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699
datasets available to search
ShareScore release 0.9.0
Dataset results
699 results for “biofilm.”
Transcriptional Profiling of Biofilm Regulators Identified by an Overexpression Screen in S. cerevisiae
GEO Series GSE98079. Saccharomyces cerevisiae. 20 samples. Type: Expression profiling by high throughput sequencing.
Sublethal Concentrations of Carbapenems Alter Cell Morphology and Genomic Expression of Klebsiella pneumoniae Biofilms
GEO Series GSE62045. Klebsiella pneumoniae. 6 samples. Type: Expression profiling by high throughput sequencing.
Cells released from Staphylococcus epidermidis biofilms interact differently from biofilm or planktonic cells with murine host immune system.
GEO Series GSE60992. Mus musculus. 10 samples. Type: Expression profiling by array.
Microbial activities associated with human intestinal mucosal biofilms change mRNAs and microRNAs to promote carcinogenesis in mice [RNA]
GEO Series GSE108156. Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional profiling of Pseudomonas aeruginosa WT and Pho mutant colony biofilms in response to ethanol and Candida albicans
GEO Series GSE192694. Pseudomonas aeruginosa. 24 samples. Type: Expression profiling by high throughput sequencing.
ChIP-seq of Ndt80 in a C. albicans, C. dubliniensis and C. tropicalis during biofilm formation in different media
GEO Series GSE161136. Candida albicans; Candida dubliniensis; Candida tropicalis. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The impact of Candida albicans on the transcriptome of Enterococcus faecalis when grown in a biofilm
GEO Series GSE290415. Enterococcus faecalis OG1RF. 6 samples. Type: Expression profiling by high throughput sequencing.
Staphylococcus epidermidis biofilms transcriptome alterations upon incubation with whole human blood
GEO Series GSE52111. Staphylococcus epidermidis. 5 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq analysis of active anthraquinones as anti-biofilm agents of methicillin-resistant Staphylococcus aureus
GEO Series GSE147157. Staphylococcus aureus. 9 samples. Type: Expression profiling by high throughput sequencing.
Biofilms of the PAH-degrading Sphingomonas sp. LH128 on solute stress when actively degrading and growing on phenanthrene
GEO Series GSE38296. Sphingomonas sp. LH128. 9 samples. Type: Expression profiling by array.
ZCF32, a fungus specific Zn(II)2-Cys6 transcription factor, is a major regulator of the biofilm circuit in the human pathogen Candida albicans
GEO Series GSE76165. Candida albicans. 4 samples. Type: Expression profiling by array.
L-rhamnose globally changes the transcriptome of planktonic and biofilm Escherichia coli cells and modulates biofilm growth
GEO Series GSE274311. Escherichia coli. 48 samples. Type: Expression profiling by high throughput sequencing.
Vibrio vulnificus : biofilm cells vs. planktonic cells
GEO Series GSE59753. Vibrio vulnificus; Vibrio vulnificus CMCP6. 6 samples. Type: Expression profiling by array.
An Improved Bacterial Single-cell RNA-seq Reveals Biofilm Heterogeneity [scRNA-seq]
GEO Series GSE260457. Staphylococcus aureus; Escherichia coli str. K-12 substr. MG1655; Caulobacter vibrioides NA1000. 19 samples. Type: Expression profiling by high throughput sequencing.
The cell wall lipoprotein CD1687 acts as a DNA binding protein during deoxycholate-induced biofilm formation in Clostridioides difficile
GEO Series GSE218475. Clostridioides difficile. 16 samples. Type: Expression profiling by high throughput sequencing.
Characterization of the cellular adaptation during biofilm formation in Gram positive bacteria
GEO Series GSE162709. Staphylococcus aureus; Enterococcus faecalis. 48 samples. Type: Expression profiling by high throughput sequencing.
Pneumococci in the heart subvert the host response through biofilm-mediated macrophage killing
GEO Series GSE86118. Streptococcus pneumoniae TIGR4; Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of Streptococcus gordonii strain Challis DL1 indicates a role for the biofilm-associated fruRBA operon in response to Candida albicans hyphae formation
GEO Series GSE68752. Streptococcus gordonii. 2 samples. Type: Expression profiling by array.
The glutathione-disrupted biofilm of clinical Pseudomonas aeruginosa strains: enhanced antibiotic affect and a novel biofilm transcriptome
GEO Series GSE75334. Pseudomonas aeruginosa AES-1R. 4 samples. Type: Expression profiling by high throughput sequencing.
Biofilm transcriptional pathways in the model symbiont Vibrio fischeri
GEO Series GSE237189. Aliivibrio fischeri. 15 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.