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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Granuloma annulare exhibits mixed immune and macrophage polarization profiles with spatial transcriptomics
GEO Series GSE263571. Homo sapiens. 12 samples. Type: Other; Expression profiling by high throughput sequencing.
Heterozygous GAA knockout is nonconsequential on metabolism and the spatial liver transcriptome in high-fat diet induced obese and prediabetic mice
GEO Series GSE284331. Mus musculus. 96 samples. Type: Other.
Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]
GEO Series GSE259405. Mus musculus. 12 samples. Type: Other.
Spatially resolved transcriptomics of high-grade serous ovarian carcinoma
GEO Series GSE189843. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics]
GEO Series GSE279181. Homo sapiens. 18 samples. Type: Other.
Spatial Transcriptomics and Network-Based Bioinformatics Differentiate Intestinal Phenotypes of Cardiac and Classical Necrotizing Enterocolitis
GEO Series GSE268423. Homo sapiens. 56 samples. Type: Other.
Spatial Transcriptomics of Brains Infected with VEEV
GEO Series GSE275201. Mus musculus. 2 samples. Type: Other.
Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process
GEO Series GSE297119. Mus musculus. 3 samples. Type: Other.
Heat-Shock Pathway Activation by TRC-051384 Protects Spiral Ganglion Neurons from Noise-Induced Hearing Loss [Spatial Transcriptomics]
GEO Series GSE312646. Mus musculus. 51 samples. Type: Other.
Comparative spatial transcriptomic and single-cell analyses of human nail units and hair follicles demonstrate transcriptional similarities between the onychodermis and follicular dermal papilla
GEO Series GSE193269. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics]
GEO Series GSE245469. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas
GEO Series GSE232766. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A
GEO Series GSE229175. Ciona intestinalis. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptomics reveal topological immune landscapes of Asian head and neck angiosarcoma
GEO Series GSE227469. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptome analysis reveals Notch pathway-associated prognostic markers in IDH1 wild-type glioblastoma involving the subventricular zone
GEO Series GSE83537. Homo sapiens. 36 samples. Type: Expression profiling by array.
Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia
GEO Series GSE293896. Homo sapiens. 10 samples. Type: Other.
Mesenchymal-like tumor cells and myofibroblastic cancer-associated fibroblasts are associated with progression and immunotherapy response of clear-cell renal cell carcinoma [spatial transcriptomics]
GEO Series GSE210041. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics (Visium, Spatial 3' V1, 10x Genomics) analysis of heart tissues in a murine model of Kawasaki disease vasculitis
GEO Series GSE178799. Mus musculus. 2 samples. Type: Other.
EPAS1 directs a network of genes implicated in mitochondrial dysfunction in arrhythmogenic cardiomyopathy [Spatial Transcriptomics]
GEO Series GSE213540. Homo sapiens. 1 samples. Type: Other.
Tracing the molecular route to progression in miRNA biogenesis-defective thyroid lesions [Spatial_transcriptomics]
GEO Series GSE301163. Homo sapiens. 78 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.