Find research datasets worth reusing

FIGURE 4 in A new species of Victoriopisa bantenensis (Crustacea: Amphipoda: Eriopisidae) from West Java, Indonesia

FIGURE 4. Victoriopisa bantenensis sp. nov. holotype male habitus 5.09 mm, MZB.Cru.Amp 006, soft-bottom sediment, Banten Bay, West Java, Java Sea, scales: 0.2 mm

FIGURE 5 in A new species of Victoriopisa bantenensis (Crustacea: Amphipoda: Eriopisidae) from West Java, Indonesia

FIGURE 5. Distributions of Victoriopisa species (Modified after Zhao et al., 2016) (1, Victoriopisa multiartus Zhao et al. 2016; 2, V. atlantica Stock & Platvoet, 1981; 3, V. australiensis (Chilton, 1923); 4, V. chilkensis (Chilton, 1921); 5, V. epistomata (Griffiths, 1974); 6, V. marina Lowry & Springthorpe, 2005; 7, V. papiae Asari, 1983; 8, V. ryukyuensis Morino, 1991; 9, V. tinggiensis Lim et al., 2010; 10, V. wadai Ariyama, 2015; 11, V. bruneiensis Hossain & Hughes, 2016; 12, V. bantenensis sp. nov.)

FIGURE 3 in A new species of Victoriopisa bantenensis (Crustacea: Amphipoda: Eriopisidae) from West Java, Indonesia

FIGURE 3. Victoriopisa bantenensis sp. nov. holotype male habitus 5.09 mm, MZB.Cru.Amp 006, soft-bottom sediment, Banten Bay, West Java, Java Sea, scales: P3, P4, P6 0.5 mm; P5 0.2 mm

FIGURE 2 in A new species of Victoriopisa bantenensis (Crustacea: Amphipoda: Eriopisidae) from West Java, Indonesia

FIGURE 2. Victoriopisa bantenensis sp. nov. holotype male habitus 5.09 mm, MZB.Cru.Amp 006, soft-bottom sediment, Banten Bay, West Java, Java Sea, scales: Habitus, A1, A2 0.5 mm; G1, G2 0.2 mm

Figs 37-39. Male genitalia. 37 in On the Scaphidiinae (Coleoptera: Staphylinidae) of Java, Indonesia

Figs 37-39. Male genitalia. 37 – Xotidium reductum sp. nov.; aedeagus in dorsal view, scale = 0.1 mm. 38 – Ditto, internal sac, part extending beyond tip of parameres, in dorsal view, scale = 0.1 mm. 39 – Ditto, paramere in ventral view, scale = 0.05 mm.

Figs 14-20. Male genitalia. 14, 15 in On the Scaphidiinae (Coleoptera: Staphylinidae) of Java, Indonesia

Figs 14-20. Male genitalia. 14, 15 – Scaphisoma neglectoides sp. nov., aedeagus in dorsal and lateral views, scale = 0.1 mm. 16, 17 – Scaphisoma planatoides sp. nov., aedeagus in dorsal and lateral views, scale = 0.2 mm. 18-20 – Scaphisoma posticum sp. nov. 18 – Aedeagus in dorsal view, scale = 0.1 mm. 19 – Ditto, paramere in ventral view, scale = 0.05 mm. 20 – Ditto, internal ac in dorsal view, scale = 0.05 mm.

Figs 1-7. Male genitalia. 1, 2 in On the Scaphidiinae (Coleoptera: Staphylinidae) of Java, Indonesia

Figs 1-7. Male genitalia. 1, 2 – Baeotoxidium inexspectatum sp. nov., aedeagus in dorsal and lateral views, scale = 0.05 mm. 3-6 – Scaphicoma pattens sp. nov. 3, 4 – Aedeagus in dorsal and lateral views, scale = 0.1 mm. 5 – Ditto, internal sac in dorsal view, scale = 0.05 mm. 6 – Ditto, paramere in ventral view, scale = 0.05 mm. – 7 Scaphicoma ophthalmica (Achard), aedeagus in dorsal view, scale = 0.2 mm.

Figs 8-13. Male genitalia. 8 in On the Scaphidiinae (Coleoptera: Staphylinidae) of Java, Indonesia

Figs 8-13. Male genitalia. 8 – Scaphisoma bryanti sp. nov., aedeagus in dorsal view, scale = 0.2 mm. 9 – Ditto, in ventral view, without proximal part of basal bulb, scale = 0.1 mm. 10, 11 – Scaphisoma drescheri sp. nov., aedeagus in dorsal and lateral views, scale = 0.1 mm. 12, 13 – Scaphisoma multispinosum sp. nov., aedeagus in dorsal and lateral views, scale = 0.1 mm.

