Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
5,805
datasets available to search
ShareScore release 0.9.0
Dataset results
5,805 results for “Data model”
Data from: Estimating phenology and phenological shifts with hierarchical modeling
<p class="MsoNormal">This dataset contains daily counts of juvenile chum salmon (<em>Oncorhynchus keta</em>) from the Skagit River, WA between 1990–2019. The analyzed dataset contains 30 years and 4,636 monitoring days in which 2,358,284 migrating chum salmon were counted. This dataset is the companion dataset for phenomix R package.</p>
Research data related to the article "Paleo-Hydrogeological Modeling to Understand Present-Day Groundwater Salinities in a Low-Lying Coastal Groundwater System (Northwestern Germany)"
<p><strong>Research Data related to the publication "Paleo-Hydrogeological Modeling to Understand Present-Day Groundwater Salinities in a Low-Lying Coastal Groundwater System (Northwestern Germany)" by Seibert et al. (2023) published in <em>Water Resources Research</em> </strong></p> <p>Dear reader,</p> <p>research data are provided for the article "Paleo-Hydrogeological Modeling to Understand Present-Day Groundwater Salinities in a Low-Lying Coastal Groundwater System (Northwestern Germany)" by Seibert et al. (2023). The authors hope that the research data allows for a better understanding of the paleo-modeling workflow. Feedback on the model files or questions regarding the modeling approach etc. can be addressed to the authors of the article, see contact details below. The research data comprises the following files:</p> <ul> <li>files related to the parameter estimation procedure using PEST (Doherty, 2021a,b) (see subfolder "<em>parameter_estimation</em>")</li> <li>iMOD-Python (Visser and Bootsma, 2019) scripts to create the iMOD-WQ (Verkaik et al., 2021) input files for each model variant. Note that model variants consist of several time slice models, indicated by the corresponding file names, e.g., '<em>Model_BC_slice_01.py'</em> etc. (see '<em>scripts.zip</em>' in the subfolders 'Model BC', 'Model CP', 'Model NE-ND-NP', 'Model NE-NP', 'Model NG', 'Model NP', 'Model R1', 'Model R2', 'Model R3', 'Model R4', 'Model R5', 'Model R6', 'Model SS')</li> <li>simulation output files, including concentration and head data for each model stress period (3-D), mean/max. concentration and head data for each model stress period (2-D), as well as depth [mbgs] of different salinity interfaces (2-D), i.e., marking the transitions from fresher to more saline groundwater using thresholds of 0.45 ('<em>depth_interface_mbgs</em>'), 1, 5, 10 and 20 g TDS L<sup>-1</sup>, respectively (see subfolders '<em>output/npy_arrays'</em> within each model variant subfolder). Moreover, sea levels, time slice names and stress period numbers are provided in the '<em>output/npy_arrays'</em> subfolders as well as final concentrations and heads (3-D) for each time slice model of each model variant (e.g., '<em>Model_BC_slice_01_final_concentrations.npz</em>' and '<em>Model_BC_slice_01_final_heads.npz</em>'; see '<em>output.zip'</em> in the model variant subfolders)</li> <li>iMOD-Python (Visser and Bootsma, 2019) input files, such as digital elevation models, geologic models etc. (see subfolder '<em>imod_input'</em>). However, in most cases no consent for re-distribution of these data sets exists, and they cannot be made freely available through this publication. Please, consult the corresponding meta-data files or get in touch with one of the authors for further information</li> <li>bash scripts for the execution of iMOD-Python .py- and iMOD-WQ .run-files in a linux environment (see subfolder '<em>bash_scripts'</em>)</li> <li>figure files as well as the corresponding .py and .m scripts and shape-files, where applicable (see subfolder '<em>figures'</em>); note that consent for re-distribution for some figure input files doesn't exist, compare corresponding meta-data files</li> <li>videos presenting the concentration evolution of the different model variants (vertically averaged concentrations & cross-sectonal view, see subfolder '<em>videos'</em>)</li> </ul> <p>Meta-data files are usually provided with data files in the different subfolders for clarification.</p> <p>iMOD-WQ (Verkaik et al., 2021) input data and .run-files were executed on the University Oldenburg High-Performance Cluster 'Carl', running simulations in parallel with 32 computational cores.</p> <p>Further information on the iMOD suite can be found here: https://deltares.github.io/iMOD-Documentation/</p> <p>Literature:</p> <p>Doherty, J. E., (2021a). PEST Model-Independent Parameter Estimation User Manual Part I: PEST, SENSAN and Global Optimisers. Watermark Numerical Computing. p.394.</p> <p>Doherty, J. E. (2021b). PEST Model-Independent Parameter Estimation User Manual Part II: PEST Utility Support Software. Watermark Numerical Computing. p.274.</p> <p>Verkaik, J., Hughes, J. D., van Walsum, P. E. V., Oude Essink, G. H. P., Lin, H. X., & Bierkens, M. F. P. (2021). Distributed memory parallel groundwater modeling for the Netherlands Hydrological Instrument. Environmental Modelling & Software, 143, p.105092.</p> <p>Visser, M., & Bootsma, H. (2019). iMOD-Python: Work with iMOD MODFLOW models in Python. Retrieved from https://imod.xyz/</p> <p><strong>If you have further questions, please, contact one of the following authors</strong>: Stephan L. Seibert (stephan.seibert@uol.de), Janek Greskowiak (janek.greskowiak@uol.de) or Gudrun Massmann (gudrun.massmann@uol.de)</p>
