Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,394
datasets available to search
ShareScore release 0.9.0
Dataset results
2,394 results for “Containers”
fluorescence microscopy image containing more than 65536 cells
<p>1. A montage of fluorescence images containing more than 65536 cells.</p> <p>2. The output label image from Cellpose, as obtained from the BIOP Cellpose wrapper </p>
1. Files containing data from each sample studied and ready to be open in Thellier Tool 4.0 software (Leonardt et al., 2004) for evaluation and determination of archaeointensity and archaeoinclination.
<p>Files containing data from each sample studied and ready to be open in Thellier Tool 4.0 software (Leonardt et al., 2004) for evaluation and determination of archaeointensity and archaeoinclination.</p> <p>Data supporting manuscript entitled “Archaeomagnetic studies of bricks from ancient buildings sampled in SE Poland (Central Europe)” by J. Nawrocki, K. Standzikowski, M. Chadima, T. Werner, M. Łanczont, J. Gancarski, Z. Gil submitted to Journal of Archaeological Science: Reports (JASREP-D-23-00078).</p>
Genome annotation file containing predicted genome features of Phytophthora agathidicida (Strain: 3770, Assembly:ASM2572299v1)
<p>This is the genome annotation file (gff3) containing predicted genome features of the <em>Phytophthora agathidicida </em>(Strain: 3770) genome published in Cox et al (2022). This annotation file is associated with the following entries at Genbank:</p> <p>Assembly: ASM2572299v1<br> Biosample: SAMN19597867<br> BioProject: PRJNA734652</p> <p>Included in the file are predicted functional annotations from Blastp search of all predicted proteins sequences against the Swiss-Prot sequence database (Release 23/02).</p>
data on Marshall properties for asphalt mixtures containing recycled concrete aggregate
<p>these data set about Marshall stability and flow and density void analysis for asphalt mixture surface layer incorporating recycled as coarse aggregate. the data are collected during the work at the transportation lab at Baghdad University and the asphalt lab in Iben-Rushud government company.</p>
IDs of Tweets from 1/1/2019-31/7/2022 that contain the hashtag #burnout.
<p>IDs of Tweets from 1/1/2019-31/7/2022 that contain the hashtag #burnout.</p>
Data from: Bromodomain-containing protein 4 regulates innate inflammation via modulation of alternative splicing (images and qPCR data)
<p class="MsoNormal">Bromodomain-containing Protein 4 (BRD4) is a transcriptional regulator which coordinates gene expression programs controlling cancer biology, inflammation, and fibrosis. In the context of virus-infection, BRD4-specific inhibitors (BRD4i) block the release of pro-inflammatory cytokines and prevent downstream epithelial plasticity<a>. </a>Although the chromatin modifying functions of BRD4 in inducible gene expression have been extensively investigated, its roles in post-transcriptional regulation are not well understood. Given BRD4's interaction with the transcriptional elongation complex and spliceosome, we hypothesize that BRD4 is a functional regulator of mRNA processing. To address this question, we combine data-independent analysis - parallel accumulation-serial fragmentation (diaPASEF) with RNA-sequencing to achieve deep and integrated coverage of the proteomic and transcriptomic landscapes of human small airway epithelial cells exposed to viral challenge and treated with BRD4i. The transcript-level data was further interrogated for alternative splicing analysis, and the resulting datasets were correlated to identify pathways subject to post-transcriptional regulation. We discover that BRD4 regulates alternative splicing of key genes, including Interferon-related Developmental Regulator 1 (IFRD1) and X-Box Binding Protein 1 (XBP1), related to the innate immune response and the unfolded protein response. These findings extend the transcriptional elongation-facilitating actions of BRD4 in control of post-transcriptional RNA processing in innate signaling.</p>
Essential oil-containing solutions release low Ca and P concentrations into the dental enamel without morphology alterations
