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325 results for “network structure”

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zenodo24/100

Effective Molecular Dynamics from Neural-Network Based Structure Prediction Models

<p>Molecular dynamics simulation (61.5 us) data of 28 one- and two-domain proteins from Jussupow &amp; Kaila: Effective Molecular Dynamics from Neural-Network Based Structure Prediction Models</p>

opencc-by-4.0Oct 2022View details →
zenodo24/100

Figure 1 of the paper "Multi-level structure of the First Tuesday communities after the 2000 dot-com crash: A social network analysis of economic actors based on web archives"

<p><span><span><span><span><span><span><span><span>The temporal evolution of the </span></span></span></span></span></span><span><span><span><span><span><span>firsttuesday.com </span></span></span></span></span></span><span><span><span><span><span><span>website </span></span></span></span></span></span><span><span><span><span><span><span>reconstructed from a collection of web archives by using the web cernes approach (Lobb&eacute; 2023). The website grows from the center of the figure in 1999</span></span></span></span></span></span><span><span><span><span><span><span>, </span></span></span></span></span></span><span><span><span><span><span><span>then splits into sub-sections. It </span></span></span></span></span></span><span><span><span><span><span><span>was gradually</span></span></span></span></span></span><span><span><span><span><span><span> abandoned after 2004 before being erased in 2010. The blue, green, and orange </span></span></span></span></span></span><span><span><span><span><span><span>sections </span></span></span></span></span></span><span><span><span><span><span><span>represent the sections where the First Tuesday meetings were announced.</span></span></span></span></span></span></span></span></p>

opencc-by-4.0Apr 2024View details →
zenodo24/100

Dataset from: Structure-based prediction of protein-nucleic acid binding using graph neural networks

<p>Datasets used for training/evaluating the neural network models described in our article. Additional documentation related to how these datasets were constructed can be found in the github repository https://github.com/jaredsagendorf/pnabind/tree/master/datasets</p>

openMay 2024View details →
zenodo24/100

Deep Supervised and Convolutional Generative Stochastic Network for Protein Secondary Structure Prediction, 2014

<p>This contains the protein sequence and secondary structure dataset from&nbsp;<a href="https://proceedings.mlr.press/v32/zhou14.html"><strong>Deep Supervised and Convolutional Generative Stochastic Network for Protein Secondary Structure Prediction</strong></a><strong>, ICML, 2014</strong></p> <p>This dataset was originally hosted at&nbsp;http://www.princeton.edu/~jzthree/datasets/ICML2014/. Since the original URL is no longer available and the dataset is still used by many, I moved the dataset here.</p>

opencc-by-4.0Jan 2014View details →
ClinicalTrials.gov24/100

Cross-Cultural Differences in the Network Structure of Social Anxiety and Body Dysmorphic Symptoms

ClinicalTrials.gov study NCT06962917. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

Disturbed Structural Connectivity of Frontostriatal and Frontoparietal Networks in Adults With ADHD

ClinicalTrials.gov study NCT02232464. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

7T Anatomo-functional Characterization of Structures in the Action Observation Network

ClinicalTrials.gov study NCT06826287. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

Structural and Functional Networks in ALS: An Insight Into Pseudobulbar Affect

ClinicalTrials.gov study NCT06396260. IPD Sharing: NO. Countries: 1. Publications: 0.

closedIPD-NOFeb 2026View details →
ClinicalTrials.gov24/100

Structural Network on Prostate Cancer in the French Greater West Region

ClinicalTrials.gov study NCT03214315. IPD Sharing: NO. Countries: 2. Publications: 0.

closedIPD-NOFeb 2026View details →
ClinicalTrials.gov24/100

The Brain Structure and Neural Network Changing the Before and After Ventriculo-peritoneal Shunting in the Normal Pressure Hydrocephalus Patients

ClinicalTrials.gov study NCT03092804. IPD Sharing: NO. Countries: 1. Publications: 0.

closedIPD-NOFeb 2026View details →
ClinicalTrials.gov24/100

Structural Heart and Valve Network PROSPECTIVE Registry

ClinicalTrials.gov study NCT03928639. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
dryad24/100

Data from: Identification of any structure-specific hepatotoxic potential of different pyrrolizidine alkaloids using Random Forest and artificial Neural Network

Open the record for dataset details and reuse information.

publicSep 2017View details →
geo24/100

Co-methylation Networks Associated with Cognition and Structural Brain Development During Adolescence

GEO Series GSE284550. Homo sapiens. 163 samples. Type: Methylation profiling by genome tiling array.

openGEO-OpenDec 2024View details →
geo24/100

Structure primed embedding on the transcription factor manifold enables transparent model architectures for gene regulatory network and latent activity inference

GEO Series GSE218089. Saccharomyces cerevisiae. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2023View details →
geo20/100

Kidney tertiary lymphoid structures in Lupus Nephritis develop into large interconnected networks and resembles lymph nodes in gene signature.

GEO Series GSE155405. Mus musculus. 29 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2020View details →
geo20/100

Structure and Function of a Transcriptional Network Activated by Hog1

GEO Series GSE12270. Saccharomyces cerevisiae. 85 samples. Type: Expression profiling by array.

openGEO-OpenJul 2008View details →
zenodo20/100

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

<p>Dataset for NPClassifier project</p>

opencc-by-4.0Aug 2020View details →
geo20/100

The structure of gene networks that constrain and promote diversification in Heliconius melpomene

GEO Series GSE64051. Heliconius melpomene malleti; Heliconius melpomene plesseni. 96 samples. Type: Expression profiling by array; Expression profiling by genome tiling array.

openGEO-OpenMar 2015View details →
geo16/100

The Drosophila transcriptional network is structured by microbiota

GEO Series GSE87818. Drosophila melanogaster. 36 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2016View details →
geo16/100

Genome-wide structure changes during neuronal differentiation drive gene regulatory networks

GEO Series GSE156671. Homo sapiens. 95 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenAug 2020View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record