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Fig. 3 in Molecular prevalence and phylogenetic relationship of Haemoproteus and Plasmodium parasites of owls in Thailand: Data from a rehabilitation centre
Fig. 3. Bayesian phylogeny based on partial cytochrome b gene (479 base pairs) of Haemoproteus species lineages. The lineages reported in this study are given in bold. MalAvi lineage codes and GenBank accession numbers are given after species names. Node values (in percentages) indicate posterior clade probabilities. Vertical bars indicate clades of Haemoproteus subgenus (A), Parahaemoproteus (B). Almost all of the Parahaemoproteus lineages recovered from owls were grouped together (clade B-1, grey box). * indicates lineages infecting Strigiformes.
Text-fig. 6. Most parsimonious tree obtained after addition of Acaciaephyllum to the data set of Doyle (2008), with modifications discussed in the text, and with relationships of other taxa fixed with a backbone constraint tree based on results of Doyle (2008). Relative parsimony of alternative positions of Acaciaephyllum is indicated as in Text-fig. 2. Gnet = Gnetales. in Early Cretaceous Monocots: A Phylogenetic Evaluation
Text-fig. 6. Most parsimonious tree obtained after addition of Acaciaephyllum to the data set of Doyle (2008), with modifications discussed in the text, and with relationships of other taxa fixed with a backbone constraint tree based on results of Doyle (2008). Relative parsimony of alternative positions of Acaciaephyllum is indicated as in Text-fig. 2. Gnet = Gnetales.
Text-fig. 2. Representative most parsimonious trees obtained after addition of Liliacidites to (A) the D&E tree (Text-fig. 1) and (B) the J/M tree, with relationships among major clades based on the plastid genome analyses of Jansen et al. (2007) and Moore et al. (2007). Thicker lines indicate all most parsimonious (MP), one step less parsimonious (MP+1), and two step less parsimonious (MP+2) positions for Liliacidites. Abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation
Text-fig. 2. Representative most parsimonious trees obtained after addition of Liliacidites to (A) the D&E tree (Text-fig. 1) and (B) the J/M tree, with relationships among major clades based on the plastid genome analyses of Jansen et al. (2007) and Moore et al. (2007). Thicker lines indicate all most parsimonious (MP), one step less parsimonious (MP+1), and two step less parsimonious (MP+2) positions for Liliacidites. Abbreviations as in Text-fig. 1.
Text-fig. 12. Cladogram showing the systematic position of Protothymallus within the Cyprinidae (for the character states see Tab. 1). in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Text-fig. 12. Cladogram showing the systematic position of Protothymallus within the Cyprinidae (for the character states see Tab. 1).
Text-fig. 4. Protothymallus elongatus (KRAMBERGER, 1885): ventral detail of the neurocranium (SMMGD SaT-168). in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Text-fig. 4. Protothymallus elongatus (KRAMBERGER, 1885): ventral detail of the neurocranium (SMMGD SaT-168).
Text-fig. 6. Protothymallus elongatus (KRAMBERGER, 1885): maxilla (the arrow marks the maxillary foramen; SMMGD Sat-165: 1). in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Text-fig. 6. Protothymallus elongatus (KRAMBERGER, 1885): maxilla (the arrow marks the maxillary foramen; SMMGD Sat-165: 1).
Text-fig. 2: Reconstruction of Protothymallus elongatus (KRAMBERGER, 1885) based on NHMV-1883, SMMGD-SaT 173, and UL-V2. in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Text-fig. 2: Reconstruction of Protothymallus elongatus (KRAMBERGER, 1885) based on NHMV-1883, SMMGD-SaT 173, and UL-V2.
Plate 2 in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Plate 2: Protothymallus elongatus (KRAMBERGER, 1885), articulated juvenile skeleton (SL 30.5 mm) from Seifhennersdorf (SMMGD Harald Walther collection, without number), (Photo: Bastian, Dresden).
Plate 1 in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Plate 1: Protothymallus elongatus (KRAMBERGER, 1885), articulated adult skeleton (SL 125 mm) from Seifhennersdorf (MNB MB.f.2820), (Photo: Harre, Berlin).