Data set for "Spatially explicit ecological modeling improves empirical characterization of dispersal"
<p>Data set used and created in the simulations, analysis and figures of the associated paper.</p>
Data from: Integrated species distribution models fitted in INLA are sensitive to mesh parameterisation
<p class="MsoNormal">The ever-growing popularity of citizen science, as well as recent technological and digital developments, have allowed the collection of data on species' distributions at an extraordinary rate. In order to take advantage of these data, information of varying quantity and quality needs to be integrated. Point process models have been proposed as an elegant way to achieve this for estimates of species distributions. These models can be fitted efficiently using Bayesian methods based on integrated nested Laplace approximations (INLA) with stochastic partial differential equations (SPDE). This approach uses an efficient way to model spatial autocorrelation using a Gaussian random field and a triangular mesh over the spatial domain. The mesh is constructed by user-defined variables, so effectively represents a free parameter in the model. However, there is a lack of understanding about how to set these mesh parameters, and their effect on model performance. Here, we assess how mesh parameters affect predictions and model fit to estimate the distribution of the serotine bat, <em><span>Eptesicus serotinus</span></em><span>,<em> </em>in Great Britain. A Bayesian INLA model was fitted using five meshes of varying densities to a dataset comprising both structured observations from a national monitoring programme and opportunistic records. We demonstrate that mesh density impacted spatial predictions with a general loss of accuracy with increasing mesh coarseness</span>. However, we also show that the finest mesh was unable to overcome spatial biases in the data. In addition, the magnitude of the covariate effects differed markedly between meshes. This confirms that mesh parameterisation is an important and delicate process with implications for model inference. We discuss how species distribution modellers might adapt their use of INLA in light of these findings.</p>
Complementary sequence and model data for fungal E3BP
<p>Multiple Sequance Alignments (MSA) and atomic models of E3BP predicted using AlphaFold (AF), as supplementary datasets to the publication "The structure and evolutionary diversity of the fungal E3-binding protein" (2023)</p>
Accurate Modeling of Bromide and Iodide Hydration with Data-Driven Many-Body Potentials
<p>Ion–water interactions play a central role in determining the properties of aqueous systems in a wide range of environments. However, a quantitative understanding of how the hydration properties of ions evolve from small aqueous clusters to bulk solutions and interfaces remains elusive. Here, we introduce the second generation of data-driven many-body energy (MB-nrg) potential energy functions (PEFs) representing bromide–water and iodide–water interactions. The MB-nrg PEFs use permutationally invariant polynomials to reproduce two-body and three-body energies calculated at the coupled cluster level of theory, and implicitly represent all higher-body energies using classical many-body polarization. A systematic analysis of the hydration structure of small Br<sup>–</sup>(H<sub>2</sub>O)<sub><em>n</em></sub> and I<sup>–</sup>(H<sub>2</sub>O)<sub><em>n</em></sub> clusters demonstrates that the MB-nrg PEFs predict interaction energies in quantitative agreement with “gold standard” coupled cluster reference values. Importantly, when used in molecular dynamics simulations carried out in the isothermal–isobaric ensemble for single bromide and iodide ions in liquid water, the MB-nrg PEFs predict extended X-ray absorption fine structure (EXAFS) spectra that accurately reproduce the experimental spectra, which thus allows for characterizing the hydration structure of the two ions with a high level of confidence.</p>
Estimating Modal Mineralogy using Raman Spectroscopy: Multivariate Analysis Models and Raman Cross-Section Proxies - Chapter 4 Data
<p>I provide supplementary data for Chapter 4 of my dissertation including electron microprobe analysis data as well as the Raman spectra and associated metadata of the mineral end-members, the mineral-mineral mixtures, and the diamond-mineral mixtures.</p>
