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507 results for “symbionts”
Data from: Geographically widespread honeybee-gut symbiont subgroups show locally distinct antibiotic-resistant patterns
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Expanding the mutualistic niche: parallel symbiont turnover along climatic gradients
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Data from: European phylogeography of the epiphytic lichen fungus Lobaria pulmonaria and its green algal symbiont
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Data from: Recovery from bleaching is mediated by threshold densities of background thermo-tolerant symbiont types in a reef-building coral
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Data from: Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome
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Data from: Symbiont community and host genetic structure of the brain coral Platygyra verweyi, at the outlet of a nuclear power plant and adjacent areas
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Data from: Hosts do not simply outsource pathogen resistance to protective symbionts
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Data from: Heritability of symbiont density reveals distinct regulatory mechanisms in a tripartite symbiosis
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Supplementary material 1 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: occurrence
Figure 7 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 7 Bayesian continuous-space phylogeographic analyses for Dasyscyphella longistipitata, and Fagus crenata grouped in three consecutive times. Red dots represent D. longistipitata localities, and blue areas are polygons for the nodes of dispersion for F. crenata.
Figure 6 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 6 Areas of conserved environmental suitability for Dasyscyphella longistipitata, where red is high (overlapping of four layers), yellow medium (at least three overlapping layers), and gray low (two overlapping layers) suitability.
Figure 4 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 4 Haplotype network based on the concatenated sequences of ITS and beta-tubulin of Dasyscyphella longistipitata. The size of the circles represents the haplotype frequency; white dots represent mutational steps between haplotypes (note that the branches lengths do not correspond to genetic distances). Colors represent the locality of origin arranged as a latitudinal gradient where red represents the further north site.
Figure 1 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 1 Geographical distribution of the sampling localities for Dasyscyphella longistipitata associated with cupules of Fagus crenata in Japan. Red dots and numbers correspond to D. longistipitata; whereas blue dots represent F. crenata study sites from Fujii et al. (2002). For sites nomenclature see Table 1.
Figure 3 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 3 Multivariate analyses of the genetic diversity inferred from ITS and beta-tubulin concatenated sequences of Dasyscyphella longistipitataA Principal Component Analysis (PCA) of genetic diversity at the individual level B principal Correspondence Analysis (PCoA) of genetic diversity using the localities as grouping factor. Colors represent the locality of origin arranged as a latitudinal gradient where red represents the further north site.
Supplementary material 5 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: (measurement/occurrence/multimedia/etc.)
Figure 5 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 5 Bayesian Skyride Plot for ADasyscyphella longistipitata using the concatenated ITS and beta-tubulin, and BFagus crenata, using the reported sequences in Fujii et al. (2002). The y-axis represents the scaled effective population size (log10(Ne*u)), and the x-axis represents time as substitutions per site. Shaded area shows the 95% HPD of the posterior distribution. Solid lines show the median value of effective population size. Dotted shades show the upper and lower 95% highest posterior density. Note that the x-axis in A and B are non-equivalent to each other.
Supplementary material 3 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: statistical data
Supplementary material 2 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: statistical data
Figure 2 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 2 Paired PhiST values for Dasyscyphella longistipitata in the 14 studied localities. White asterisks indicate significance at p ≤ 0.05.
Supplementary material 4 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: (measurement/occurrence/multimedia/etc.)
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.