Text-fig. 1: Distribution of Cenozoic volcanites (gray shaded areas) along the Ohře/Eger rift and the position of localities with Protothymallus elongatus (KRAMBERGER, 1885) including their K-Ar ages (from Bellon et al. 1998). in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Text-fig. 1: Distribution of Cenozoic volcanites (gray shaded areas) along the Ohře/Eger rift and the position of localities with Protothymallus elongatus (KRAMBERGER, 1885) including their K-Ar ages (from Bellon et al. 1998).
Text-fig. 5. Protothymallus elongatus (KRAMBERGER, 1885): partly disarticulated skull (SMMGD SaT-141). in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Text-fig. 5. Protothymallus elongatus (KRAMBERGER, 1885): partly disarticulated skull (SMMGD SaT-141).
Text-fig. 11. Protothymallus elongatus (KRAMBERGER, 1885): scale from the Caudale peduncle (SMMGD SaT161). in Revision Of The Cyprinids From The Early Oligocene Of The České Středohoří Mountains, And The Phylogenetic Relationships Of Protothymallus Laube, 1901 (Teleostei, Cyprinidae, Gobioninae)
Text-fig. 11. Protothymallus elongatus (KRAMBERGER, 1885): scale from the Caudale peduncle (SMMGD SaT161).
Figure 1 in Phylogenetic relationships among populations of Pristurus rupestris Blanford, 1874 (Sauria: Sphaerodactylidae) in southern Iran
Figure 1. Map of southern Iran and coastal regions of Persian Gulf showing localities of samples used in this study. 1- Busheher; 2- Dayyer; 3- Siraf; 4- Nayband; 5- Charak; 6- Gheshm; 7- Bandar Abas; 8- Minab; 9- Jask; 10- Konarak; 11- Guater.
Figure 1 in Phylogenetic relationships of the vulnerable wild cattle, Malayan gaur (Bos gaurus hubbacki), and its hybrid, the selembu, based on maternal markers
Figure 1. Neighbor-joining tree of the 12S rRNA gene. The numbers at the branches stand for bootstrap values (%) of 1000 replications.
Figure 1. A neighbour-joining tree using 604 cytochrome C oxidase sub-unit I in Phylogenetic relationship among slender loris species (Primates, Lorisidae: Loris) in Sri Lanka based on mtDNA CO1 barcoding
Figure 1. A neighbour-joining tree using 604 cytochrome C oxidase sub-unit I (CO1) sequences from 7 different slender loris (Loris) taxas, rooted using slow loris (Nycticebus) sequences deposited in the GenBank.
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732). in A study of genetic diversity among different population of Orthochirus sp. based on cytochrome C oxidase subunit I and 16srRNA sequencing
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732).
Figure S2 in Inferring phylogenetic relationships in the common vole (Microtus arvalis) based on mitochondrial and nuclear sequence diversities
Figure S2. ABGD results of COXI gene. The histogram shows distribution of genetic distances among M. arvalis samples; yellow columns show mean intralineage distances and red columns show interlineage distances. The diagram implies the lineages according to initial partitions = Group 1 (n: 21): Anatolia, China, Asian and European parts of Russia; Group 2 (n: 16): Serbia, Hungary.
Figure S1 in Inferring phylogenetic relationships in the common vole (Microtus arvalis) based on mitochondrial and nuclear sequence diversities
Figure S1. ABGD results of CYTB gene region. The histogram shows distribution of genetic distances among M. arvalis samples; yellow columns show mean intralineage distances and red columns show interlineage distances. The diagram implies the lineages according to initial partitions = Group 1 (n: 56): Anatolia, Georgia, Armenia, Iran, Siberia, China, Asian parts of Russia and one sample from Ukraine; Group 2 (n: 31): European parts of Russia, three samples from Ukraine, Western, Central and Eastern Europe.
Figure 7 in Inferring phylogenetic relationships in the common vole (Microtus arvalis) based on mitochondrial and nuclear sequence diversities
Figure 7. Bayesian tree obtained from IRBP sequences based on HKY + G parameter (Hasegawa et al., 1985). Numbers on branches show posterior probability (pb) values above 50%.
Figure 6 in Inferring phylogenetic relationships in the common vole (Microtus arvalis) based on mitochondrial and nuclear sequence diversities
Figure 6. Median-joining network obtained from IRBP haplotypes of Anatolian, Asian and European populations of M. arvalis. Number of mutations are shown by black lines on the branches.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.