Figs 21-27. Male genitalia and antenna. 21 in On the Scaphidiinae (Coleoptera: Staphylinidae) of Java, Indonesia

Figs 21-27. Male genitalia and antenna. 21 – Scaphobaeocera basalis sp. nov., aedeagus in lateral view, scale = 0.1 mm. 22 – Ditto, internal sac, scale 0.1 mm. 23, 24 – Scaphobaeocera larga sp. nov., aedeagus in dorsal and lateral views, scale = 0.1 mm. 25 – Scaphobaeocera montisgedei sp. nov., antennomeres III to XI, scale = 0.1 mm. 26, 27 – Ditto, aedeagus in dorsal and lateral views, scale = 0.1 mm

Figs 28-36. Male genitalia. 28, 29 in On the Scaphidiinae (Coleoptera: Staphylinidae) of Java, Indonesia

Figs 28-36. Male genitalia. 28, 29 – Scaphobaeocera spinigeroides sp. nov, aedeagus in dorsal and lateral views, scale = 0.1 mm. 30 – Scaphobaeocera truncata sp. nov., aedeagus in lateral view. 31-33 – Scaphoxium corporaali sp. nov. 31 - Aedeagus in dorsal view, scale = 0.1 mm. 32 – Ditto, internal sac, scale = 0.1 mm. 33 Ditto, paramere in ventral view, scale = 0.1 mm. 34-36 – Scaphoxium dentatum sp. nov. 34 - Aedeagus in dorsal view, scale = 0.1 mm. 35 – Ditto, internal sac, scale = 0.05 mm. 36 – Ditto, paramere in ventral view, scale = 0.1 mm.

opencc-zeroFeb 2020View details →

Supplementary material 7 from: Cumming RT, Bank S, Le Tirant S, Bradler S (2020) Notes on the leaf insects of the genus Phyllium of Sumatra and Java, Indonesia, including the description of two new species with purple coxae (Phasmatodea, Phylliidae). ZooKeys 913: 89-126. https://doi.org/10.3897/zookeys.913.49044

File S3. Deposition of paratype material for Phyllium (Phyllium) gardabagusi sp. nov. and Phyllium (Phyllium) nisus sp. nov.

opencc-zeroFeb 2020View details →

Supplementary material 1 from: Cumming RT, Bank S, Le Tirant S, Bradler S (2020) Notes on the leaf insects of the genus Phyllium of Sumatra and Java, Indonesia, including the description of two new species with purple coxae (Phasmatodea, Phylliidae). ZooKeys 913: 89-126. https://doi.org/10.3897/zookeys.913.49044

Table S1. GenBank accession numbers for 55 sequences from Phyllium specimens, including sex, type designation, specimen collection code, and collection data

restrictedcc-by-4.0Dec 2023View details →

SelfCode 2.0: Annotated Corpus of Student Self-Explanations to Introductory JAVA Programs in Computer Science