Data source and projections of maintenance energy gaps for "Caloric reductions needed to achieve obesity goals by 2030 and 2040: A modeling study"
<p><strong>Variables in "data_ENSANUT_waves.xlsx"</strong></p> <table> <thead> <tr> <th scope="col">Name</th> <th scope="col">Variable</th> </tr> </thead> <tbody> <tr> <td><em>id</em></td> <td>Identifier for each individual in the data.</td> </tr> <tr> <td><em>est_var</em></td> <td>Strata for the estimation of variances, accounting for survey design.</td> </tr> <tr> <td><em>svy_weights</em></td> <td>Complex survey weight.</td> </tr> <tr> <td>code_upm</td> <td>Identifier of the primary sampling unit.</td> </tr> <tr> <td>sex</td> <td>Sex of the individual (``male'' or ``female'').</td> </tr> <tr> <td>age</td> <td>Age (yrs).</td> </tr> <tr> <td>body_weight</td> <td>Measured body weight (kg).</td> </tr> <tr> <td>height</td> <td>Measured height (cm).</td> </tr> <tr> <td>bmi</td> <td>Body mass index, estimated before the simulation process (kg/m<sup>2</sup>).</td> </tr> <tr> <td>SES</td> <td>Socioeconomic level, divided in tertiles. This variable was constructed using Principal Components Analysis.</td> </tr> <tr> <td>year</td> <td>Indicator for each ENSANUT wave (2000, 2006, 2012, 2016, 2018).</td> </tr> <tr> <td>svy_weights_raking_2030</td> <td>Complex survey weight, constructed for the baseline sample (ENSANUT 2018) to replicate the expected age and sex distribution in 10-year age groups for 2030.</td> </tr> <tr> <td>svy_weights_raking_2040</td> <td>Complex survey weight, constructed for the baseline sample (ENSANUT 2018) to replicate the expected age and sex distribution in 10-year age groups for 2040.</td> </tr> <tr> <td>body_weight_final_2030_Nordpred</td> <td>Simulated body weight by 2030 based on MEGs projections of the Nordpred-based fit (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>body_weight_final_2040_Nordpred</td> <td>Simulated body weight by 2040 based on MEGs projections of the Nordpred-based fit (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2030_Nordpred</td> <td>Simulated body mass index by 2030 based on MEGs projections of the Nordpred-based fit (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2040_Nordpred</td> <td>Simulated body mass index by 2040 based on MEGs projections of the Nordpred-based fit (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2030_Nordpred</td> <td>Indicator of obesity by 2030, based on MEGs projections of the Nordpred-based fit (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2040_Nordpred</td> <td>Indicator of obesity by 2040, based on MEGs projections of the Nordpred-based fit (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>body_weight_final_2030_Gompertz</td> <td>Simulated body weight by 2030 based on MEGs projections of the Gompertz model (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>body_weight_final_2040_Gompertz</td> <td>Simulated body weight by 2040 based on MEGs projections of the Gompertz model (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2030_Gompertz</td> <td>Simulated body mass index by 2030 based on MEGs projections of the Gompertz model (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2040_Gompertz</td> <td>Simulated body mass index by 2040 based on MEGs projections of the Gompertz model (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2030_Gompertz</td> <td>Indicator of obesity by 2030, based on MEGs projections of the Gompertz model (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2040_Gompertz</td> <td>Indicator of obesity by 2040, based on MEGs projections of the Gompertz model (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>body_weight_final_2030_linear</td> <td>Simulated body weight by 2030 based on MEGs projections of the linear fit (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>body_weight_final_2040_linear</td> <td>Simulated body weight by 2040 based on MEGs projections of the linear fit (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2030_linear</td> <td>Simulated body mass index by 2030 based on MEGs projections of the linear model (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2040_linear</td> <td>Simulated body mass index by 2040 based on MEGs projections of the linear model (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2030_linear</td> <td>Indicator of obesity by 2030, based on MEGs projections of the linear model (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2040_linear</td> <td>Indicator of obesity by 2040, based on MEGs projections of the linear model (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>body_weight_final_2030_rootSquare</td> <td>Simulated body weight by 2030 based on MEGs projections of the root square fit (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>body_weight_final_2040_rootSquare</td> <td>Simulated body weight by 2040 based on MEGs projections of the root square fit (kg). