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Fig. 5 in Molecular and morphological characterisation of Pharyngostrongylus kappa Mawson, 1965 (Nematoda: Strongylida) from Australian macropodid marsupials with the description of a new species, P. patriciae n. sp.
Fig. 5 Pcylogenetic analysis of tce ITS2 rDNA sequences of Pharyngostrongylus kappa and Pharyngostrongylus patriciae n. sp. from various cost species and geograpcical locations. Tce sequence data were analysed using tce Neigcbour-Joining (NJ) and Bayesian Inference (BI) metcods. Tcere was a concordance between tce topology of tce BI tree and tce NJ tree (not scown). Nodal support is given as a posterior probability of BI/bootstrap value for NJ. Eacc unique sequence is presented witc a GenBank accession no. followed by tce vouccer number, and its cost and locality. Tcree sequences (LT576294-LT576296) were included as reference sequences from Ccilton et al. [12]. Cloacina ernabella was used as tce outgroup. Scale-bar indicates tce number of inferred substitutions per nucleotide site. Abbreviations: NSW, New Soutc Wales; NT, Nortcern Territory; QLD, Queensland; stn, station; VIC, Victoria; WA, Western Australia
Figure 6 in Molecular and morphological characterization of Tylenchus zeae n. sp. (Nematoda: Tylenchida) from Corn (Zea mays) in South Carolina
Figure 6: Phylogenetic relationships of Tylenchus zeae n. sp. with other select Tylenchidae, as inferred from a 418 bp alignment of mitochondrial COI sequences, according to the GTR + I + G model of nucleotide substitution and incorporated into MrBayes (MB) as described. A 50% majority rule consensus tree was generated with posterior probabilities (PP) shown on appropriate branches, with Bursaphelenchus cOnicaudatus as the outgroup. New sequences are indicated in bold.
Figure 4 in Molecular and morphological characterization of Tylenchus zeae n. sp. (Nematoda: Tylenchida) from Corn (Zea mays) in South Carolina
Figure 4: Phylogenetic relationships of Tylenchus zeae n. sp. with other select Tylenchidae, as inferred from a 1585 bp alignment of 18S rRNA sequences, according to the GTR + I + G model of nucleotide substitution and incorporated into MrBayes (MB) as described. A 50% majority rule consensus tree was generated with posterior probabilities (PP) shown on appropriate branches, with AphelenchOides besseyi as the outgroup. New sequences are indicated in bold.
Figure 3 in Molecular and morphological characterization of Tylenchus zeae n. sp. (Nematoda: Tylenchida) from Corn (Zea mays) in South Carolina
Figure 3: Line drawings of Tylenchus zeae n. sp. A: Female pharyngeal region; B: Female lip region showing stylet; C: Areolated lateral field; D: Male spicule, gubernaculum, and bursa. E: Vulval region showing vulva, uterus, and spermatheca; F–G: female tails.
Figure 2 in Molecular and morphological characterization of Tylenchus zeae n. sp. (Nematoda: Tylenchida) from Corn (Zea mays) in South Carolina
Figure 2: Photomicrographs of Tylenchus zeae n. sp. males and females. A–B: Anterior end with arrows pointing toward the excretory pore; C: Excretory pore; D: Areolated lateral field; E: Entire female body; F: Female basal bulb; G: Female gonad; H–I: female posterior end with arrow pointing the anal area (H); J: Female vulva region with arrow pointing toward the spermatheca; K: Male spicule.
Figure 5 in Molecular and morphological characterization of Tylenchus zeae n. sp. (Nematoda: Tylenchida) from Corn (Zea mays) in South Carolina
Figure 5: Phylogenetic relationships of Tylenchus zeae n. sp. with other select Tylenchidae, as inferred from an 822 bp alignment of 28S rRNA sequences, according to the GTR + I + G model of nucleotide substitution and incorporated into MrBayes (MB) as described. A 50% majority rule consensus tree was generated with posterior probabilities (PP) shown on appropriate branches, with Bursaphelenchus mucrOnatus as the outgroup. New sequences are indicated in bold.
Figure 1 in Molecular and morphological characterization of Tylenchus zeae n. sp. (Nematoda: Tylenchida) from Corn (Zea mays) in South Carolina
Figure 1: Scanning electron micrograph (SEM) images of Tylenchus zeae n. sp. A: Female specimen, anterior end, arrow pointing toward the excretory pore; B: Female specimen, head; C: Female specimen, face view; D: Lateral field (midbody); E: Female specimen, anal opening; F: Female specimen, vulval opening; G: Male specimen, spicule; H: Female specimen, arrow showing the anal opening; I: Female specimen, tail; J: Male specimen, posterior end.
Figure 5 in Description of Oscheius indicus n. sp. (Rhabditidae: Nematoda) from India
Figure 5: Molecular phylogenetic relationship of Oscheius indicus n. sp. (highlighted in bold) inferred using ITS region. The evolutionary history was inferred by the Bayesian analysis using the General Time Reversible substitution model with gamma-distributed rate variation across sites and a proportion of invariable sites (GTR+G+I). The posterior probability values exceeding 50% are indicated at appropriate clades. The scale bar indicates expected changes per site. Orange and green shaded boxes indicate insectivora and dolichura group, respectively.
Figure 5 in Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
Figure 5: Bayesian consensus tree inferred from 28S D2/D3 under GTR+I+G model (−ln L = 4799.2056; AIC = 9618.4111; freqA = 0.2557; freqC = 0.182; freqG = 0.2892; freqT = 0.2732; R(a) = 0.6259; R(b) = 2.263; R(c) = 1.6102; R(d) = 0.5689; R(e) = 5.2205; R(f) = 1; Pinva = 0.2558; Shape = 0.6827). Posterior probability values exceeding 50% are given on appropriate clades.
