Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
894
datasets available to search
ShareScore release 0.9.0
Dataset results
894 results for “Single-cell RNA-seq”
Single-cell RNA-Seq of premature Rhesus macaques lungs with intra-uterine inflammation and therapuetic blockade
GEO Series GSE169390. Macaca mulatta. 13 samples. Type: Expression profiling by high throughput sequencing.
Integration of miRNA in exosomes and single-cell RNA-seq profiles in endemic osteoarthritis, Kashin-Beck disease
GEO Series GSE246097. Homo sapiens. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Spatially discrete signalling niches regulate fibroblast heterogeneity in human lung cancer [single-cell RNA-seq]
GEO Series GSE153935. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Single-cell RNA-seq profiling of early murine adrenogonadal development
GEO Series GSE156176. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA-Seq Reveals Collagen VI Antibody-Induced M2-Like Macrophages Expressing Lyve1 Reduce Atherosclerotic Plaque Area in Apoe-/- Mice
GEO Series GSE215103. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptional response of placenta to the ablation of Caveolin-1 in mice: insights into the regulation of brain-placental axis [bulk RNA-seq]
GEO Series GSE248093. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Spike-in normalization for single-cell RNA-seq reveals dynamic global transcriptional activity mediating anti-cancer drug response
GEO Series GSE162256. Homo sapiens. 372 samples. Type: Expression profiling by high throughput sequencing.
Droplet-based Single-cell Total RNA-seq Reveals Differential Non-Coding Expression and Splicing Patterns during Mouse Development
GEO Series GSE176588. Mus musculus; Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of long bone epiphyses from control and Sox9 mutant mice
GEO Series GSE162033. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic profiling of thymocytes in CDC42-deficient and wild-type mice using single-cell RNA-seq
GEO Series GSE289949. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cells
GEO Series GSE76983. Mus musculus. 23 samples. Type: Expression profiling by high throughput sequencing.
Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets
GEO Series GSE226663. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell RNA-seq of the developing C57BL/6 mouse ovary from E11.5 to E14.5
GEO Series GSE128553. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of mouse kidneys undergoing ferroptosis
GEO Series GSE197528. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA-seq of Postnatal Development of Cardiomyocyte
GEO Series GSE156482. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of Atg7 knockout mice reveals ATG7’s role in antimicrobial immunity against nontuberculous mycobacteria
GEO Series GSE297620. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and Bulk Transcriptomics of the Human Submandibular Gland Reveals Conserved Factors and Pathways [Bulk RNA-seq]
GEO Series GSE199208. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq (Smart-seq2) of MGE of E13.5 mice
GEO Series GSE104157. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-Seq
GEO Series GSE99701. Mus musculus. 262 samples. Type: Expression profiling by high throughput sequencing.
In vitro capture and characterization of embryonic rosette-stage pluripotency between naive and primed states (II, single-cell RNA-Seq data)
GEO Series GSE145726. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.