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TWIN SEEDS Work Package 1 data
<p>Data collected within Work Package 1 of the Horizon Europe project TWIN SEEDS (Grant agreement ID: 101056793).</p> <p>The WP1 report "Trends and drivers of global value chains and the role of MNEs in the recent wave of globalisation", using as inputs these data is publicly accessible here: https://twinseeds.eu/wp-content/uploads/2023/09/WP1-report-FINAL.pdf</p>
Dataset for "Application of Digital Twins for Simulation Based Tailoring of Laser Induced Graphene"
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Twin-Width Benchmark Results for Branch & Bound and SAT Encodings
<p>Benchmark results on TWLIB and PACE 2023 benchmarks for different twin-width algorithms.</p>
Simulation and experimental data of frequency domain and time domain optical signal measurements for optical network digital twins
<p>The dataset contains IQ optical constellation samples for 16-QAM optical connections. Data have been generated both experimentally and through simulations with a MATLAB-based simulator. Different configurations have been simulated: 62 lightpaths having a different number of spans and links and 4 soft-failures affecting a lightpath with increasing failure magnitude.</p>
Figure 4 from: Keresztes L, Kappert J, Henning M, Török E (2021) Helen's twins in the Balkans: discovery of two new Paraptychoptera Tonnoir, 1919 species closely related to P. helena Peus, 1958, with systematic revision of the "lacustris" group (Diptera, Ptychopteridae). ZooKeys 1071: 63-81. https://doi.org/10.3897/zookeys.1071.58598
Figure 4 Ptychoptera helena, paratype male (ZFMK) a habitus male b head and thorax dorsal c right wing d epandrium, dorsal e subapical lobe of epandrium, ventral f gonocoxite and gonostylus complex, dorsal g gonostylus anterior and medial lobules, caudal h hypandrium, caudal i paramere, ventral j aedeagal complex, dorsal.
Figure 2 from: Keresztes L, Kappert J, Henning M, Török E (2021) Helen's twins in the Balkans: discovery of two new Paraptychoptera Tonnoir, 1919 species closely related to P. helena Peus, 1958, with systematic revision of the "lacustris" group (Diptera, Ptychopteridae). ZooKeys 1071: 63-81. https://doi.org/10.3897/zookeys.1071.58598
Figure 2 Ptychoptera castor sp. nov. a flagellum of antennae b right wing c epandrium, dorsal d subapical lobe of epandrium, ventral e left gonocoxite with gonocoxite lobes f anterior and medial lobules, details g hypandrium, caudal h paramere, ventral i aedeagal complex, dorsal.
Figure 6 from: Keresztes L, Kappert J, Henning M, Török E (2021) Helen's twins in the Balkans: discovery of two new Paraptychoptera Tonnoir, 1919 species closely related to P. helena Peus, 1958, with systematic revision of the "lacustris" group (Diptera, Ptychopteridae). ZooKeys 1071: 63-81. https://doi.org/10.3897/zookeys.1071.58598
Figure 6 Habitat of Ptychoptera pollux sp. nov., north Macedonia, Novo Selo village, Mavrovo lake outflow.
Figure 5 from: Keresztes L, Kappert J, Henning M, Török E (2021) Helen's twins in the Balkans: discovery of two new Paraptychoptera Tonnoir, 1919 species closely related to P. helena Peus, 1958, with systematic revision of the "lacustris" group (Diptera, Ptychopteridae). ZooKeys 1071: 63-81. https://doi.org/10.3897/zookeys.1071.58598
Figure 5 Ptychoptera pollux sp. nov. a flagellum of antennae b right wing c epandrium, dorsal d subapical lobe of epandrium, ventral e gonocoxite and gonostylus complex, dorsal f gonostylus anterior and medial lobules, caudal g hypandrium, caudal h paramere, ventral i aedeagal complex, dorsal.
Figure 7 from: Keresztes L, Kappert J, Henning M, Török E (2021) Helen's twins in the Balkans: discovery of two new Paraptychoptera Tonnoir, 1919 species closely related to P. helena Peus, 1958, with systematic revision of the "lacustris" group (Diptera, Ptychopteridae). ZooKeys 1071: 63-81. https://doi.org/10.3897/zookeys.1071.58598
Figure 7 Single most parsimonious tree (1392 steps) based on 53 morphological characters. Bootstrap (B) values over 50% are noted above the corresponding branches, respectively. Branch support was calculated by bootstrap with 10000 replicates. Character states are shown above branches.
