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Figure 18 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 18. Photos of live specimens of Havelockia versicolor (Semper, 1867) (estimated 35– 40 mm long live). a, dorsal view (WAM Z89047); b, ventral view (WAM Z89047); in situ view (WAM Z89043); d, lateral view (WAM Z89048).
Figure 25 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 25. Photos of lateral views of live specimens of three species of Actinocucumis Ludwig, 1875: a, Actinocucumis longipedes H. L. Clark, 1938 (WAM Z89061); b, Actinocucumis solanderi O'Loughlin, 2014 (in O'Loughlin, Mackenzie & VandenSpiegel, 2014) (WAM Z89063); c, Actinocucumis typica Ludwig, 1875 (WAM Z89065; estimated 25 mm long live).
Figure 17. a in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 17. a, photo of dorsal view of live specimen of Phyllophorus (Urodemella) holothuroides Ludwig, 1875 (WAM Z89035). b, photo of lateral view of live specimen of Phyllophorella spiculata (Chang, 1835) (WAM Z89033).
Figure 15 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 15. Photos of live specimen of Pseudocolochirus axiologus (H. L. Clark, 1914) (WAM Z89032): a, lateral view; b, peri-oral view; c, perianal view.
Figure 14 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 14. Ossicles from holotype of Plesiocolochirus minaeus O'Loughlin sp. nov. (WAM Z89026): a, dorsal body wall deep bowls with spinous rims about 55 µm wide 48 µm deep (bottom left and bottom center), shallow bowls variably bridged to create irregular hollow ellipsoids up to 144 µm long (top row), knobbed button with secondary layering up to 176 µm long (bottom right); b, tentacle fine rod and thick perforated rod up to 440 µm long, rosettes up to 50 µm long; c, ventral tube foot endplate up to at least 280 µm long (right), support perforated rod-plates up to 200 µm long, small shallow knobbed bowls variably bridged to create irregular hollow ellipsoids up to 55 µm long, large shallow bowl not bridged up to 128 µm long (top left).
Figure 12 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 12. Ossicles from specimen of Plesiocolochirus spinosus (Quoy & Gaimard, 1834) (NMV F204081): a, multi-layered scale ossicle from body wall, up to 1.5 mm long; b, body wall thick buttons, up to 120 µm long, and fine knobbed bowls with (top center) and without (bottom left) a bridge, up to 70 µm long; c, body wall bridged ellipsoid-like bowl (right), up to 70 µm long, and thick button (left).
Figure 13. a, b in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 13. a, b, photos of live specimen of holotype of Plesiocolochirus minaeus O'Loughlin sp. nov. (WAM Z89026): a, dorsal view; b, ventral view. c–e, photos of preserved holotype: c, lateral view; d, oral view; e, anal view.
Figure 27 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 27. Photos of live specimens. a, Molpadia scabrum (Sluiter, 1901) (WAM Z89069; estimated 38 mm long live); b, Protankyra insolens (Théel, 1886) (WAM Z89070; estimated 24 mm long live); c, Protankyra verrilli (Théel, 1886) (WAM Z89072).
Figure 8 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 8. Photos of live specimens of Colochirus quadrangularis Troschel, 1846 from northern Australia: a, dorsal view (WAM Z89021, from Camden Sound); b, ventral view (WAM Z89015, from Camden Sound); c, colour morphs from Joseph Bonaparte Gulf (NMV F201791).
Figure 9 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 9. Ossicles from specimens of Colochirus quadrangularis Troschel, 1846 from Singapore: a, dorsal and peri-anal body wall bowls up to 56 µm long (three with single bridge) (top row), bowls with one spinous margin up to 80 µm long (three with single bridge) (middle row), hollow ellipsoids up to 88 µm long, and ellipsoids with inner bridges up to 88 µm long (bottom row) (from Singapore specimen NMV F210388); b, tentacle rods and rod-plates up to 440 µm long, rosettes up to 96 µm long (from NMV F210388); c, ventral tube foot endplate up to 400 µm diameter (right), support rod-plates up to 272 µm long, small bowls, spinous-edge bowl with bridging, and ellipsoid with internal bridging (bottom left) (from NMV F210389).