Figure 2 in Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
Figure 2: Photographs of Oscheius onirici female. (A) Entire body (arrow showing vulva). (B) Pharyngeal region (arrow showing excretory pore). (C) Head region. (D, E) Lateral view of vulva region (arrow showing vulva). (F) Lateral view of tail region (arrow showing anus). (G) Basal bulb (arrow showing excretory pore).
Figure 4 in Description of Oscheius indicus n. sp. (Rhabditidae: Nematoda) from India
Figure 4: Molecular phylogenetic relationship of Oscheius indicus n. sp. (highlighted in bold) inferred using 28S D2/D3 extension region of 28 rDNA gene. The evolutionary history was inferred by the Bayesian analysis using the General Time Reversible substitution model with gamma-distributed rate variation across sites and a proportion of invariable sites (GTR+G+I). The posterior probability values exceeding 50% are indicated at appropriate clades. The scale bar indicates expected changes per site. Orange and green shaded boxes indicate insectivora and dolichura group, respectively.
Figure 4 in Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
Figure 4: Bayesian consensus tree inferred from 18S under GTR+I+G model (−ln L = 5789.8442; AIC = 11599.6885; freqA = 0.2657; freqC = 0.202; freqG = 0.258; freqT = 0.2743; R(a) = 0.9275; R(b) = 3.6026; R(c) = 2.6802; R(d) = 0.6926; R(e) = 6.3237; R(f) = 1; Pinva = 0.4134; Shape = 0.6825). Posterior probability values exceeding 50% are given on appropriate clades.
Figure 3 in Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
Figure 3: Scanning electron microscope photographs of Oscheius onirici female. (A) Lip region en-face view showing one amphideal aperture (am), six labial sensilla (ls) and two cephalic sensilla (cs). (B) Excrotory pore. (C) Ventral view of vulva. (D) Lateral lines. (E) Entire body lateral view (arrow showing vulva). (F) Esophageal region (arrow showing excretory pore). (G) Lateral field showing lateral lines. (H) Tail region ventral view (Top arrow showing four bacteria, middle arrow showing anus, two bottom arrows showing phasmids).
Figure 6 in Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
Figure 6: Bayesian consensus tree inferred from ITS under TVM+I model (−ln L = 9235.373; AIC = 18488.7461; freqA = 0.2255; freqC = 0.2115; freqG = 0.2393; freqT = 0.3237; R(a) = 1.3757; R(b) = 3.2802; R(c) = 1.847; R(d) = 1.2014; R(e) = 3.2802; R(f) = 1; Pinva = 0.1375; Shape = 1.5896). Posterior probability values exceeding 50% are given on appropriate clades.
Figure 1 in Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA
Figure 1: Oscheius onirici female. (A) Entire body. (B) Pharyngeal region. (C) Lateral view of vulva region and lateral field. (D) Schematic representation of En-face view of lip region. (E) Lateral view of tail region.
Figure 1 in Description of Oscheius indicus n. sp. (Rhabditidae: Nematoda) from India
Figure 1: Oscheius indicus n. sp. (A) Entire male; (B) Entire female; (C) Pharyngeal region; (D) Anterior region; (E) Female reproductive system; (F) Male posterior region showing spicules and gubernaculum; (G) Male tail in dorso-ventral view (genital papillae and bursa); (H) Female posterior region.
Figure 2 in Description of Oscheius indicus n. sp. (Rhabditidae: Nematoda) from India
Figure 2: Oscheius indicus n. sp. (A, B) Anterior region showing stoma; (C) Posterior pharynx.; (D) Genital papillae; (E) Anterior pharynx; (F) Vulva; (G) Male posterior region; (H) Female posterior region; (L) Lateral lines. (Scale bar: 20 µm).
Figure 3 in Description of Oscheius indicus n. sp. (Rhabditidae: Nematoda) from India
Figure 3: Oscheius indicus n. sp. (A) Enface view showing six labial papillae (a to f), (B) Crochet needle-shaped spicules (C) Male posterior region showing genital papillae (GP1 to GP9), (D) Female posterior region showing anal opening (Scale bar: A = 2 µm; B & C = 10 µm, D = 5 µm).
Figure 1 in A new species of the genus Ethmolaimus de Man, 1880 (Nematoda, Ethmolaimidae) from intertidal zone of the Yellow Sea, China
Figure 1. Ethmolaimus multispiralis sp. nov. A. Anterior end of holotype, showing buccal cavity, teeth, cephalic setae, amphidial fovea and cuticle dots; B. Pharyngeal region of female, showing papilliform anterior sensilla, amphid, pharyngeal bulb and excretory system; C. Entire body of holotype; D. Cloacal region of holotype, showing spicule, lateral piece, gubernaculum and precloacal supplement; E. Entire body of female. Scale bars: A, B, D = 20 µm. C, E = 50 µm.
Figure 2 in A new species of the genus Ethmolaimus de Man, 1880 (Nematoda, Ethmolaimidae) from intertidal zone of the Yellow Sea, China
Figure 2. Ethmolaimus multispiralis sp. nov. A. Anterior end of holotype, showing buccal cavity, teeth, outer labial and cephalic setae; B. Anterior end of male, showing amphidial fovea and cuticle dots; C. Amphidial fovea of male; D. Pharyngeal bulb; E. Posterior portion of holotype, showing spicule and precloacal supplement; F. Cloacal region of holotype, showing spicule, lateral piece, gubernaculum and precloacal supplement. Scale bars: A–C = 10 µm; D–F = 20 µm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.