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3,761 results for “phylogenetic relationships”
Fig. 1 in Taxonomic re-assessment and phylogenetic relationships of Miocene homonymously spiral-horned antelopes
Fig. 1. Box−plots of the horncore basal compression index (i.e., TD*100/ ADP) for several species and genera of Oiocerina, showing the medial (horizontal line inside the boxes), the 25–75% quartiles (gray boxes) and the minimum and maximum range of values (short horizontal lines). NKT−1, Nikiti−1; RZ1, Ravin des Zouaves 1.
Fig. 5. Phylogenetic relationships between jellyfishes within the order Semaeostomeae inferred from nearly complete 18S in Comprehensive Analysis of the Jellyfish (Goette, 1886) (Semaeostomeae: Pelagiidae) with Description of the Complete rDNA Sequence.
Fig. 5. Phylogenetic relationships between jellyfishes within the order Semaeostomeae inferred from nearly complete 18S rDNA (A) and partial 28S rDNA sequences (B) with maximum-likelihood (ML) algorithms. ML analyses of 18S and 28S were used as the nucleotide substitution model of GTR+G. Two hydrozoans (Hydractinia echinata and Podocoryne carnea for 18S rDNA; Astrohydra japonica and Melicertissa sp. for 28S) were included as the outgroups. Additional Bayesian analysis generated similar topology of the tree compared with the ML tree. Posterior probabilities (PP) from the analyses were incorporated into the ML tree to support the strength of each branch. The first and second numbers at the nodes display bootstrap proportions (BP) (> 50%) in ML and PP (> 0.50) in Bayesian, respectively. Branch lengths are proportional to the scale given. *Represents controversial species names, because they were suspected as different species by Bayha et al. (2017).
Fig. 1. Phylogenetic relationships among 20 in Capoeta saadii
Fig. 1. Phylogenetic relationships among 20 species of Trichomycterus inferred by Maximum Likelihood and Bayesian Inference, from the analysis of a multigene data set (3062 bp). Numbers on each node are bootstrap percentages from ML followed by posterior probability from BI; asterisks indicate maximum support value and hyphens, values under 0.95 for BI and 65 for ML.
Fig. 10. Phylogenetic relationship among primate pinworms inferred from 18S in A pinworm's tale: The evolutionary history of Lemuricola (Protenterobius) nycticebi
Fig. 10. Phylogenetic relationship among primate pinworms inferred from 18S rDNA gene sequences. Numbers at the nodes represent ML/NJ bootstrap values, respectively.
Fig. 9. Phylogenetic relationships among primate pinworms inferred from cox1 in A pinworm's tale: The evolutionary history of Lemuricola (Protenterobius) nycticebi
Fig. 9. Phylogenetic relationships among primate pinworms inferred from cox1 gene sequences. Numbers at the nodes represent ML/NJ bootstrap values, respectively.
Fig. 3 Phylogenetic relationships among the 16 mtDNA haplotypes observed. a in Unveiling cryptic diversity among Müllerian co-mimics: insights from the Western Palaearctic Syntomis moths (Lepidoptera: Erebidae: Arctiinae)
Fig. 3 Phylogenetic relationships among the 16 mtDNA haplotypes observed. a Maximum likelihood tree retrieved by the analysis in IQTREE; support values at the relevant nodes are SH-aLRT support (%) and standard bootstrap support (%) based on 1000 replicates. b Maximum clade credibility tree recovered by the Bayesian analysis in BEAST, showing the divergence time from the most recent common
Fig. 9 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 9. Habitat of Pristimantis marmoratus (Boulenger, 1900). Left. Submontane rainforest in Kaieteur National Park at ca 630 m elevation. Right. Montane rainforest on the slopes of Maringma-tepui, Guyana at ca 1376 m elevation. Photographs by PJRK.
Fig. 8 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 8. Vocalization of Pristimantis marmoratus (Boulenger, 1900); oscillogram and spectrogram obtained using Seewave v. 1.6.4 in R. Spectrogram (top) and oscillogram (below) of one call of IRSNB 14472 from Kaieteur National Park, Guyana. Call recorded at a temperature of 24°C.
Fig. 6. A in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 6. A. Guzmania cf. sphaeroidea (André) André ex Mez, an arboreal bromeliad species used as egg deposition site by Pristimantis marmoratus (Boulenger, 1900) in the Wokomung Massif. B. Egg clutch of Pristimantis marmoratus deposited on a leaf of the arboreal bromeliad Guzmania cf. sphaeroidea in the Wokomung Massif. C. Egg clutch of Anomaloglossus beebei (Noble, 1923) (white arrow) deposited in the phytotelmata of the same plant as in B. D. Dorsolateral view of IRSNB 17916, 11.3 mm SVL, a juvenile of P. marmoratus collected on the slopes of Maringma-tepui, Guyana. Photographs A–C by DBM, D by PJRK.
Fig. 5 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 5. Pristimantis marmoratus (Boulenger, 1900). Intraspecific variation in dorsal (top) and ventral (below) colour patterns in preserved specimens. Photographs by PJRK.