Figure 7 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 7. Photos of live specimens of Colochirus quadrangularis Troschel, 1846 from Singapore waters, provided by Helen Pei San Wong and Joo Yong Ong (TMSI of NUS; specimens estimated to be up to 60 mm long): a, dorsal view showing anal scales and absence of warts; b, ventral view; c, dorsal view showing warts; d, lateral view.
Figure 3 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 3. Preserved holotype of Holothuria (Metriatyla) keesingi O'Loughlin sp. nov. (WAM Z89006): a, dorsal view; b, ventral view; c, tentacles with surrounding ring of papillae; d, calcareous ring with radial plate right, inter-radial plate left.
Figure 1 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 1. Maximum likelihood tree of Colochirus–Plesiocolochirus COI data, with mid-point rooting. Bootstrap support (100 replicates) indicated by circles (100%) and rectangles (>95%).
Figure 5 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 5. Photos of live specimen belonging to a Stichopus unresolved species complex (WAM Z89009; estimated 110 mm long live): a, dorsal view; b, ventral view; c, in situ view.
Figure 2. a, b in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 2. a, b, photos of live holotype specimen of Holothuria (Metriatyla) keesingi O'Loughlin sp. nov. (WAM Z89006): a, dorso view; b, latero-ventral view with ventrum and tube feet along upper side, dorsal papilla underneath. c, photo of dorsal view of live specimen of Holothuria (Thymiosycia) gracilis Semper, 1868 (WAM Z89008; estimated 125 mm long live).
Figure 4 in The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea)
Figure 4. Ossicles from holotype (WAM Z89006; rods and small button mid-top and bottom) and paratype (WAM Z89005; tables, buttons) specimens of Holothuria (Metriatyla) keesingi O'Loughlin sp. nov. (in specimens table discs up to 240 µm across; table spires up to 176 µm long; buttons up to 200 µm long; rods up to 336 µm long).
Dataset: Assessing Power in Punching Sounds from Mainstream Films and Video Games
<p>Dataset accompanying the article published at ICAD 2023: </p> <p>Assessing Power in Punching Sounds from Mainstream Films and Video Games</p> <p>This repository contains: </p> <ul> <li>28 sound stimuli (.wav)</li> <li>Dataset from the experiment as described in the paper (.RData)</li> <li>Dataset containing audio features as described in the paper (.RData)</li> <li>Analysis code in R (.pdf)</li> </ul> <p> </p>
Dataset of sound field simulations above finite absorbers
<p>The authors' documentation on the training, validation, and testing datasets in their paper "<em>Sound absorption estimation of finite porous samples with deep residual learning</em>."</p> <p>The sound fields are generated with a simplified boundary element method (BEM) of a baffled porous layer on a rigid backing using the Delany–Bazley–Miki model. Further information on the contents of this database can be found in <em>documentation.pdf</em>.</p> <p>More details on the models and reproduction of results of the paper using this database can be found in the GitHub repo: <a href="https://github.com/eliaszea/finite-absorber-ML">https://github.com/eliaszea/finite-absorber-ML</a>. </p>
CLDF dataset derived from Hruschka et al.'s "Detecting regular sound changes in linguistics as events of concerted evolution" from 2015
<p>Cite the source of the dataset as:</p> <blockquote> <p>Hruschka, D. J., Branford, S., Smith, E. D., Wilkins, J., Meade, A., Pagel, M., & Bhattacharya, T. (2015). Detecting regular sound changes in linguistics as events of concerted evolution. Current Biology, 25(1), 1-9.</p> </blockquote>
Underwater ambient sound in tropical cyclones