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2030_rootSquare</td> <td>Simulated body mass index by 2030 based on MEGs projections of the root square fit (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>BMI_final_2040_rootSquare</td> <td>Simulated body mass index by 2040 based on MEGs projections of the root square fit (kg/m<sup>2</sup>). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2030_rootSquare</td> <td>Indicator of obesity by 2030, based on MEGs projections of the root square fit (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> <tr> <td>obes_final_2040_rootSquare</td> <td>Indicator of obesity by 2040, based on MEGs projections of the root square fit (1 = yes, 0 = no). This variable is defined only for the baseline sample (ENSANUT 2018). </td> </tr> </tbody> </table>
Data Archive for "Latent diffusion models for generative precipitation nowcasting with accurate uncertainty quantification"
<p>This repository contains the training data and pretrained models for the paper "Latent diffusion models for generative precipitation nowcasting with accurate uncertainty quantification".</p> <p>To use the data, clone the repository at <a href="https://github.com/MeteoSwiss/ldcast">https://github.com/MeteoSwiss/ldcast</a>. Unzip the files as follows:</p> <ul> <li>Demo files "ldcast-demo-20210622.zip" to the "data" directory</li> <li>Training and evaluation data archive "ldcast-datasets.zip" to the "data" directory</li> <li>Pretrained model archive "models-genforecast.zip" to the "models" directory</li> </ul>
EAMv2 anthropogenic aerosol emissions data in model-native spectral-element grid
<p>Anthropogenic aerosol emissions data from surface and elevated sources in E3SM Model-native grid. Data available for standard uniform resolution in EAMv2 (ne30pg2) and North America Regionally Refined Model (NA RRM). Data were prepared as a part of the improved emission treatment in E3SMv2 (available at: https://doi.org/10.5281/zenodo.7823633).</p>
Data files for Peizhi Mai et al., "Robust charge-density wave correlations in the electron-doped single-band Hubbard model" (2023)
<p>Data files for "Robust charge-density wave correlations in the electron-doped single-band Hubbard model" by P. Mai, N. S. Nichols, S. Karakuzu, F. Bao, A Del Maestro, T. A. Maier, and Steven Johnston</p> <p>Preprint: https://arxiv.org/abs/2210.14930</p>
Data accompanying the article "Arctic sea ice data assimilation combining an ensemble Kalman filter with a novel Lagrangian sea ice model for the winter 2019–2020"
<p>The .zip file contains temporal-spatial averaged metrics for evaluating simulations against observed ice thickness, concentration, volume, and drift. These quantities are presented in the manuscript "Arctic sea ice data assimilation combining an ensemble Kalman filter with a novel Lagrangian sea ice model for the winter 2019–2020"</p> <p>Subfolders are named by the experiment IDs, including metrics obtained from the relevant experimental results and observations.</p> <p>In case information is missing, do not hesitate to contact chengsukun@hotmail.com</p> <p>We thank Pavel Sakov for helpful discussions and improvement regarding the EnKF-C code and Jiping Xie for contributing the TOPAZ interface to sea ice observations. We are grateful for the support from Timothy Williams and Anton Korosov regarding the environments of neXtSIM and its analysis tools. The work is funded by the DASIM-II grant from ONR (grant nos. N00014-18-1-2493 and N00014-18-1-2204). Alberto Carrassi, Christopher K. R. T. Jones, Ali Aydo ̆gdu, and Pierre Rampal acknowledge the support of the project SASIP funded by Schmidt Futures – a philanthropic initiative that seeks to improve societal outcomes through the development of emerging science and technologies. Sukun Cheng and Laurent Bertino were co-funded by the FOCUS project from the Research Council of Norway (grant no. 301450), and Alberto Carrassi and Yumeng Chen are also supported by the UK National Centre for Earth Observation (grant no. NCEO02004). Computations were carried out on the Norwegian Supercomputing InfrastructureSigma2 (grants nn2993k for computing and NS2993K for data storage)</p>
High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors
<p>Data to reproduce figures in submitted manuscript "High-dimensional multivariate autoregressive model estimation of<br> human electrophysiological data using fMRI priors"</p> <p>https://www.biorxiv.org/content/10.1101/2022.11.18.516669v1</p>
SCM data for "Representing the subgrid surface heterogeneity of precipitation in a general circulation model"
<p>Single Column Model output from simulations described in the paper, "Representing the subgrid surface heterogeneity of precipitation in a general circulation model," by Nathan Arnold, Randal Koster, and Atanas Trayanov. </p>
Worldwide benchmark of modelled solar irradiance data annex
