Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
360
datasets available to search
ShareScore release 0.7.1
Dataset results
360 results for “Microbes”
Gut Microbe-Targeted Choline Trimethylamine Lyase Inhibitors Improves Obesity Via Rewiring of Host Circadian Rhythms.
GEO Series GSE157925. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
A Cell Atlas of Microbe-Responsive Processes in the Zebrafish Intestine
GEO Series GSE161855. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Environmental functional genes for soil microbes in South East Queensland, Australia
GEO Series GSE23422. synthetic construct; uncultured microorganism. 12 samples. Type: Expression profiling by array.
Microbe-induced inflammatory cytokines in Il10-/- colon tissue
GEO Series GSE39085. Mus musculus. 32 samples. Type: Expression profiling by RT-PCR.
Dietary heme modulates microbiota and mucosa of mouse colon without significant host-microbe cross talk
GEO Series GSE34253. Mus musculus. 2 samples. Type: Expression profiling by array.
Impact of modeled microgravity stress on innate immunity in a beneficial animal-microbe symbiosis
GEO Series GSE247559. Euprymna scolopes. 96 samples. Type: Expression profiling by array.
Microbes associate with host innate immune response in idiopathic pulmonary fibrosis
GEO Series GSE85268. Homo sapiens. 68 samples. Type: Expression profiling by array.
Microbe-enhanced high light stress tolerance of Arabidopsis thaliana photosynthesis is coordinated through Iron-dependent redox metabolism
GEO Series GSE251796. Arabidopsis thaliana. 31 samples. Type: Expression profiling by high throughput sequencing.
Neonatal microbes shape islet-immune interactions that determine life-long host metabolic capacity [scRNA-seq and bulk RNA-seq].
GEO Series GSE243754. Mus musculus. 59 samples. Type: Expression profiling by high throughput sequencing.
Host-microbe interactions and changes during intestinal epithelial cell death-dependent dysbiosis
GEO Series GSE244920. Escherichia coli. 24 samples. Type: Expression profiling by high throughput sequencing.
Commensal microbe-derived butyrate epigenetically induces colonic regulatory T cells
GEO Series GSE49655. Mus musculus. 6 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
Host-microbe interactions following L. plantarum administration in SIV-infected and uninfected rhesus macaques
GEO Series GSE139271. Macaca mulatta. 12 samples. Type: Expression profiling by array.
A microfluidics-based in vitro model of the gastrointestinal human-microbe interface
GEO Series GSE79383. synthetic construct; Homo sapiens. 18 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
Medicago SPX1 and SPX3 recruit nitrogen-fixing microbes to promote growth through controlling flavonoid biosynthesis
GEO Series GSE289310. Medicago truncatula. 6 samples. Type: Expression profiling by high throughput sequencing.
Spatial coupling of microbes and immune cells in solid malignancies
GEO Series GSE155725. Mus musculus; Homo sapiens. 57 samples. Type: Expression profiling by high throughput sequencing.
Microbially competent 3D skin - a novel test system for studying host-microbe interaction
GEO Series GSE129864. Homo sapiens. 9 samples. Type: Expression profiling by array.
Raw data - Gut Microbes
Open the record for dataset details and reuse information.
Gut microbe-generated phenylacetylglutamine is an endogenous allosteric modulator of β2-adrenergic receptors
Open the record for dataset details and reuse information.
Microbe-host Interaction Relationship in Patients With Stroke-relatedPneumonia
ClinicalTrials.gov study NCT06161298. IPD Sharing: NO. Countries: 0. Publications: 0.
High-resolution view at the coding transcriptome and noncoding RNAs of major gut microbe Bacteroides thetaiotaomicron
GEO Series GSE144492. Bacteroides thetaiotaomicron. 24 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.