<p>Underwater ambient sound measurements were made in three tropical cyclones: Hurricane Gustav (2008) in the Gulf of Mexico, and Typhoons Fanapi (September 2010) and Megi (October 2010) in the western Pacific Ocean as part of the ITOP (Impact of Typhoons on the Ocean in the Pacific) program. Measurements were made from eight Lagrangian floats, each equipped with one hydrophone, air deployed ahead of these storms by WC-130J aircraft operated by the U.S. Air Force Reserve 53rd Weather Reconnaissance squadron Hurricane Hunters. Floats 50 and 51 were in Gustav, 60, 61 and 62 in Fanapi, and 66, 67 and 68 in Megi. After the storm passage, the Lagrangian floats were recovered by a research vessel. Float positions were determined by interpolating between a few GPS positions taken during the storm passage guided by time-integrated velocity measurements from Electromagnetic Autonomous Profiling Explorer (EM-APEX) floats deployed at the same time.</p> <p>During the passage of tropical cyclones, the hydrophone switched between the work and sleep modes every 30 minutes due to limited data storage. In the work mode, the hydrophones sampled underwater ambient sound twice per second. The sound measurements thus are in 30-min segments. There are 39 (50), 38 (51), 60 (60), 56 (61), 56 (62), 55 (66), 53 (67) and 51 (68) segments (float serial numbers are in brackets), respectively, giving a total of 408 data segments and about 190 hours of sound measurements. Each raw time series has been Fourier transformed to obtain a power spectrum from 40 Hz to 50 kHz, with a spectral resolution of 40 Hz. The sound pressure level (SPL) in decibels (dB) is defined as <span class="math-tex">\(\textrm{SPL} = 20\cdot \textrm{log}(\textrm{P}/\textrm{P}_\textrm{ref}),\)</span> where <span class="math-tex">\(\textrm{P}\)</span> is the hydrophone measured sound pressure, and <span class="math-tex">\(\textrm{P}_\textrm{ref}\)</span> is the reference pressure 1 <span class="math-tex">\(\mu \textrm{Pa}^{2} \textrm{Hz}^{-2}\)</span>. The hydrophones were inter-calibrated in laboratory before and after the deployments, and agreed with a root-mean-square difference of 1–2 dB. The raw sound measurements are labeled SpdbP_raw.</p> <p>Each Lagrangian float carried a variety of instruments including a pumped CTD (conductivity, temperature and depth) sensor, a pumped GTD (gas tension device), a motor to control drogue, and another motor to control the float's buoyancy. These instruments generated noise of different temporal and spectral features. Sound measurements contaminated by noise were removed as described in <em>Zhao et al. (2014 JPO)</em>. One exception is GTD, which ran for 90% of the time for floats 50 and 51 (Gustav) and 66, 67, and 68 (Megi), and caused significant contamination on the < 5-kHz sound data. However, the > 5-kHz sound measurements are not affected by the GTD noise, and thus kept for future studies (detect rain events and breaking waves). The cleaned sound measurements are labeled SpdbP_clean.</p> <p>We decomposed the underwater ambient sound into three components according to their time scales. First, we calculate background sound, defined as the mean of the lowest 10% sound level over the 30 min period. The background sound generally rises and falls with increasing/decreasing wind speed and the presence of bubble clouds. Second, sound fluctuation is obtained by removing the background sound from the original data. Third, the sound fluctuation is divided into two components using two matched temporal filters. The second-scale fluctuation is obtained by high-pass filtering the sound fluctuation using 20-second running mean. The minute-scale fluctuation is obtained by low-pass filtering the sound fluctuation. By this method, the original underwater ambient sound is decomposed into three components: background (SpdbP_background), minute-scale fluctuation (SpdbP_MidFreq), and second-scale fluctuation (SpdbP_HighFreq). We applied the above decomposition method to all 408 30-min sound segments from eight Lagrangian floats, and created 408 figures with the same format. We share here the raw, de-noised, and decomposed sound data for all eight Lagrangian floats (eight Matlab data files) and demonstrate their decomposed sound data (eight PDF files). <a href="/api/files/d9886aea-3829-43d2-b10e-d57bdd77ae7a/Fig-5-Q101623.pdf?versionId=fee16fdd-adef-4419-98f7-3f05188065dd">Fig-5-Q101623.pdf </a> and <a href="/api/files/d9886aea-3829-43d2-b10e-d57bdd77ae7a/Fig-6-J091801.pdf?versionId=1607d29d-cb3c-4cbb-bb58-12c09b3a788c">Fig-6-J091801.pdf </a>are Figures 5 and 6 in a recent paper (<a href="https://journals.ametsoc.org/view/journals/atot/aop/JTECH-D-22-0078.1/JTECH-D-22-0078.1.xml">https://journals.ametsoc.org/view/journals/atot/aop/JTECH-D-22-0078.1/JTECH-D-22-0078.1.xml</a>). </p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.