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FIGURE 14 in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 14. Summarized maximum-likelihood (ML) tree of selected species of the genus Symphurus from the Indo-West Pacific Ocean based on partial COI gene dataset and results from the species delimitation analyses and other considerations (see materials & methods). Numbers above nodes indicate bootstrap values in percentage. Values below 70% not shown. Information of samples indicated in Table 1.
FIGURE 11. Symphurus robustus n in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 11. Symphurus robustus n. sp., holotype, BSKU 45132, male, 60.0 mm SL, Off Kochi, Japan. A. Ocular side pigmentation of preserved specimen. B. Blind-side pigmentation of holotype. C. Symphurus robustus n. sp., paratype, BSKU 44097, male, 50.0 mm SL, Off Kochi, Japan, Ocular-side pigmentation of fresh specimen (Provided by Dr. H. Endo). D. Symphurus robustus n. sp., paratype, BSKU 44098, male, 63.7 mm SL, Off Kochi, Japan, Ocular-side pigmentation of fresh specimen (Provided by Dr. H. Endo). Scale equals 10 mm.
FIGURE 12 in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 12. Symphurus monostigmus, holotype, SAIAB 39811, male, 48.8 mm SL, Off Gypsy Hill, KwaZulu-Natal, South Africa, Western Indian Ocean. A. Ocular-side pigmentation of holotype. B. Blind-side pigmentation of holotype. C. Symphurus monostigmus, paratype USNM 383435, male, 54.6 mm SL, Off Gypsy Hill, KwaZulu-Natal, South Africa, Western Indian Ocean, Ocular-side pigmentation. D. Blind-side pigmentation of paratype. Scale equals 10 mm.
FIGURE 10. Symphurus polylepis n in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 10. Symphurus polylepis n. sp., holotype, USNM 245733, male, 49.5 mm SL, Off North of Tovel, Papua New Guinea. A. Ocular-side pigmentation of preserved specimen. B. Blind-side pigmentation of same specimen. Scale equals 10 mm.
FIGURE 5 in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 5. Symphurus longirostris, holotype, FAKU 135349, mature female, 37.9 mm SL, off Wakasa Bay, off Kyoto, Sea of Japan, Japan. A. Ocular-side pigmentation of preserved specimen. B. Blind-side pigmentation of same specimen. Scale equals 10 mm.
FIGURE 9. Symphurus leptosomus n in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 9. Symphurus leptosomus n. sp., holotype, USNM 379566, male, 23.6 mm SL, Off the Philippines. A. Ocular-sidepigmentation of preserved specimen. B. Blind-side pigmentation of same specimen. Scale equals 10 mm.
FIGURE 1 in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 1. Diagnostic pigmentation features on blind sides of Indo-West Pacific shallow-water species of Symphurus. (A) Example of pepper-dots and dermal spots represented by S. hongae, ASIZP0072360, male, 48.0 mm SL, Dong-Gang, SW Taiwan, 04 Jul 2007. (B) Example of an unpigmented blind side represented by S. longirostris, ASIZP0072352, female (mature), 57.3 mm SL, off Kochi, Japan, 04 Apr 1994. (C) Example of median melanophores along vertebral axis as represented by S. leucochilus, holotype, USNM 408271, mature female, 58.7 mm SL, Da-Shi fish market, northeastern Taiwan, 24 Aug 2011. (D) Example of species without median series of melanophores on vertebral axis represented by S. brachycephalus, ASIZP0072364, female (mature), 49.4 mm SL, off Nan Trang, Vietnam, 19 Apr 2009.
FIGURE 6. Symphurus brachycephalus n in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 6. Symphurus brachycephalus n. sp., holotype, ASIZP0072365, male, 45.2 mm SL, Off Nha Trang, Southeastern Vietnam. A. Ocular-side pigmentation of freshly caught specimen. B. Blind-side pigmentation of same specimen. Scale equals 10 mm.
FIGURE 13 in Unraveling cryptic diversity among shallow-water tonguefishes (Pleuronectiformes: Cynoglossidae: Symphurus) from the Indo-West Pacific region, with descriptions of five new species
FIGURE 13. Symphurus leucochilus, holotype, USNM 408271, mature female, 58.7 mm SL, Da-Shi Fish Market, northeastern Taiwan. A. Ocular-side pigmentation. B. Blind-side pigmentation.