<p>This data annex contains the supplementary data to the IEA PVPS Task 16 report "Worldwide benchmark of modeled solar irradiance data" from 2023. The dataset includes visualizations and tables of the results as well as information concerning the reference stations.</p> <p>The dataset contains the following type of files:</p> <ul> <li>StationList.xlsx: list of all stations, including their coordinates, climate zone, station code, continent, altitude AMSL, data source, number of available test data sets, station type (Tier-1 or Tier-2), and available calibration record.</li> <li>Result tables in folder “ResultTables”: Folders “climate_zones” and “continents” contain the tables described in Section 5.3. The filenames are “Component_metric_in_subgroup.html” with “component” DNI or GHI, “metric” describing the metric (see Table 3), and “subgroup” describing the continent or climate zone.</li> <li>World maps: The folder “Resultmaps” contains world maps of the metrics described in Section 5.2. Either four or three metrics, depending on the map, are included in each pdf. A legend describing the meaning of the point size is also included.</li> <li>Scatter plots of test vs. reference irradiance: The folder “Scatterplots” contains two folders, “DNI” and “GHI”, for the two investigated components. Three subfolders are also contained in these two folders: <ul> <li>The subfolders “plotsPerSiteYear” contain plots named “scatOverviewCOMPONENT_SITEYYYY.png”, where “COMPONENT” is either DNI or GHI, SITE is the three-letter site abbreviation, and YYYY is the evaluated year. The png plots include the scatterplots for all test data sets evaluated for the case specified by the filename.</li> <li>The subfolders “plotsPerTestdataProvider” contain plots named “scatOverviewTESTDATASET_COMPONENTYYYY.png”, where “TESTDATASET” describes the test data set, “COMPONENT” is either DNI or GHI, and YYYY is the evaluated year. The png plots include the scatterplots for all sites evaluated for the case specified by the filename.</li> <li>The subfolders “plotsPerTestdataProviderSamePosPerStat” contain the same scatterplots as “plotsPerTestdataProvider”, but using a slightly different visualization method. Here, the position of each scatterplot for a given site within the plot is always the same. Although this yields many empty subplots and small scatterplots, it can be helpful to rapidly browse through the plots if only one or a few stations are of interest.</li> </ul> </li> </ul>
Bayesian spatiotemporal modelling of wildfire occurrences and sizes for projections under climate change (Data)
<p>This repository contains the data necessary to reproduce the study developed in Legrand et al. (2023) "Bayesian spatiotemporal modelling of wildfire occurrences and sizes for projections under climate change"</p>
Golden-cheeked warbler Integrated Population Model (IPM) data in Austin, TX (2011–2019)
<p>These data and code are associated with the publication in Ecosphere entitled "Urban land cover and El Nino events negatively impact population viability of an endangered North American songbird." We performed an integrated population model to evaluate the effect of climate patterns and urban land cover on the viability of an endangered wood-warbler breeding in central Texas. We used territory monitroing data from 2011–2019 to predict viability of the population 25 years into the future.</p>
Flexpart input/output data for "An optimisation method to improve modelling of wet deposition in atmospheric transport models: applied to FLEXPART v10.4"
<p>Flexpart input and output data for the manuscript/paper "An optimisation method to improve modelling of wet deposition in atmospheric transport models: applied to FLEXPART v10.4" by S. Van Leuven, P. De Meutter, J. Camps, P. Termonia and A. Delcloo.</p>
Supporting information for the RNAct Data Science Wizard (DSW) knowledge model for early-stage researchers.
<p>The two attached Excel sheets contain information about the datasets collected by the Early Stage Researchers (ESRs) in the RNAct MSCA-ITN project (RNAct_datasets.xlsx) and on the questionnaire that was put to the ESRs in relation to the Data Science Wizard (DSW) knowledge model that was developed as part of RNAct. </p> <p>The zip file contains data in relation to the Data Science Wizard template development:</p> <p>- DMP_1stRound_introductory_presentation.pdf: Presentation for the ESRs to prepare them for filling in the first version of the DMP</p> <p>- DMPs_1stRound, DMPs_2ndRound: The filled in DMPs by the ESRs in the first and second round</p> <p>- RNAct-ESRtraining-KM_1.0.3.km: The first version of the knowledge model to create the DMP</p> <p>- RNAct-ESRtraining-KM_1.0.14.km: The second and final version of the knowledge model to create the DMP</p> <p>- TemplateDMP_RNAct-ESRtraining-KM_1.0.14.pdf: A PDF overview of the second and final version of the knowledge model</p>
The 2021 Maduo earthquake data and model
<p>The processed radar data, the broadband recordings data, and the fault geometry and slip models</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.