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3,655
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3,655 results for “Structural data”
Ice Storm Experiment (ISE) Canopy Structure Data, 2015-present
To evaluate the effects of ice storm disturbance on forest canopy structure and complexity terrestrial lidar data were collected within the Hubbard Brook Ice Storm Experiment plots starting in 2015 (prior to ice treatment) and annually thereafter. Data were collected using a ground-based portable canopy lidar (PCL) system during the growing season in August of each year along 5 permanently marked 30 m transects in each 20 x 30 m ISE plot. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
Data set related to the manuscript "Ionic liquids under confinement: From systematic variations of the ion and pore sizes towards an understanding of structure and dynamics in complex porous carbons"
<p>Graphical files in the agr format for all the figures in the main text of the manuscript entitled "Ionic liquids under confinement: From systematic variations of the ion and pore sizes towards an understanding of structure and dynamics in complex porous carbons" (10.1021/acsami.9b16740). Example of input file for one of the systems simulated.</p>
3D Cortical Bone and Trabecular Bone Structure [synthetic data, simple, capsule shell model]
<p>Trabecular bone patterns are mimicked by generating and arranging "capsule shells" in a three-dimensional voxel by following probability distribution. Ground truth (gt) contains 4 labels (Background: 0, Cortical Bone: 11, Trabecular Bone: 21, Cavity: 31).</p>
Data for paper: Control of fault weakening on the structural styles of underthrusting-dominated non-cohesive accretionary wedges
<p>This repository contains data related to the paper:<br> A. Bauville, M. Furuchi and M. Gerbault, Control of fault weakening on the structural styles of underthrusting-dominated non-cohesive accretionary wedges, Journal of Geophysical Research, 2020.</p> <p>It contains data for all simulations shown in Fig. 7 (last timestep)</p> <p>List of file for each simulations:<br> modelState.json: json file containing various information about the state of the model<br> particles_strain.bin: binary file containing strain data for all particles<br> particles_x.bin: current x position for all particles<br> particles_y.bin: current y position for all particles<br> particles_xIni.bin: initial x position for all particles<br> particles_yIni.bin: initial y position for all particles</p> <p># File format<br> n, u, data</p> <p>n = number of particles bytesize=[1 * int32]<br> u = characteristic unit bytesize=[1 * double]<br> data = data for n particles bytesize=[n * single]</p> <p># example to extract data from bin files in python<br> import numpy as np<br> import os</p> <p>with open(FileName, 'rb') as f:<br> f.seek(12, os.SEEK_SET)<br> data = np.fromfile(f, dtype=np.single, count=-1, sep='')</p>
Accompanying dataset for "Nappe oscillations on free-overfall structures, data from laboratory experiments (audio and video)"
<p>This dataset accompanies the manuscript "Nappe Oscillations on Free-Overfall Structures: Data from Laboratory Experiments" submitted to Scientific Data.</p> <p>This dataset contains raw audio and video data, which complement the dataset uploaded at: <a href="https://zenodo.org/record/3381078#.XlUGVSFKiUk">https://zenodo.org/record/3381078#.XlUGVSFKiUk</a></p> <p>The names of the folders describe each one of the 52 experiments, with respect to the submitted paper in Scientific Data:</p> <p>- M1 and M2 denote Model 1 and Model 2, respectively.</p> <p>- C and UC denote confined and unconfined nappe, respectively.</p> <p>- QR, THR, HR, R, and RR denote the crest type of the weir as explained in the paper.</p> <p>- W is the width of the crest and L is the falling height.</p>
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102974 (ID: mpro-x1458 / PDB: 5RFY)
Raw diffraction data for mpro-x1458 / PDB ID 5RFY (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFY) - SARS-CoV-2 main protease in complex with PCM-0102974 (SMILES:CC(C)N(C)C(=O)C1CCN(CC1)C(=O)CCl) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102254 (ID: mpro-x1425 / PDB: 5RFX)
Raw diffraction data for mpro-x1425 / PDB ID 5RFX (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFX) - SARS-CoV-2 main protease in complex with PCM-0102254 (SMILES:COc1ccc(cc1)N2CCN(CC2)C(=O)CCl) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102121 (ID: mpro-x1402 / PDB: 5RFU)