<p><strong>Background. </strong>The use of natural products such as essential oils has been suggested due to their promising pharmacological effects and economic viability.</p> <p>Aim. To determine hydrogenic potential (pH), titratable acidity (TA), and ion concentrations of five solutions containing essential oils (EO) and evaluate ion concentrations, enamel surface loss, and morphology.</p> <p><strong>Materials & Methods. </strong>The pH, TA, calcium (Ca), potassium (K), and sodium (Na) concentrations of five EO-containing solutions were measured. Bovine enamel specimens were submitted to two daily 30-sec immersions in artificial saliva, citric acid, distilled water, BaCloTea, GeLaTeaPep, EucaLem, Cinnamon, or Spearmint solutions for 14 days. Ca, K, Na, and phosphorus (P) were quantified through ions chromatography, enamel surface loss was determined by profilometry, and surface morphology was qualitatively analyzed through scanning electron microscopy. Data were submitted to one-way ANOVA and Tukey (p<0.05).</p> <p><strong>Results. </strong>The five EO-containing solutions presented significantly lower pH values than distilled water (p<0.05). The GeLaTeaPep group presented a significantly higher TA value than BaCloTea (p<0.05), which in turn showed a significantly higher TA value than the other solutions (p<0.05). The distilled water presented significantly higher Ca, K, and Na concentrations than all EO-containing solutions (p<0.05). The enamel exposed to EO-containing solutions showed lower Ca and P concentrations than artificial saliva (control) as well as significantly higher surface loss; however, the surface morphology was similar to the artificial saliva.</p> <p><strong>Conclusion. </strong>EO-containing solutions have low pH, TA, and low concentrations of Ca, Na, and K. Moreover, enamel exposed to these solutions showed low Ca and P concentrations and slight surface loss without morphology alteration.</p>
ISOLDE model and validation statistics to support: Guanine-containing ssDNA and RNA induce dimeric and tetrameric SAMHD1 in cryo-EM and binding studies
<p>These files provide the pdb atom coordinates and structural validation of the ISOLDE structural model (Fig. 6) contained in the manuscript "Guanine-containing ssDNA and RNA induce dimeric and tetrameric SAMHD1 in cryo-EM and binding studies" </p>
Database containing Raw Data of Growth and Survival of Pathogens and Microbiota from Fate Studies in Artisanal Fermented Foods
<p>Deliverable 5.5 is a spreadsheet containing metadata and raw data obtained from the fate studies conducted in Workpackage 5. In case of reutilisation of these data, the source should be properly cited.</p>
Location-Aware Container Scaling (LACS) in Geo-distributed Clouds
<p>Datasets and code for the problem of location-aware container scaling (LACS) in geo-distributed clouds:</p> <p>Randomly extracted one day’s workload from WikiBench and NASA HTTP: AppWorkload.py</p> <p>Facebook subscribers by January 2020 to simulate the distribution of application requests among different user regions: FacebookUserData.csv</p> <p>Sprint IP Network location as 82 user regions from 35 countries on 6 continents: SprintLocation.csv</p> <p>Observation on the network latency matrix among 82 user centres: LatencyMatrix.py</p> <p>Representative code using openAI's gym environment: deepscale.py</p>
Raw data containing microsatellite genotypes and otolith microchemistry data for Lutjanus argentiventris individuals from Galapagos (Ecuador) and the Gulf of California (Mexico)
<p>The dataset contains the raw microsatellite genotypes and otolith microchemistry data for yellow snapper (Lutjanus argentiventris) individuals from Galapagos (Ecuador) and the Gulf of California (Mexico), described in the journal publication:</p> <p>Cavole LM, Munguia-Vega A, Miller JA, Salinas-de-Leon P, Marin Jarrin JR, Johnson AF, Laplane ER, Giron-Nava A, Aburto-Oropeza O (2023) Combining otolith chemistry and genetics to infer the population structure of yellow snapper <em>Lutjanus argentiventris. </em>Ecosphere.</p> <p> </p> <p> </p>
Negative sample sequences contained in datasets D1-D7
<p>These are the negative sample sequences contained in datasets D1-D7, which do not contain the correct barcode.</p>
Validation of Fracture Caging to Contain Hydraulic Fractures: Timeseries, Videos, and Model Script