Dataset Description: This dataset was collected during a lab study conducted in Spring 2022 for introductory JAVA programming. Students had to provide line by explanations to four JAVA programs in the experimental condition of the study. The JAVA Programs were selected from the examples made available in the <a title="PCEX" href="https://dl.acm.org/doi/abs/10.1145/3279720.3279726" target="_blank" rel="noopener">PCEX Worked Examples interface</a>. The explanations collected were then split by the number of attempts. Students could attempt twice based on the feedback provided using the the PCEX interface and in their third attempt they filled in the blanks to complete an explanation to the particular line of code. In this dataset, we only have the annotated examples of explanations provided by students. The explanations were annotated on their correctness (binary rating 0 or 1), completeness (binary rating 0 or 1) and similarity (rating scale 1 to 5). Correctness: Given the line of code and context of the line in the program, if the student explanation covers **only** the topics relevant to the line of code Completeness: Given the line of code and context of the line in the program, if the student explanation covers **all** the topics relevant to the line of code Similarity: Given the line of code, the context of the line in the program and an expert explanation to the line of code, the metric compares the similarity on a rating scale from 1 to 5, defined in the following manner: 1 - expert and student explanations are very different, 2 -- expert and student explanations are somewhat alike, but there are major differences in the concepts / topics explained 3 -- expert and student explanations are similar but there are differences in the concepts / topics explained 4 -- expert and student explanations are similar and have few differences in the concepts / topics explained 5 -- expert and student explanations are very similar.   Overall 3000 single attempts (corresponding to 40 student explanation submission) were annotated against different various expert explanation pairs.   Dataset Summary: Explanation Type N Definition Experts 2 Source Code Line-by-Line Explanations by Experts Students 60 (annotated 40) Source Code Line-by-Line Explanations by Students <table> <tbody> <tr> <td>COUNT of std_sent_count</td> <td> </td> <td> </td> <td> </td> <td> </td> <td> </td> <td> </td> <td> </td> </tr> <tr> <td>std_sent_count</td> <td>1</td> <td>2</td> <td>3</td> <td>4</td> <td>5</td> <td>6</td> <td>Grand Total</td> </tr> <tr> <td>1</td> <td>1854</td> <td>367</td> <td>245</td> <td>107</td> <td>34</td> <td>33</td> <td>2640</td> </tr> <tr> <td>2</td> <td>222</td> <td>46</td> <td>40</td> <td>12</td> <td>6</td> <td>6</td> <td>332</td> </tr> <tr> <td>3</td> <td>21</td> <td>5</td> <td>5</td> <td>5</td> <td>1</td> <td>2</td> <td>39</td> </tr> <tr> <td>4</td> <td>2</td> <td>1</td> <td>2</td> <td>3</td> <td> </td> <td> </td> <td>8</td> </tr> <tr> <td>Grand Total</td> <td>2099</td> <td>419</td> <td>292</td> <td>127</td> <td>41</td> <td>41</td> <td>3019</td> </tr> </tbody> </table>   Sample Data: Program: PointTester; Line number: 12; Line code: private int y; Expert1: Every object of the Point class will have its own y-coordinate. Therefore, we need to declare an instance variable for the class to store the y-coordinate of the point. We declare it as int because we want to have integer coordinates for the point. Note that an instance variable is a variable defined in a class, for which each instantiated object of the class has a separate copy, or instance. Expert2: The instance variables are declared as private to prevent direct access to them from outside the class. In this way, no unexpected modifications to a Point object’s data are possible. Student1: initialize a private value inside the point class with no value yet Student2: Declares the private int variable y. Student3: Creates a private int that can only be accessed by class Point called int y ... Student59: private variable used to store the value entered into the value of the y coordinate   Kappa Scores: <div> <table> <tbody> <tr> <td> Round </td> <td> Row Numbers </td> <td> Correctness Rating Agreement %age </td> <td> Correctness Rating Kappa </td> <td> Sufficiency Rating Agreement %age </td> <td> Sufficiency Rating Kappa </td> </tr> <tr> <td> 1 </td> <td> 1000 - 1432  </td> <td> 92.9 </td> <td> 0.365 </td> <td> 0.708 </td> <td> -0.0123 </td> </tr> <tr> <td> 2 </td> <td> 1432 - 1864 </td> <td> 94.2 </td> <td> 0.263 </td> <td> 77.6 </td> <td> 0.329 </td> </tr> <tr> <td> 3 </td> <td> 1864 – 1964  </td> <td> 75.3 </td> <td> 0 </td> <td> 70.3 </td> <td> 0.299 </td> </tr> <tr> <td> 4 </td> <td> 1964 -- 2064  </td> <td> 86 </td> <td> 0.108 </td> <td> 74.7 </td> <td> 0.275 </td> </tr> <tr> <td> 5 </td> <td> 2064 – 2264 </td> <td> 95.5 </td> <td> -0.0158 </td> <td> 81.5 </td> <td> 0.312 </td> </tr> <tr> <td> 6 </td> <td> 2264 – 2464 </td> <td> 83.5 </td> <td> 0.039 </td> <td> 86.5 </td> <td> 0.648 </td> </tr> <tr> <td> 7 </td> <td> 2464 – 2864 </td> <td> 92 </td> <td> 0.103 </td> <td> 74.5 </td> <td> 0.188 </td> </tr> <tr> <td> 8 </td> <td> 2864 -- 3005 </td> <td> 86.5 </td> <td> -0.026 </td> <td> 72.3 </td> <td> 0.117 </td> </tr> </tbody> </table> </div>     Citation Format: If using this dataset in your project please cite: Lekshmi-Narayanan, A.-B., Chapagain, J., Brusilovsky, P., & Rus, V. (2023). SelfCode 2.0: Annotated Corpus of Student Self-Explanations to Introductory JAVA Programs in Computer Science [Data set]. Zenodo. https://doi.org/10.5281/zenodo.10912669 Acknowledgements: This project was funded as a part of the NSF AWARD # 1822752

opencc-by-4.0Apr 2024View details →

Dataset of relocation-resisant Java class signatures

The file contains two SQL dumps containing all the relevant and necessary information. The signatures table depends on the libraries table for metadata. The two are used in conjunction for matching input class files to already known JAR files from the database.

