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401
datasets available to search
ShareScore release 0.9.0
Dataset results
401 results for “nuclear genes”
The large GTPase AtGBPL3 links nuclear envelope formation to lamina-associated gene silencing [RNA-seq]
GEO Series GSE221661. Arabidopsis thaliana. 18 samples. Type: Expression profiling by high throughput sequencing.
Study of the functional implication of altered nuclear morphology on global gene expression profile in Drosophila S2R+ cells
GEO Series GSE32525. Drosophila melanogaster. 8 samples. Type: Expression profiling by array.
Pregnancy-induced gene expression and differentiation of mouse mammary epithelium are co-governed by Nuclear Factor IB (NFIB) and STAT5
GEO Series GSE42878. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
HOT3/eIF5B1 confers Kozak motif-dependent translational control of photosynthesis-associated nuclear genes for chloroplast biogenesis
GEO Series GSE212855. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide maps of upregulated or downregulated genes in reconstituted SW48O KOEMT cells without or with a nuclear PTEN (C124S) mutant
GEO Series GSE109968. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profile at single nuclear level of E7.0 Ctrl and Hand1 CKO mouse embryos.
GEO Series GSE245712. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Changes in nuclear shape and gene expression in response to simulated microgravity are LINC complex-dependent
GEO Series GSE153893. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing.
p53 transcription factor mediates nuclear speckle association of target genes
GEO Series GSE154095. Homo sapiens. 12 samples. Type: Other.
Effects of small molecules on gene expression in mouse nuclear transfer embryos at the 2 cell stage
GEO Series GSE95053. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Fat cadherin cleavage releases a transcriptionally active nuclear fragment to regulate target gene expression
GEO Series GSE308183. Drosophila melanogaster. 6 samples. Type: Expression profiling by high throughput sequencing.
Regulation of nuclear gene expression by PK 11195, a ligand specific for the mitochondrial 18 kDa translocator protein (TSPO) (15, 30, and 45 minutes of exposure)
GEO Series GSE85697. Homo sapiens. 12 samples. Type: Expression profiling by array.
The Nuclear Matrix Regulates Gene Induction By Maintaining the Chromatin-Speckle Association and Compartmentalization
GEO Series GSE312034. Homo sapiens. 62 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Transcription factors PLT and chromatin regulators PRC2 and JMJ703 form nuclear condensates to maintain gene repression in bivalent domains controlling cell fate in rice root meristem [RNA-Seq]
GEO Series GSE251803. Oryza sativa Japonica Group. 6 samples. Type: Expression profiling by high throughput sequencing.
Anterograde Regulation of Nuclear-encoded Mitochondrial Genes and FGF21 Signaling by Hepatic Histone Demethylase LSD1
GEO Series GSE145089. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Nuclear translocation of TfR1 facilitating tumor progression via p53-mediated gene regulation
GEO Series GSE271155. Homo sapiens. 42 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Transfer of mitochondrial DNA into the nuclear genome during gene editing [target sequencing]
GEO Series GSE261865. Homo sapiens. 15 samples. Type: Other.
The Nuclear Matrix Regulates Gene Induction By Maintaining the Chromatin-Speckle Association and Compartmentalization [CLIP-Seq]
GEO Series GSE310525. Homo sapiens. 4 samples. Type: Other.
Effects of oral-glucose load on the gene expression of peripheral blood mono-nuclear cells in Asian-Indian men.
GEO Series GSE153837. Homo sapiens. 28 samples. Type: Expression profiling by array.
Nuclear Genome Organization in Fungi: From Gene folding to Rabl Chromosomes
<p>We discuss the current knowledge on the fungal genome organization, from the association of chromosomes within the nucleus to topological structures at individual genes and the genetic factors required for the hierarchical organization. Chromosome conformation capture followed by high-throughput sequencing (Hi-C) has elucidated how fungal genomes are globally organized in Rabl configuration where centromere or telomere bundles are associated with opposite faces of the nuclear envelope. Here, we explore the presence, in fungal taxa, of the typical proteins associated with genome organization in eukaryotes.</p>
Nuclear Genome Organization in Fungi: From Gene folding to Rabl Chromosomes
<p>We discuss the current knowledge on the fungal genome organization, from the association of chromosomes within the nucleus to topological structures at individual genes and the genetic factors required for the hierarchical organization. Chromosome conformation capture followed by high-throughput sequencing (Hi-C) has elucidated how fungal genomes are globally organized in Rabl configuration where centromere or telomere bundles are associated with opposite faces of the nuclear envelope. Here, we explore the presence, in fungal taxa, of the typical proteins associated with genome organization in eukaryotes.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.