloves on both hands measuring 18 degrees of freedom on each and seven surface EMG sensors per arm recording muscle activity. The products and their arrangement were the same across subjects, and tasks were performed in a guided way. Data of <strong>more than 4100 ADLs</strong> is presented in this dataset as <strong>Matlab structures</strong> with full continuous recordings, which may be used in applications such as machine learning or to characterize healthy human hand behaviour.</p> <p>The dataset is accompanied with a <strong>custom data visualization application (ERGOMOVMUS)</strong> as a tool for ergonomics applications, allowing visualization and calculation of aggregated data from specific task, product and/or subjects’ characteristics.</p> <p> </p> <p><strong>v3.0 includes the following updates:</strong></p> <p>- Statistical summary of the recordings both in .xlsx and .ods file format (v1.1 only included it in .xlsx file format)</p> <p>- Updated experiment details in "MOVMUS-UJI DATASET GUIDE.pdf".</p>
The yin and yang of hsa-miR-1244 expression levels during activation of the UPR control cell fate - Raw data for label-free holographic microscopy
<p>Regulation of endoplasmic reticulum (ER) homeostasis plays a critical role in maintaining cell survival. When ER stress occurs, a network of three pathways called the unfolded protein response (UPR) is activated to reestablish homeostasis. While it is known that there is cross-talk between these pathways, how this complex network is regulated is not entirely clear. Using human cancer and non-cancer cell lines, two different genome-wide approaches, and two different ER stress models, we searched for miRNAs that were decreased during the UPR and surprisingly found only one, miR-1244, that was found in all these conditions. The activation of both UPR adaptive and apoptotic signaling pathway was confirmed by parallel genome-wide mRNA expression arrays for Calu 3 cells and next generation sequencing for 16HBE14o- cells. We also verified that ER-stress related downregulation of miR-1244 expression occurred with 5 different ER stressors and was confirmed in another human cell line (HeLa S3). These analyses demonstrated that the outcome of this reduction during ER stress supported both IRE1 signaling and elevated BIP expression. Further analysis also revealed that this novel miRNA impacted all three pathways of the UPR using inhibitors specific for IRE1, ATF6, and PERK. This is the first example of a complex mechanism by which this miRNA serves as a regulatory check point for all 3 pathways that is switched off after UPR activation. In summary, the results indicate that ER stress reduction of <em>miR-1244 </em>expression contributes to the pro-survival arm of UPR.</p> <p>For real-time monitoring of cell viability, we applied real-time and label-free holographic microscopy-based monitoring of cell death and viability using HoloMonitor M4<strong>®</strong> time-lapse cytometer (Phase Holographic Imaging PHI AB, Lund, Sweden). Holographic microscopy was used to follow the optical thickness and irregularity of cells exposed for up to 24 h to Tm or Tg in the presence or absence of <em>miR-1244 </em>mimic or antagomiR. The images from up to 8 independent optical fields were collected and analyzed according to manufacture instructions with HoloMonitor® App Suite software. Healthy cells are irregular in shape and thin, whereas dying cells are round and thick . For all analysis, the same cells parameters qualification was applied.</p> <p> </p> <p> </p> <p><strong>Figure 4. Overexpression of </strong><strong>miR-1244 promotes cell death. </strong>The results of real-time monitoring of cell viability are shown with the real time and label free holographic microscopy using a HoloMonitor M4<strong>®</strong> time-lapse cytometer of HeLa cells transfected with <em>miR-1244</em> mimic or inhibitor or the scramble control and 48 h later monitored up to 24 h. Images were collected every 15 min (from 8 independent optical fields), and the distribution of live (blue) and dying cells (red) based on their optical thickness (Y-axes) and irregularity (X-axes) is presented at the 0, 8, 16 and 24 h time points. The images from up to 5 independent optical fields were collected and analyzed according to manufacturer’s instructions with HoloMonitor® App Suite software. Representative samples are shown (<strong>A</strong>). For all analyses, the same cell parameter qualifications were applied. Experiments were performed in triplicate. Based on the cells irregularity and average optical thickness the percentages of healthy cells (<strong>B</strong>) and of dying cells (<strong>C</strong>) were calculated. Data represents the mean ± SE of three independent experiments. *<em>P</em>< 0.05, **<em>P</em>< 0.001, ***<em>P</em>< 0.0001 were considered significant.