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699
datasets available to search
ShareScore release 0.9.0
Dataset results
699 results for “biofilm.”
Identification of an ECF sigma factor that facilitates electroactive biofilm formation by Shewanella oneidensis MR-1
GEO Series GSE142643. Shewanella oneidensis; Shewanella oneidensis MR-1. 16 samples. Type: Expression profiling by array.
Granulocytic myeloid-derived suppressor cell activity during biofilm infection is regulated by a glycolysis-HIF-1α axis (scRNA-Seq)
GEO Series GSE241950. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional portrait of M. bovis BCG during in vitro biofilm production shows genes differentially expressed during intercellular aggregation and substrate attachment.
GEO Series GSE150030. Mycobacterium tuberculosis variant bovis BCG. 6 samples. Type: Expression profiling by high throughput sequencing.
Granulocytic myeloid-derived suppressor cell activity during biofilm infection is regulated by a glycolysis-HIF-1α axis II
GEO Series GSE241739. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of biofilm formation in persistent and transient Listeria monocytogenes from the retail deli environment
GEO Series GSE176617. Listeria monocytogenes; Listeria innocua. 30 samples. Type: Expression profiling by high throughput sequencing.
Meta-transcriptomic analysis of the response of river biofilms to pharmaceutical products using anonymous DNA microarray
GEO Series GSE20501. environmental samples; environmental samples; environmental samples. 30 samples. Type: Expression profiling by array.
ChIP-seq of biofilm master regulators in four species of Candida
GEO Series GSE161133. Candida dubliniensis; Candida albicans; Candida parapsilosis; Candida tropicalis. 61 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Pseudo-resistant Bacillus cereus uses biofilm-related mechanism to mimic vancomycin resistance during agar diffusion susceptibility testing
GEO Series GSE253142. Bacillus cereus. 4 samples. Type: Expression profiling by high throughput sequencing.
An Improved Bacterial Single-cell RNA-seq Reveals Biofilm Heterogeneity
GEO Series GSE260458. Staphylococcus aureus; Caulobacter vibrioides NA1000; Escherichia coli str. K-12 substr. MG1655. 20 samples. Type: Expression profiling by high throughput sequencing.
Haemophilus parasuis F9 transcriptome in biofilm and planktonic cultures using RNA sequencing
GEO Series GSE56428. Glaesserella parasuis. 3 samples. Type: Expression profiling by high throughput sequencing.
Ribosome Profiling Reveals Differences in Global Translational vs. Transcriptional Gene Expression Changes During Early Candida albicans Biofilm Formation
GEO Series GSE274931. Candida albicans. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
Extracellular succinate induces spatially organized biofilm formation in Clostridioides difficile
GEO Series GSE223108. Clostridioides difficile. 16 samples. Type: Expression profiling by high throughput sequencing.
Digestive exophagy of bacterial biofilms by parasitic intestinal amoeba and its impact on stress tolerance, antibiotic resistance and cytotoxicity
GEO Series GSE233645. Entamoeba histolytica. 9 samples. Type: Expression profiling by high throughput sequencing.
Unveiling co-infection in cystic fibrosis airways: Transcriptomic analysis of Pseudomonas aeruginosa and Staphylococcus aureus dual-species biofilms
GEO Series GSE195909. Pseudomonas aeruginosa; Staphylococcus aureus. 6 samples. Type: Expression profiling by high throughput sequencing.
PrbP modulates biofilm formation in Liberibacter crescens
GEO Series GSE182163. Liberibacter crescens BT-1. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of Clostridium acetobutylicum biofilm cells in repeated-batch fermentation
GEO Series GSE72765. Clostridium acetobutylicum DSM 1731; Clostridium acetobutylicum; Arthrobacter sp.. 8 samples. Type: Expression profiling by array.
Identification of an ECF sigma factor that facilitates electroactive biofilm formation by Shewanella oneidensis MR-1: Experiment 2
GEO Series GSE142642. Shewanella oneidensis; Shewanella oneidensis MR-1. 8 samples. Type: Expression profiling by array.
Suppression of biofilm formation by Candida albicans and multispecies by nepodin of Rumex root via hyphal inhibition
GEO Series GSE119822. Candida albicans. 2 samples. Type: Expression profiling by high throughput sequencing.
Elucidating granulocytic myeloid-derived suppressor cell (G-MDSC) fate during S. aureus biofilm infection
GEO Series GSE248640. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
LubriShieldTM - a permanent urinary catheter coating that prevents uropathogen biofilm formation in vitro independent of host protein conditioning
GEO Series GSE299077. Pseudomonas aeruginosa PAO1. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.