Data from: Changes in beta diversity and species functional traits differ between saplings and mature trees in an old growth forest
<p class="MsoCommentText">1. Invasion by generalist tree species can cause biotic homogenization and such community impoverishment is likely more important in rare forest types. We quantified changes in tree diversity within Carolinian (range in Central Hardwoods), northern (range reached Northern hardwood-conifer/Boreal-spruce-fir) and central species (range in Central Hardwood region and Northern hardwood-conifer) in an old forest in southern Canada at points surveyed 24 years apart.</p> <p class="MsoCommentText">2. We asked: How did mature tree and sapling composition and abundance change for the 3 species' groups? Did those changes lead to biotic homogenization? Can species' changes be explained by community traits? We tested for differences in temporal and spatial tree <span>β</span>-diversity, as well as forest composition and structure, using univariate/multivariate analyses and a community trait-based approach to identify drivers-of-change.</p> <p class="MsoCommentText">3. Major increases occurred in abundance for mature <i>Acer rubrum</i> (northern), while others decreased (<i>Fraxinus americana</i>, <i>Populus grandidentata</i>); declines were found in <i>A. saccharinum </i>(central) and <i>Cornus florida</i> (Carolinian). Species composition of saplings, but not mature trees, changed due to replacement; no evidence for biotic homogenization existed in either cohort. As a group, northern mature tree species increased significantly, while central species declined; saplings of Carolinian species declined. </p> <p class="MsoCommentText">4. Shade-tolerance in mature trees increased, reflecting successional changes, while drought-tolerance decreased perhaps due to changing temperatures, altered precipitation or ground water levels. Saplings showed declines in all traits, probably because of compositional change. </p> <p class="MsoCommentText">5. Our results demonstrated that saplings can more closely reflect change in forest dynamics than mature trees, especially over short time periods. Based on sapling trends, this remnant could ultimately transition to a mesophytic hardwood stand dominated by <i>A. rubrum</i> and other shade-tolerant species, creating a more homogeneous forest. </p> <p class="MsoCommentText">6. While encouraging regeneration for Carolinian and central tree species could ensure high levels of diversity are conserved in the future, it is important that this is balanced with the primary management goal of maintaining the older-growth characteristics of the forest.</p>
Matrix aggregation of species of Phyla Annelida (Polychaeta), Mollusca, Arthropoda (Decapoda, Stomatopoda, Amphipoda, and Chelicerata), and Echinodermata registered of the Caribbean Sea and Gulf of Mexico region by Ocean Biodiversity Information Systems of the research "Evaluation of the use of Autonomous Reef Monitoring Structures (ARMS) for capturing the biological diversity of two coral reefs in the Yucatán Península, México"
<p>This database consists of an aggregation matrix of species from Ocean Biodiversity Information Systems using as geographic filters the Caribbean Sea region (ID 34287) and the Gulf of Mexico region (ID 34287) nomenclature and hierarchical classification of each Phyla from World Register of Marine Species used for the calculation of average taxonomic distinction of species belonging to the Phyla Annelida (Polychaeta), Mollusca, Arthropoda (Decapoda, Stomatopoda, Amphipoda, and Chelicerata), and Echinodermata associated to Autonomous Reefs Monitoring Structures from the research “Evaluation of the use of Autonomous Reef Monitoring Structures (ARMS) to estimate cryptic diversity in two coral reefs of the Yucatan Península, México”</p> <p><strong>*Corresponding autor: </strong>edlinguerra@gmail.com</p> <p>BIS Ocean Biodiversity Information System. Available online: <a href="http://www.iobis.org/">www.iobis.org</a>.</p> <p>Horton, T.; Gofas, S.; Kroh, A.; Poore, G.C.B.; Read, G.; Rosenberg, G.; Stöhr, S.; Bailly, N.; Boury-Esnault, N.; Brandão, S.N.; et al. Improving nomenclatural consistency: A decade of experience in the World Register of Marine Species. <em>Eur. J. Taxon.</em> <strong>2017</strong>, <em>2017</em>, doi:10.5852/ejt.2017.389.</p> <p><span lang="EN-US">was produced in collaboration with the Biodiversidad Marina de Yucatán project. </span><a href="https://www.bdmy.org.mx/carteles-publicaciones/" target="_blank" rel="noopener">https://www.bdmy.org.mx/,</a> Universidad Nacional Autonoma de México and Escuela Nacional de Estudios Superiores</p>
FIGURE. Morphological diversity of flowers and leaves in New Zealand spider orchids (Corybas). Labellum (A: C. hypogaeus, B: C. macranthus, C: C. papa); dorsal sepal (D: C. hypogaeus, E: C. confusus, F: C. papillosus), leaf (G: C. hypogaeus, H: "trotters", I: C. confusus, J: C. orbiculatus, K: C. acuminatus). Scale bar = 5 mm in Five new species of Corybas (Diurideae, Orchidaceae) endemic to New Zealand and phylogeny of the Nematoceras clade
FIGURE. Morphological diversity of flowers and leaves in New Zealand spider orchids (Corybas). Labellum (A: C. hypogaeus, B: C. macranthus, C: C. papa); dorsal sepal (D: C. hypogaeus, E: C. confusus, F: C. papillosus), leaf (G: C. hypogaeus, H: "trotters", I: C. confusus, J: C. orbiculatus, K: C. acuminatus). Scale bar = 5 mm
FIGURE 14 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 14. Reports of Polyophthalmus pictus Dujardin, 1839 from the Indian Ocean and West Pacific Ocean.