opengpl-3.0-or-laterDec 2024View details →

DataTD: A Dataset of Java Projects Including Test Doubles

This dataset contains 1,070 open-source Java projects that include test doubles. The projects were mined from GitHub. The dataset was built by selecting all projects whose primary language is Java and that had at least five stars as of October 29, 2023. This list of projects is available in <code>java_repositories_with_five_stars.txt</code>. The 1,070 projects in this dataset use Maven as their build system, contain JUnit tests, and utilize Mockito to create test doubles. The projects are available in the <code>project.zip</code> archive file. Additionally, the dataset includes metadata about the projects, stored in the <code>projects.json</code> file. This metadata describes the characteristics of each project, along with test double definitions, stubbings, and verifications. Finally, we also provide the source code used to build DataTD, enabling future research on expanding and utilizing the dataset.

opencc-by-4.0May 2023View details →

Serializing Java Objects in Plain Code

This is the anonymized replication package for "Serializing Java Objects in Plain Code". The zip file contains the following directory structure: <pre><code>. ├── BroadleafCommerce ├── BroadleafDemoSite ├── generated-tests ├── gephi ├── graphhopper ├── pdfbox └── prodj</code></pre> The tool exists under "prodj", the generated tests can be found in "generated-tests" and the other projects are in their respective directories and are configured to run with prodj. You can run prodj from the "prodj/rockstofetch" directory by executing `java -jar target/rocks-to-fetch.jar --help`. Our configurations can be found in "prodj/rockstofetch/src/test/resources".

Subspecies and Distribution. C. a. alpinus Pallas, 1811 — C Russia and W China southward through India to Bhutan and Bangladesh. C. a. hesperius Afanas'ev & Zolotarev, 1935 — E Russia, China, and SE Asia. C. a. sumatrensis Hardwicke, 1821 — Sumatra and Java. in Canidae

Subspecies and Distribution. C. a. alpinus Pallas, 1811 — C Russia and W China southward through India to Bhutan and Bangladesh. C. a. hesperius Afanas'ev & Zolotarev, 1935 — E Russia, China, and SE Asia. C. a. sumatrensis Hardwicke, 1821 — Sumatra and Java.

Subspecies and Distribution. M. j. javanensis Desmarest, 1820 — Java, Sumatra. M. j. lucifer Thomas, 1902 — Borneo. M. j. ollula Thomas, 1902 — Bunguran I, Natuna I. in Mephitidae

Subspecies and Distribution. M. j. javanensis Desmarest, 1820 — Java, Sumatra. M. j. lucifer Thomas, 1902 — Borneo. M. j. ollula Thomas, 1902 — Bunguran I, Natuna I.

Distribution. Pakistan, India, Sri Lanka, and Nepal to China, Mainland SE Asia, Peninsular Malaysia, Sumatra, Java, Borneo, the Philippines, and many ssa small islands. Also scattered records in Sulawesi, Moluccan Is, Timor, and the Aru Is, probably resulting from introductions. Presence uncertain in Papua New Guinea. Introduced to Japan in the late 1800s. in Viverridae

Distribution. Pakistan, India, Sri Lanka, and Nepal to China, Mainland SE Asia, Peninsular Malaysia, Sumatra, Java, Borneo, the Philippines, and many ssa small islands. Also scattered records in Sulawesi, Moluccan Is, Timor, and the Aru Is, probably resulting from introductions. Presence uncertain in Papua New Guinea. Introduced to Japan in the late 1800s.

Subspecies and Distribution. P. l. larvata C. E. H. Smith, 1827 — China (and Taiwan & Hainan Is), Cambodia, Laos, Myanmar, and Vietnam. P. l. annectens Robinson & Kloss, 1917 — Peninsular Malaysia and Thailand. P. l. grayi Bennett, 1835 — Bhutan, India, Nepal, and Pakistan. P. l. leucocephala Gray 1865 — Borneo. P. l. leucomystax Gray, 1837 — Sumatra. P. l. tytlerii Tytler, 1864 — Andaman Is. A possible sighting in western Java in 1993; however, there are no other records for this island. Introduced to Japan. in Viverridae

Subspecies and Distribution. P. l. larvata C. E. H. Smith, 1827 — China (and Taiwan & Hainan Is), Cambodia, Laos, Myanmar, and Vietnam. P. l. annectens Robinson & Kloss, 1917 — Peninsular Malaysia and Thailand. P. l. grayi Bennett, 1835 — Bhutan, India, Nepal, and Pakistan. P. l. leucocephala Gray 1865 — Borneo. P. l. leucomystax Gray, 1837 — Sumatra. P. l. tytlerii Tytler, 1864 — Andaman Is. A possible sighting in western Java in 1993; however, there are no other records for this island. Introduced to Japan.