</p> <p><strong>Figure 5. </strong><strong>miR-1244 influences the fate of cells challenged with Tm induced ER stress. </strong>The results of real-time monitoring of cell viability with the real time and label free holographic microscopy are shown using a HoloMonitor M4<strong>®</strong> time-lapse cytometer of HeLa cells transfected with <em>miR-1244</em> mimic or inhibitor or the scramble control and 48 h later treated with Tm (2.5 µg/ml) up to 24 h. Images were collected every 15 min (from 5 independent optical fields), and the distribution of live (blue) and dying cells (red) based on their optical thickness (Y-axes) and irregularity (X-axes) is presented at the 0, 8, 16 and 24 h time points. The images from up to 5 independent optical fields were collected and analyzed according to manufacturer’s instructions with HoloMonitor® App Suite software. Representative samples are shown (<strong>A</strong>). For all analyses, the same cell parameter qualifications were applied. Experiments were performed in triplicate. Based on the cells irregularity and average optical thickness the percentages of healthy cells (<strong>B</strong>) and of dying cells (<strong>C</strong>) were calculated. <a name="OLE_LINK3"></a>Data represents the mean ± SE of three independent experiments. *<em>P</em>< 0.05, **<em>P</em>< 0.001, ***<em>P</em>< 0.0001 were considered significant.</p> <p><strong>Figure 6. Exogenous </strong><strong>miR-1244 influences the fate of cells challenged with Tg induced ER stress. </strong>The results of real-time monitoring of cell viability with the real time and label free holographic microscopy are shown using a HoloMonitor M4<strong>®</strong> time-lapse cytometer of HeLa cells transfected with <em>miR-1244</em> mimic or inhibitor or the scramble control and 48 h later treated with Tg (500 nM) up to 24 h. Images were collected every 15 min (from 5 independent optical fields), and the distribution of live (blue) and dying cells (red) based on their optical thickness (Y-axes) and irregularity (X-axes) is presented at the 0, 8, 16 and 24 h time points. The images from up to 5 independent optical fields were collected and analyzed according to manufacturer’s instructions with HoloMonitor® App Suite software. Representative samples are shown (<strong>A</strong>). For all analyses, the same cell parameter qualifications were applied. Experiments were performed in triplicate. Based on the cells irregularity and average optical thickness the percentages of healthy cells (<strong>B</strong>) and of dying cells (<strong>C</strong>) were calculated. Data represents the mean ± SE of three independent experiments. *<em>P</em>< 0.05, **<em>P</em>< 0.001, ***<em>P</em>< 0.0001 were considered significant.</p> <p> </p> <p> </p>
HPLC Data associated with PI3KC3-C1 activation paper
<p>HPLC data of bound nucleotides and nucleotide standards</p>
Code and data for 'Bacillus subtilis histidine kinase KinC activates biofilm formation by controlling heterogeneity of single-cell responses'
<p>Code and data used in the paper 'Bacillus subtilis histidine kinase KinC activates biofilm formation by controlling heterogeneity of single-cell responses' https://doi.org/10.1128/mBio.01694-21</p>
Environmental and AIS data collected during the EUMarineRobots Trans-National Access activities experiments using the NATO STO-CMRE Littoral Ocean Observatory Network testbed (Release 2)
<p>Environmental and AIS data collected during the second phase of EUMR TNA experiments using the CMRE LOON testbed. Environmental data consists of temperature measured across the water column; sound velocity measured close to the surface and close to the sea bottom; meteorological data at the surface (i.e., pressure, temperature, wind speed and direction, humidity and rain). The environmental dataset is complemented with Automatic Identification System (AIS) data for the ships transiting close to the LOON area (Gulf of La Spezia, Italy)</p> <p>Temperature measured across the water column in the LOON area (Gulf of La Spezia, Italy). The dataset includes measurements for:<br> i) June 9-11, 17-18, 25-26 - 2021<br> ii) July 5-7, 21-27, 30-31 - 2021<br> iii) August 3-5, 10-14, 19-21, 23-24, 28-30 - 2021</p> <p><br> Meteorological data at the surface (i.e., pressure, temperature, wind speed and direction, humidity and rain) in the LOON area (Gulf of La Spezia, Italy). The dataset includes measurements for:<br> i) June 9-11, 17-18, 25-26 - 2021<br> ii) July 5-7, 21-27, 30-31 - 2021<br> iii) August 3-5, 10-14, 19-21, 23-24, 28-30 - 2021</p> <p><br> Sound velocity measured close to the surface (SVP1) and close to the sea bottom (SVP2) in the LOON area (Gulf of La Spezia, Italy). The dataset includes measurements for:<br> i) June 9-11, 17-18, 25-26 - 2021<br> ii) July 5-7, 21-27, 30-31 - 2021<br> iii) August 3-5, 10-14, 19-21, 23-24, 28-30 - 2021</p> <p>SVP1 data missing for June 17-18 (2021) and July 5-7 (2021).