Raw diffraction data for mpro-x1402 / PDB ID 5RFU (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFU) - SARS-CoV-2 main protease in complex with PCM-0102121 (SMILES:ClCC(=O)N1CCN(CC1)S(=O)(=O)c2ccc(Cl)s2) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102432 (ID: mpro-x1392 / PDB: 5RFT)
Raw diffraction data for mpro-x1392 / PDB ID 5RFT (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFT) - SARS-CoV-2 main protease in complex with PCM-0102432 (SMILES:ClCC(=O)N1CC(c2ccccc2)c3ccccc3C1) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102169 (ID: mpro-x1385 / PDB: 5RFR)
Raw diffraction data for mpro-x1385 / PDB ID 5RFR (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFR) - SARS-CoV-2 main protease in complex with PCM-0102169 (SMILES:ClCC(=O)N1CCN(Cc2ccc(Br)s2)CC1) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102868 (ID: mpro-x1375 / PDB: 5RFN)
Raw diffraction data for mpro-x1375 / PDB ID 5RFN (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFN) - SARS-CoV-2 main protease in complex with PCM-0102868 (SMILES:Fc1ccc(cc1)N(C2CS(=O)(=O)C=C2)C(=O)CCl) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102190 (ID: mpro-x1382 / PDB: 5RFP)
Raw diffraction data for mpro-x1382 / PDB ID 5RFP (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFP) - SARS-CoV-2 main protease in complex with PCM-0102190 (SMILES:CC(NC(=O)CCl)c1cccc(Cl)c1) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102179 (ID: mpro-x1384 / PDB: 5RFQ)
Raw diffraction data for mpro-x1384 / PDB ID 5RFQ (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFQ) - SARS-CoV-2 main protease in complex with PCM-0102179 (SMILES:ClCC(=O)Nc1cccc(c1)N2CCCC2=O) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102972 (ID: mpro-x1380 / PDB: 5RFO)
Raw diffraction data for mpro-x1380 / PDB ID 5RFO (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFO) - SARS-CoV-2 main protease in complex with PCM-0102972 (SMILES:ClCC(=O)N1CCC(CC1)C(=O)N2CCCCC2) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with Z509756472 (ID: mpro-x1249 / PDB: 5RFE)
Raw diffraction data for mpro-x1249 / PDB ID 5RFE (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RFE) - SARS-CoV-2 main protease in complex with Z509756472 (SMILES:O=C(NCC=1C=CC(C#N)=CC1)N2CCOCC2) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with NCL-00024905 (ID: mpro-x0967 / PDB: 5RG1)
Raw diffraction data for mpro-x0967 / PDB ID 5RG1 (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RG1) - SARS-CoV-2 main protease in complex with NCL-00024905 (SMILES:CC(=O)NC(Cc1ccc(cc1)O)C(=O)NCC#CBr) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with NCL-00023830 (ID: mpro-x0946 / PDB: 5RF1)
Raw diffraction data for mpro-x0946 / PDB ID 5RF1 (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5RF1) - SARS-CoV-2 main protease in complex with NCL-00023830 (SMILES:BrC1=CC=C(S(N)(=O)=O)C=C1) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with POB0129 (ID: mpro-x0874 / PDB: 5REZ)
Raw diffraction data for mpro-x0874 / PDB ID 5REZ (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5REZ) - SARS-CoV-2 main protease in complex with POB0129 (SMILES:O=C([C@@H]1[C@H](C2=CSC=C2)CCC1)N) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0103016 (ID: mpro-x0734 / PDB: 5REM)
Raw diffraction data for mpro-x0734 / PDB ID 5REM (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5REM) - SARS-CoV-2 main protease in complex with PCM-0103016 (SMILES:[O-][N+](=O)c1ccccc1N2CCN(CC2)C(=O)CCl) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
Raw diffraction data for structure of SARS-CoV-2 main protease with PCM-0102241 (ID: mpro-x0689 / PDB: 5REJ)
Raw diffraction data for mpro-x0689 / PDB ID 5REJ (see: https://www.ebi.ac.uk/pdbe/entry/pdb/5REJ) - SARS-CoV-2 main protease in complex with PCM-0102241 (SMILES:ClCC(=O)N1CCN(CC1)S(=O)(=O)c2cccs2) collected as part of an XChem crystallographic fragment screening campaign on beamline i04-1 at Diamond Light Source. The deposited structure was automatically processed with standard Diamond tools and PanDDA, however the raw data are being made available to allow reanalysis by any interested party. For more details see: https://www.diamond.ac.uk/covid-19/for-scientists/Main-protease-structure-and-XChem.html
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.