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391
datasets available to search
ShareScore release 0.9.0
Dataset results
391 results for “Spatial analysis”
Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections
GEO Series GSE221106. synthetic construct; Mus musculus. 8 samples. Type: Other.
Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: RNA-seq analysis
GEO Series GSE276060. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome]
GEO Series GSE269543. Mus musculus. 4 samples. Type: Other.
Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis
GEO Series GSE308486. Homo sapiens. 6 samples. Type: Other.
Polymer-mediated oligo delivery enables construction of spatially encoded 3D cultures for analysis by single-cell RNA sequencing
GEO Series GSE245416. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Spatial-Temporal Analysis Revealed the Dynamic Changes of Leukemia Neighborhood After Receiving Pembrolizumab and Decitabine
GEO Series GSE271406. Homo sapiens. 55 samples. Type: Expression profiling by high throughput sequencing.
Deciphering hypoxia related glioblastoma-associated macrophages and predicting prognostic markers by single-cell, spatially-resolved transcriptomics and experimental analysis
GEO Series GSE251908. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Modular organization of mouse prefrontal cortex subnetwork revealed by spatial single-cell multi-omic analysis of SPIEDER-Seq
GEO Series GSE273066. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer
GEO Series GSE311294. Homo sapiens. 5 samples. Type: Other.
Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state
GEO Series GSE313636. Mus musculus. 4 samples. Type: Other.
Spatial transcriptome analysis of mouse placenta in different developmental time points
GEO Series GSE214004. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension
GEO Series GSE277936. Mus musculus. 4 samples. Type: Other.
Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome
GEO Series GSE276083. Homo sapiens. 7 samples. Type: Other.
Spatial Transcriptomics Analysis of Uterine Gene Expression in Enhancer of Zeste Homolog 2 (Ezh2) Conditional Knockout Mice
GEO Series GSE181885. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analysis of CLDN6-positive solid and small cluster areas in human ovarian cancer
GEO Series GSE317400. Homo sapiens. 16 samples. Type: Other.
FIGURE 4 in Spatial richness analysis and an evaluation of extinction risk for the genus Pachyphytum (Crassulaceae), with the description of a new species from Sierra Madre Occidental, Mexico
FIGURE 4. Habitat (A–C) and habit (D) of Pachyphytum odam Art. Castro & P. Carrillo.
Use of Vegetation Change Tracker, Spatial Analysis, and Random Forest Regression to Assess the Evolution of Plantation Stand Age in Southeast China
<p>It is crucial to determine the spatio-temporal distribution patterns of forest ages across wide regions, as forest management plans and practices, and ecosystem carbon budgeting are highly dependent on these. However, given frequent deforestation events (e.g., harvesting) and rapid recovery of plantation stands in Southern China, field-based forest age measurements over wide regions are time-consuming, labour-intensive, and costly. In the current study, we mapped the spatio-temporal patterns of forest stand ages across three typical plantations in Southern China. This was accomplished by using two new feasible and accurate methods, 1) integrating vegetation change tracker (VCT) algorithm and spatial analysis (VCT-SA) for the pixels that were disturbed at least once from 1987 to 2017, and 2) integrating VCT and random forest (VCT-RF) for the pixels were not disturbed during the study period. The results revealed the spatio-temporal distribution of age structure, which indicated that the plantation stands in our large study area were increasingly aging.</p>
Trend analysis and random forests models assessing spatial and temporal patterns of wildfire probability for the eastern United States
<p>We used historic fire perimeters from Monitoring Trends in Burn Severity to assess trends and drivers of wildfires in the eastern United States. We used a suite of predictor variables relating to weather, vegetation cover, and human infrastructure to parameterize random forests models predicting fire occurrence. Models were used to project annual burned areas using all selected predictors, and to project the marginal response of annual burned areas to the most important weather predictors. This dataset includes Python scripts, raster maps of fire probability, and tables summarizing analysis results. </p>
Single-cell and spatial transcriptomic analysis of homeostatic adult human skin
GEO Series GSE173651. Homo sapiens. 6 samples. Type: Other.
Spatial transcriptome analysis reveals the lymph node atlas of breast cancer metastases
GEO Series GSE189042. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.