<p>The data file include an Excel spreadsheet and two videos for each experimental test.</p> <p>You can start with reading the ReadMeFirst.txt file to understand the whole structure of the dataset.</p> <p>The caging_model.txt file includes python codes to calculate critical flow rates and uncaged fracture radius according to the theory that the authors developed and will be published soon.</p>
A Dataset Containing Tiny Vehicle Images Collected in Low Quality Imaging Conditions
<p>This dataset contains 4800 tiny and low resolution vehicle images collected in low lighting and different weather conditions. The vehicles in the images are grouped in six classes: Bike, Car, Juggernaut, Minibus, Pickup, and Truck. For each class, there are 800 vehicle images with 100 × 100 pixels and 96 dpi resolution.</p> <p>The peer-reviewed data descriptor for this dataset has been published in MDPI Sustainability - an open access journal, and can be accessed here: <a href="https://doi.org/10.3390/su152316292">https://doi.org/10.3390/su152316292</a>. Please cite this when using the dataset.</p>
Zip archive containing datasets described in the manuscript entitled "Distribution-agnostic Deep Learning Enables Accurate Single‐Cell Data Recovery and Transcriptional Regulation Interpretation"
<p>The datasets used in the manuscript entitled "Distribution-agnostic Deep Learning Enables Accurate Single‐Cell Data Recovery and Transcriptional Regulation Interpretation". These datasets encompass all the experiments conducted in the manuscript, including simulation experiments, downsampling experiments, clustering, differential expression analysis, enrichment analysis, trajectory inference, batch correction, and clinical case discovery.</p> <p>The open-source software is available at https://github.com/XuYuanchi/Bis.</p>
Data for paper: Genomic data reveals new species and the limits of mtDNA barcode diagnostics to contain a global pest species complex (Diptera: Tephritidae: Dacinae)
<p>Files in this repository:</p><p>"COI_alignment.fas.zip" Zipped file of the FASTA alignment of the COI sequences.</p><p>"COI_IQtree.treefile" Newick treefile resulting from the IQ-tree analysis of the COI alignment.</p><p>"RAD-loci_alignment.nex.zip" Zipped file of the NEXUS alignment of RAD loci of 2295 samples.</p><p>"RAD-loci_IQtree.tre" Newick treefile resulting from the IQ-tree analysis of the RAD-loci alignment.</p><p>"RAD-SNP_alignment.usnps.nex" NEXUS alignment of the RAD-SNP data of 50 samples.</p><p>"RAD-SNP_SNAPP.trees" Set of Newick trees resulting from the BEAST SNAPP analysis.</p>
SCP-1155 Containment Area
Published on Dec 20, 2014. SCP-1155 manifests as a work of street art/graffiti depicting the form of a humanoid creature with sinewy forelimbs, claw-like hands and the head and feathers of an owl. The depicted pose is variable, but tends towards a predatory stance, with eyes that appear to track the viewer. SCP Wiki Link- http://www.scp-wiki.net/scp-1155 Art Work Creater https://aminoapps.com/c/scp-foundation/page/blog/scp-1155-predatory-street-art/EEW2_QaUPuxP2LE0lQlNGRJn4apQ0XEBJx Source: Objaverse 1.0 / Sketchfab
Square lidded ritual wine container (fangyi)
Smithsonian source data can be found [here](https://ids.si.edu/ids/media_view?id=3d_package:d8c62f94-4ebc-11ea-b77f-2e728ce88125) This media file is in the public domain (free of copyright restrictions). You can copy, modify, and distribute this work without contacting the Smithsonian. For more information and to review the 3D disclaimer, visit the Smithsonian's [Terms of Use](https://www.si.edu/Termsofuse) page. Square lidded ritual wine container (fangyi) with taotie, serpents, and birds Medium: Bronze Dimensions: H x W x D: 35.3 x 24.8 x 23.3 cm (13 7/8 x 9 3/4 x 9 3/16 in) Type: Metalwork, Vessel Origin: Luoyang, Henan province, China Date: ca. 1050-975 BCE Period: Early Western Zhou dynasty Credit Line: Purchase — Charles Lang Freer Endowment Accession Number: F1930.54a-b Data Source: Freer Gallery of Art and Arthur M. Sackler Gallery EDAN-URL: edanmdm:fsg_F1930.54a-b Source: Objaverse 1.0 / Sketchfab
Dual structure of a vanadyl-based molecular qubit containing a bis(β-diketonato) ligand. Open dataset
<p>Data supporting the original figures 2, 4, 6, and 7 of the related publication</p>
Trial to Assess the Impact of PrEP to Tenofovir Gel on the Efficacy of Tenofovir-containing ART on Viral Suppression
ClinicalTrials.gov study NCT01387022. IPD Sharing: Not stated. Countries: 1. Publications: 7.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.