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8,071
datasets available to search
ShareScore release 0.9.0
Dataset results
8,071 results for “transcriptome analysis”
Next Generation Sequencing Facilitates Quantitative Analysis of shNC/sh337/ and EV/337 Transcriptomes
GEO Series GSE146671. Homo. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide transcriptome analysis of VC and VHL-KO Caki-1 cells.
GEO Series GSE196509. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of Rev-erbs skeletal muscle specific knockout muscles and WT muscles
GEO Series GSE249730. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq analysis of transcriptomics in WT and E2-KO, G12D and G12D/E2-KO HSPCs from mouse bone marrow
GEO Series GSE155763. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Longitudinal transcriptomic and epigenetic analysis in astronauts reveals dynamic immune response to spaceflight
GEO Series GSE276323. Homo sapiens. 6 samples. Type: Methylation profiling by high throughput sequencing.
RNA-seq based transcriptome analysis of plant pathogens under salt stress condition
GEO Series GSE272984. Ralstonia solanacearum; Pectobacterium carotovorum subsp. carotovorum; Burkholderia gladioli. 18 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of human cybrid cell lines harboring increasing levels of the mitochondrial DNA (mtDNA) 3243A>G mutation
GEO Series GSE56158. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of Mtb H37Rrv and MtbΔwhiB4 upon treatment with 0.25 mM CHP
GEO Series GSE73877. Mycobacterium tuberculosis H37Rv. 11 samples. Type: Expression profiling by array.
Meta-transcriptome analysis of a natural wheat sourdough ecosystem during a 10-day spontaneous, laboratory fermentation
GEO Series GSE15693. Streptococcus thermophilus; Enterococcus faecalis; Lactobacillus acidophilus; Lacticaseibacillus casei; Weissella confusa; Lentilactobacillus hilgardii; Companilactobacillus farciminis; Fructilactobacillus sanfranciscensis; Bifidobacterium; Brevibacterium linens; Limosilactobacillus pontis; Companilactobacillus mindensis; Pediococcus pentosaceus; Enterococcus faecium; Lactiplantibacillus plantarum; Lactobacillus gasseri; Companilactobacillus alimentarius; Lactobacillus amylovorus; Fructilactobacillus fructivorans; Enterococcus casseliflavus; Limosilactobacillus panis; Furfurilactobacillus rossiae; Leuconostoc mesenteroides; Pediococcus acidilactici; Levilactobacillus brevis; Lentilactobacillus buchneri; Lactobacillus delbrueckii; Lactobacillus helveticus; Limosilactobacillus reuteri; Latilactobacillus curvatus; Lactobacillus johnsonii; Leuconostoc citreum; Leuconostoc pseudomesenteroides; Mammaliicoccus lentus; Lactobacillus crispatus; Lactiplantibacillus paraplant
Transcriptomic analysis of kidney cortex following the KLF6 induction
GEO Series GSE171854. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of S. maltophilia in the exponential and stationary phases and after a treatment with quorum sensing autoinducers.
GEO Series GSE206442. Stenotrophomonas maltophilia K279a. 14 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq analysis of axolotl embryonic oropharyngeal endoderm explants transcriptome
GEO Series GSE151535. Ambystoma mexicanum. 17 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of bacterial vaginosis-associated bacteria living in single or multispecies biofilms
GEO Series GSE268115. Prevotella bivia; Fannyhessea vaginae; Gardnerella vaginalis. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome Analysis Reveals Organ-Specific Effects of 2-Deoxyglucose Treatment in Healthy Mice
GEO Series GSE248967. Mus musculus. 144 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of oxdative-stress induced senescence in human astrocytes
GEO Series GSE58910. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis in endometrioid cell lines with modified Prex2a expression
GEO Series GSE98560. Homo sapiens. 15 samples. Type: Expression profiling by array.
Transcriptome analysis of the broad-host range pathogen Pythium myriotylum during infection of ginger (Zingiberis officinale) leaves.
GEO Series GSE174557. Pythium myriotylum. 12 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome
GEO Series GSE43865. Arabidopsis thaliana. 42 samples. Type: Expression profiling by high throughput sequencing.
In-Depth Patient-specific Analysis of Tumor Heterogeneity in Melanoma Brain Metastasis: Insights from Spatial Transcriptomics and Multi-Region Bulk Sequencing
GEO Series GSE275731. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Comparative whole transcriptome analysis of gene expression in three canine soft tissue sarcoma types
GEO Series GSE208664. Canis lupus familiaris. 16 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.