</p> <p><br> Automatic Identification System (AIS) data for the ships transiting close to the LOON area (Gulf of La Spezia, Italy). The dataset includes AIS data for:<br> i) June 9-11 - 2021</p> <p>AIS recorded data not available after June 11, 2021</p> <p>For reference, see: "Environmental data collected on the CMRE LOON tested during the EUMR project: dataset description", Petroccia, Roberto; Zappa, Giovanni; Cimino, Giampaolo; Grati, Alberto; Alves, João. CMRE-DA-2021-001. July 2021, available at https://www.cmre.nato.int/research/publications/latest-techreports/1638-cmre-da-2021-001</p>
Data from: Microbial metabolic activity in two basins of the Gulf of Mexico influenced by mesoscale structures
<p>Information on microbial metabolic activity is essential for quantifying carbon and energy flows through marine food webs. We quantified community (R<sub>com</sub>) and prokaryotic (R<sub>pro</sub>) respiration rates, bacterial production (BP), bacterial abundance (BA), and bacterial growth efficiencies (BGE) in the Perdido and Coatzacoalcos basins of the Gulf of Mexico (GOM) during summer and winter conditions in 2016. Our results showed seasonal, regional, and mesoscale eddy influences on those metabolic variables. R<sub>pro</sub> accounted for more than 60% of total respiration in both regions, being three times higher in stations influenced by a cyclonic eddy (CE) in September (24.1 μM O<sub>2</sub> d<sup>-1</sup>) than in stations affected by an anticyclonic eddy in March (7.2 μM O<sub>2</sub> d<sup>-1</sup>) within the Coatzacoalcos basin where the eddy-trapping mechanism advected biomass-enriched waters from the Bay of Campeche. The eddy-stirring mechanism produced horizontal and vertical dipole patterns of metabolic variables increasing up to one order of magnitude R<sub>com</sub> and R<sub>pro</sub> while decreasing BGE to 25-fold from the southeastern to the northwestern edges in CEs. This finding indicates that dissolved organic matter is more actively taken up to build bacterial biomass on the eastern edge of CEs in the GOM, while respiration rates increase on the western edges. Satellite integrated primary production was coupled with surface respiration rates at CEs and no eddies. Bacterial production was mainly regulated by CEs and was about 50% higher in the Coatzacoalcos basin (~0.03–0.14 µmol C L<sup>-1</sup> d<sup>-1</sup>). BP increased in zones with high respiration rates, suggesting that R<sub>com</sub> is associated with heterotrophic prokaryote activity in both basins. Bacterial growth efficiency was lower than 25% within the upper 500 m during both cruises, but the highest values were quantified in the euphotic zone and during the September cruise. Metabolic variables integrated over the water column showed that 40–80% of the activity occurred between the base of the euphotic zone and 150 m depth. Our findings contribute to a better understanding of the metabolic activity of the microbial communities in two regions of the GOM influenced by mesoscale eddies.</p>
Data package for Pozzolanic activity quantification of hollow glass microspheres
<p>Raw data of calengorimetry, TGA, UCS and XRD tests developed as part of the research published in Cement and Concrete Composites. The dataset is deposited in a .zip file in .txt or .xls(.xlsx) file format.</p> <p>Linked publication:</p> <p>C.M. Martín, N.B. Scarponi, Y.A. Villagrán, D.G. Manzanal, T.M. Piqué,<br> Pozzolanic activity quantification of hollow glass microspheres,<br> Cement and Concrete Composites,<br> Volume 118,<br> 2021,<br> 103981,<br> ISSN 0958-9465,<br> https://doi.org/10.1016/j.cemconcomp.2021.103981.<br> (https://www.sciencedirect.com/science/article/pii/S0958946521000500)</p>
Single cell imaging of ERK and Akt activation dynamics and heterogeneity induced by G protein-coupled receptors - Scripts & Source data
<p>Source data and scripts to reproduce the figures that are part of the publication "Single cell imaging of ERK and Akt activation dynamics and heterogeneity induced by G protein-coupled receptors".</p> <p>Journal of Cell Science (2022) 135, jcs259685, DOI: 10.1242/jcs.259685</p> <p> </p> <p>An earlier version of this work is published as a preprint: "Heterogeneity and dynamics of ERK and Akt activation by G protein-coupled receptors depend on the activated heterotrimeric G proteins", DOI: <a href="https://doi.org/10.1101/2021.07.27.453948">10.1101/2021.07.27.453948</a></p>
