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391 results for “Spatial analysis”

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geo20/100

Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis

GEO Series GSE103239. Homo sapiens. 465 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2018View details →
geo20/100

Spatial transcriptomic analysis reveals increased adipogenesis and non-alcoholic fatty liver disease pathway in pig-to-NHP islet transplantation recipient liver during early post-transplantation perio

GEO Series GSE261581. Macaca mulatta. 18 samples. Type: Other.

openGEO-OpenMay 2025View details →
geo20/100

Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.

GEO Series GSE210380. Mus musculus. 4 samples. Type: Other.

openGEO-OpenSep 2022View details →
geo20/100

Spatial transcriptome analysis unveils an innate immune activation signature of acute T cell-mediated rejection in kidney transplants

GEO Series GSE252137. Homo sapiens. 12 samples. Type: Other.

openGEO-OpenFeb 2024View details →
geo20/100

Spatial transcriptomic analysis of the Arabidopsis thaliana - Botrytis cinerea interaction

GEO Series GSE24444. Arabidopsis thaliana. 6 samples. Type: Expression profiling by array.

openGEO-OpenMar 2011View details →
geo20/100

Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)

GEO Series GSE209583. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenDec 2023View details →
geo20/100

Spatial transcriptomics analysis of a panel of PDX models of GBM

GEO Series GSE268312. Homo sapiens/Mus musculus xenograft; Homo sapiens; Mus musculus. 30 samples. Type: Other.

openGEO-OpenJun 2025View details →
geo20/100

Spatial transcriptomic analysis of 53 pre-treatment biopsies from LARC patients using GeoMx technology

GEO Series GSE279942. Homo sapiens. 97 samples. Type: Other.

openGEO-OpenSep 2025View details →
geo20/100

Visium Spatial transcriptomics analysis of human primary colorectal cancer

GEO Series GSE226997. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo20/100

Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24

GEO Series GSE213306. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenSep 2023View details →
geo20/100

Discovering Molecular Signatures in ATMR: Single-cell RNA Sequencing Analysis of Human Blood and Tissue Spatial Transcriptomics [Spatial Transcriptomics]

GEO Series GSE248787. Homo sapiens. 24 samples. Type: Other.

openGEO-OpenDec 2023View details →
geo20/100

Discovering Molecular Signatures in ATMR: Single-cell RNA Sequencing Analysis of Human Blood and Tissue Spatial Transcriptomics [scRNA-seq]

GEO Series GSE248788. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2023View details →
geo20/100

Clinical Characteristics and Spatial transcriptome analysis of Early Resistance to Alectinib in ALK-Positive non-small cell lung cancer: A Retrospective OLCSG Study

GEO Series GSE309894. Homo sapiens. 34 samples. Type: Other.

openGEO-OpenJan 2026View details →
geo20/100

Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation

GEO Series GSE227742. Mus musculus. 4 samples. Type: Other.

openGEO-OpenJul 2024View details →
geo20/100

Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis

GEO Series GSE214349. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo20/100

Spatial Transcriptomic Analysis of Superficial Peritoneal Endometriotic Lesions

GEO Series GSE263897. Homo sapiens. 60 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenApr 2024View details →
geo20/100

Discovering Molecular Signatures in ATMR: Single-cell RNA Sequencing Analysis of Human Blood and Tissue Spatial Transcriptomics

GEO Series GSE248789. Homo sapiens. 33 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenDec 2023View details →
geo20/100

Spatial RNA sequencing analysis confirm ACTC1+ myofibers support a transplanted SMPC pool

GEO Series GSE243875. Homo sapiens. 122 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo20/100

Spatial analysis reveals distinct immune phenotypes and tertiary lymphoid structure-like aggregates in pediatric acute myeloid leukemia [Nanostring PanCancer IO 360]

GEO Series GSE228481. Homo sapiens. 23 samples. Type: Other.

openGEO-OpenAug 2024View details →
geo20/100

Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence

GEO Series GSE238264. Homo sapiens. 7 samples. Type: Other.

openGEO-OpenApr 2024View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record