Fig. 4 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 4. Pristimantis marmoratus (Boulenger, 1900) (four individuals at the top) and P. pulvinatus (Rivero, 1968) (two individuals below). Intraspecific variation in dorsal colour pattern and sexual dimorphism in living specimens. Note: the subtle hint of green visible on the lower body and legs of some specimens of P. marmoratus is due to a reflection of the substrate (green leaf). Photographs by PJRK, except the uncollected P. pulvinatus, which is by CBA.
Fig. 3 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 3. Pristimantis marmoratus (Boulenger, 1900). Ventral view of left hand and left foot of a male (top), and ventral view of right hand and right foot of a female (below), both from Kaieteur National Park, Guyana. Photographs by PJRK.
Fig. 2 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 2. Pristimantis marmoratus (Boulenger, 1900). Preserved adult ♂, holotype (BMNH 1947.2.16.92). A. Dorsal view. B. Ventral view. C. Dorsolateral view. Grid squares = 5 mm. Photographs by PJRK.
Fig. 10 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 10. Phylogenetic relationships within the Pristimantis "unistrigatus group" in the Guiana Shield as recovered in the MrBayes analysis (438 bp of the 16S rRNA gene sequence). Values at each node represent statistical support (* = 0.99 or 1). Pristimantis marmoratus (Boulenger, 1900) is highlighted in red.
Fig. 1 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 1. Map of the Eastern Pantepui District showing the known distribution of Pristimantis marmoratus (Boulenger, 1900). Red dots denote localities of confirmed occurrence based either on museum specimens or colour photographs.
Fig. 7 in Amended diagnosis and redescription of Pristimantis marmoratus (Boulenger, 1900) (Amphibia: Craugastoridae), with a description of its advertisement call and notes on its breeding ecology and phylogenetic relationships
Fig. 7. Vocalization of Pristimantis marmoratus (Boulenger, 1900); oscillograms and spectrograms obtained using Raven v. 1.4. A. Oscillogram (top) and spectrogram (below) of three calls of IRSNB 14472 from Kaieteur National Park, Guyana (ca 16 s recording). B. Expanded oscillogram (top) and spectrogram (below) of one call of IRSNB 14471 from Kaieteur National Park, Guyana. C. Expanded oscillogram (top) and spectrogram (below) of one call of IRSNB 14472 from Kaieteur National Park, Guyana. Calls recorded at a temperature of 24°C.
Figure. The phylogenetic tree showing the relationship among Brevibacillus parabrevis strains SA2.2 and TJ2.3, Bacillus licheniformis MG4.2, and their phylogenetically closest type strains. The GenBank accession numbers of the type strains and studied strains are shown following species names. Distance matrix was calculated by Kimura's 2-parameter model. The scale bar indicates 0.02 substitutions per nucleotide position. Alicyclobacillus pohliae AJ564766 served as an out-group. in Distribution of extracellular enzyme-producing bacteria in the digestive tracts of 4 brackish water fish species
Figure. The phylogenetic tree showing the relationship among Brevibacillus parabrevis strains SA2.2 and TJ2.3, Bacillus licheniformis MG4.2, and their phylogenetically closest type strains. The GenBank accession numbers of the type strains and studied strains are shown following species names. Distance matrix was calculated by Kimura's 2-parameter model. The scale bar indicates 0.02 substitutions per nucleotide position. Alicyclobacillus pohliae AJ564766 served as an out-group.
Figure 5. Phylogenetic relationship between P. xylostella RpS27a in Cloning and characterization of ubiquitin ribosome fusion gene RpS27a, a deltamethrin-resistance-associated gene from diamondback moth (Plutella xylostella L.)
Figure 5. Phylogenetic relationship between P. xylostella RpS27a and some other species. Corresponding GenBank accession numbers are: M. sexta: ACY95367.1; P. dardanus: CAH04128.1; Bombyx mori: NP_001091826.1; P. polytes: BAM18943.1; P. xuthus: BAM17728.1; S. frugiperda: AAL62473.1; D. plexippus: EHJ77179.1; A. yamamai: BAD05031.1; P. xylostella: JX437934; T. rubida: AER92457.1; D. melanogaster: NP_476778.1; A. aegypti: AAS79344.1; C. quinquefasciatus: XP_001844485.1.
Fig. 1. Phylogenetic relationship among the Enterocytozoon bieneusi groups. The relationship between the E in New genotypes and molecular characterization of Enterocytozoon bieneusi in captive black bears in China
Fig. 1. Phylogenetic relationship among the Enterocytozoon bieneusi groups. The relationship between the E. bieneusi genotypes identified in this study and other known genotypes deposited in GenBank was inferred by neighbor-joining analysis of ITS sequences based on genetic distance using the Kimura-2-parameter model. The numbers on the branches represent percent bootstrapping values from 1000 replicates, with more than 50% shown in the tree. Each sequence is identified by its accession number, genotype designation, and host origin. Genotypes marked with black rhombuses and black triangles are novel and known genotypes identified in this study, respectively.
Fig. 4 in Molecular prevalence and phylogenetic relationship of Haemoproteus and Plasmodium parasites of owls in Thailand: Data from a rehabilitation centre
Fig. 4. Colour heatmap of pairwise genetic distances estimated from nucleotide sequences of the cytochrome b gene (479 bp) of Haemoproteus spp. based on the Jukes-Canter model. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.