Raw data for "Effect of MRgFUS treatment on cortical activity in Parkinson's disease: a fNIRS study"
<p>In this paper, a new combined approach, based on Magnetic Resonance-guided Focused Ultrasound Surgery (MRgFUS) technique and functional Near Infrared Spectroscopy (fNIRS), was applied for treatment and monitoring of patients affected by bilateral Parkinson’s disease (PD). On one side, MRgFUS enables non-invasive thalamotomy by combining FUS for tissue ablation and MR for targeting and monitoring. On the other side, fNIRS allows to monitor, non-invasively and without strict motion restriction even in a daily life environment, cortical neural activity related dynamics of both oxygenated and deoxygenated haemoglobin (HbO and HbR, respectively). In particular, the changes of cortical activation pattern in PD patients, with respect to age matched healthy control subjects, were analysed, while performing left and right hand finger tapping (LFT and RFT, respectively), before MRgFUS treatment, and at two different time intervals after the treatment. By comparison with the pre-treatment session, significant activations were predominantly observed one week after the treatment, with patterns recalling those of control group, and partially lost one month later, likely because of the neurodegenerative nature of PD. In addition, activations were more marked for LFT task, being the treatment performed on the right hemisphere. These results appear promising in view of the application of fNIRS for neurorehabilitation, especially in those clinical settings where traditional neuroimaging techniques cannot be applied.</p>
Raw Data for the article: Extracellular Vesicle-Derived microRNAs of Human Wharton's Jelly Mesenchymal Stromal Cells May Activate Endogenous VEGF-A to Promote Angiogenesis
<p>Despite low levels of vascular endothelial growth factor (VEGF)-A, the secretome of human Wharton's jelly (WJ) mesenchymal stromal cells (MSCs) effectively promoted proangiogenic responses in vitro, which were impaired upon the depletion of small (~140 nm) extracellular vesicles (EVs). The isolated EVs shared the low VEGF-A profile of the secretome and expressed five microRNAs, which were upregulated compared to fetal dermal MSC-derived EVs. These upregulated microRNAs exclusively targeted the <em>VEGF-A</em> gene within 54 Gene Ontology (GO) biological processes, 18 of which are associated with angiogenesis. Moreover, 15 microRNAs of WJ-MSC-derived EVs were highly expressed (Ct value ≤ 26) and exclusively targeted the thrombospondin 1 (<em>THBS1</em>) gene within 75 GO biological processes, 30 of which are associated with the regulation of tissue repair. The relationship between predicted microRNA target genes and WJ-MSC-derived EVs was shown by treating human umbilical-vein endothelial cells (HUVECs) with appropriate doses of EVs. The exposure of HUVECs to EVs for 72 h significantly enhanced the release of VEGF-A and THBS1 protein expression compared to untreated control cells. Finally, WJ-MSC-derived EVs stimulated in vitro tube formation along with the migration and proliferation of HUVECs. Our findings can contribute to a better understanding of the molecular mechanisms underlying the proangiogenic responses induced by human umbilical cord-derived MSCs, suggesting a key regulatory role for microRNAs delivered by EVs.</p>
Data from: Influence of Check Dams on the Activity Pattern and Morphometric Traits of Overwintering Tadpoles in the Western Himalaya
<p>Dataset for the paper: Influence of Check Dams on the Activity Pattern and Morphometric Traits of Overwintering Tadpoles in the Western Himalaya. See readme.txt for details.</p>
Compound activity data sets for 15 biological targets compiled from the ChEMBL and PubChem databases.
<p>Compound activity data sets for the 15 biological targets are deposited, along with structure-activity relationship matrices IDs. Active compounds were extracted from the ChEMBL database and inactive were from the PubChem database. Details of the data sets are described in the original publication. and the summary of the data sets is given in the readme.txt file. </p>
Experimental data from Dietler et al. (2022) "Signal Transduction in Light-Oxygen-Voltage Receptors Lacking the Active-Site Glutamine"
<p>This .xlsx file contains the experimental data underpinning the research reported in Dietler et al. (2022) "Signal Transduction in Light-Oxygen-Voltage Receptors Lacking the Active-Site Glutamine"</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.