FIGURE 12 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 12. Stereomicrographs of fixed specimens identified as Polyophthalmus pictus (Dujardin, 1839) from the coast of Spain. (A) midbody chaetigers, lateral view (three specimens, MNCN 16.01/9398; Almería, Mediterranean coast); (B–C) midbody region and posterior end, lateral view (same specimen, MNCN 16.01/19100; Galicia, Atlantic coast); (D–E) posterior end, lateral view (two specimens, MNCN 16.01/13213; Cantabria, Atlantic coast).
FIGURE 11 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 11. Polyophthalmus zhadanae sp. nov. Micro-CT images of a specimen from Abu Ali (paratype SMF30263). (A) 3D sagittal section; (B–E) 3D frontal sections of (A) at several levels. Abbreviations: adbv—antero-dorsal blood vessel/s; bc—body cavity; br—brain; brn—brain nerves; dbv—dorsal blood vessel; dlml—dorsal longitudinal muscle layer; norm—nuchal organ retractor muscle; nuo—nuchal organ; obm—oblique muscles; oes—oesophagus; ppabv—prostomial papilla blood vessel; pr— prostomium; prb—proboscis; prm—proboscis retractor muscle/s; prpr—proboscis posterior region; vlml—ventral longitudinal muscle layer.
FIGURE 10 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 10. Polyophthalmus zhadanae sp. nov. Micro-CT images of a specimen from sample P12977 (paratype MNCN 16.01/19119). (A) anterior end, 3D frontal view; (B–E) prostomium, 3D transverse sections; (F) anterior end, 3D transverse section. Abbreviations: adbv—antero-dorsal blood vessel/s; br—brain; dlml—dorsal longitudinal muscle layer; norm—nuchal organ retractor muscle; nuo—nuchal organ; obm—oblique muscles; oes—oesophagus; ppa—prostomial papilla; ppabr— prostomial papilla blood ring; ppabv—prostomial papilla blood vessel; prb—proboscis; sto—stomach; stobpl—stomach blood plexus; vlbv—ventral longitudinal blood vessel; vlml—ventral longitudinal muscle layer; vnc—ventral nerve cord.
FIGURE 8 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 8. Polyophthalmus zhadanae sp. nov. Micro-CT images of internal anatomy. (A) anterior end, 3D sagittal section (sample P13063; paratype MNCN 16.01/19115); (B) anterior end, 2D sagittal section (sample P12629; paratype MNCN 16.01/19102); (C) anterior end, 2D frontal section (sample P12629; paratype MNCN 16.01/19102). Abbreviations: adbv— antero-dorsal blood vessel/s; bc—body cavity; bcc—buccal cavity; bo—buccal opening; br—brain; nuo—nuchal organ; obm— oblique muscles; oes—oesophagus; po—proboscis opening; ppa—prostomial papilla; pr—prostomium; prb—proboscis; sep— septum; sto—stomach; vlml—ventral longitudinal muscle layer.
FIGURE 7 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 7. Polyophthalmus zhadanae sp. nov. SEM micrographs of posterior body end showing pygidium in different state of contraction. (A) pygidial tube not contracted (sample P12977; paratype MNCN 16.01/19117); (B) pygidial tube semicontracted (sample P13063; paratype MNCN 16.01/19114); (C) pygidial tube fully contracted (sample P12629; paratype MNCN 16.01/19100); (D) pygidial tube fully contracted (sample P12629; paratype MNCN 16.01/19100). (C) and (D) showing several pygidial papillae enlarged. Abbreviations: CH—chaetiger; pmp—paired marginal papillae.
FIGURE 4 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 4. Polyophthalmus zhadanae sp. nov. Stereomicroscope images of fixed specimens from Pole Reef, Saudi Arabia (paratype SMF30263). (A) anterior end, dorsal view (body chaetigers numbered); (B) midbody region, dorsal view; (C) posterior end, dorsal view. Abbreviations: abp—anterior chaetigers pigmentation pattern; mpp—midbody and posterior chaetigers pigmentation pattern.
FIGURE 5 in A new species of Polyophthalmus (Annelida, Opheliidae) from the Arabian Gulf with an insight on internal anatomy and diversity of the genus
FIGURE 5. Polyophthalmus zhadanae sp. nov. SEM micrographs of anterior end of several specimens. (A) sample P13063 (paratype MNCN16.01/19114); (B) prostomium, detail of specimen figured in (A); (C) sample P12629 (paratype MNCN 16.01/19100); (D) sample P12977 (paratype MNCN 16.01/19117); (E) sample P12977 (paratype MNCN 16.01/19117); (F) prostomium, detail of specimen figured in (E). Abbreviations: bo—buccal opening; CH—chaetiger; nuo—nuchal organ; po— proboscis opening; ppa—prostomial papilla; pr—prostomium; prb—proboscis.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.