Genome-wide DNA methylation analysis in monozygotic twins identifies potential biomarkers of fasting plasma glucose
<p><strong><span>Purpose:</span></strong><span> An epigenome-wide association study (EWAS) was conducted to detect specific epigenetic variants potentially related to fasting plasma glucose (FPG) in middle-aged and elderly Chinese monozygotic twins.</span></p> <p><span><strong>Methods:</strong> </span><span>Association between DNA methylation (DNAm) of single CpG and FPG was tested by applying generalized estimation equation in 52 twin pairs. Differentially methylated regions (DMRs) were identified by</span><em> <span>comb-P</span></em> <span>approach</span><span>. Inference about Causation through Examination of Familial Confounding (ICE FALCON) was utilized to perform the causal inference. Candidate CpGs were quantified using Sequenom MassARRAY platform in a community population. Weighted gene co-expression network analysis (WGCNA) was conducted using gene expression data. </span></p> <p><span><strong>Results</strong>: </span><span>The relationship between DNAm of 30 top CpGs and FPG reached <em>P</em>-value</span><span><</span><span>1×10<sup>-6</sup></span><span> level. Thirty-two DMRs within 24 genes, such as TLCD1, MRPS31P5, </span><span>CASZ1 </span><span>and CXADRP3, were identified. Causal relationship of 20 top CpGs within <em>TLCD1, MZF1, PTPRN2, SLC6A18, ASTN2, IQCA1, GRIN1</em>, and <em>PDE2A </em>with FPG were further identified. Pathways related to FPG such as mitogen-activated protein kinase p38 binding were found. Three CpGs mapped to <em>SLC6A18 </em>were</span><span> validated in a community population, with </span><span>a hypermethylated direction in type 2 diabetes cases. The gene expression levels of 18 genes where the top CpGs and DMRs located, such as <em>SLC6A18 </em>and <em>TLCD1</em>, were positively correlated with FPG. Besides, common biological pathways, such as dopamine binding, regulation of biosynthetic process, and neuron fate specification, were found in methylation and gene expression analyses.</span></p> <p><span><strong>Conclusion</strong>: </span><span>Our findings showed that</span> <span>multiple methylated CpGs and regions, crucial genes, and biological pathways were underlyingly associated with FPG and diabetes.</span></p>
Training Datasets for Digital Twin of Diffusion Experiments
<p>This repository contains the training datasets generated from lattice Boltzmann simulations.</p>
Data of Building information modelling (BIM), Historic BIM (HBIM), Digital Twins and IoT
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Effect of pre-twinning on deformation behavior of [0001]-textured nanocrystalline Mg: a molecular dynamics study
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Phenotypes of painful TMD in discordant monozygotic twins according to a cognitive-behavioral-emotional model: a case-control study
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TABLE 2 in A twin of Polydora hoplura (Annelida: Spionidae) from the Arabian (Persian) Gulf, with review of primers used for barcoding of Spionidae
<p><b>TABLE 2.</b> Uncorrected pairwise average genetic distances (<i>p</i>, in %) between population clades of <i>COI</i>, <i>16S</i>, <i>18S</i>, <i>28S</i> and <i>Histone 3</i> gene sequences of <i>Polydora</i> species.</p><table><tbody><tr><th><b>Group*</b></th><th><b>Species</b></th><th><b>Country</b></th><th><b>N</b></th><th></th><th></th><th></th><th></th><th></th><th></th><th></th><th></th><th></th></tr></tbody><tbody><tr><th><i>COI</i></th><td></td><td></td><td></td><td>1</td><td>2</td><td>3</td><td>5</td><td>6</td><td>9</td><td></td><td></td><td></td></tr><tr><th>1</th><td><i>P. brevipalpa</i></td><td>Russia</td><td>3</td><td><i>0.65</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>2</th><td><i>P. hoplura</i></td><td>Brazil</td><td>3</td><td><i>17.58</i></td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>3</th><td><i>P. hoplura</i></td><td>France</td><td>2</td><td>17.75</td><td>1.54</td><td><i>0.62</i></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>5</th><td><i>P. hoplura</i></td><td>South Korea</td><td>1</td><td>17.81</td><td>5.82</td><td><b>6.22</b></td><td>−</td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>6</th><td><i>P. hoplura</i></td><td>USA, California</td><td>1</td><td>17.81</td><td>5.82</td><td><b>6.22</b></td><td>0.00</td><td>−</td><td></td><td></td><td></td><td></td></tr><tr><th>9</th><td><i>P. mohammadi</i></td><td>Kuwait</td><td>10</td><td>19.10</td><td>12.26</td><td><b>12.51</b></td><td>11.77 11.77</td><td><i>1.48</i></td><td></td><td></td><td></td></tr><tr><th><i>16S</i></th><td></td><td></td><td></td><td>1</td><td>2</td><td>3</td><td>4</td><td>5</td><td>6</td><td>7</td><td>8</td><td>9</td></tr><tr><th>1</th><td><i>P. brevipalpa</i></td><td>Russia</td><td>3</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>2</th><td><i>P. hoplura</i></td><td>Brazil</td><td>5</td><td>10.16</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>3</th><td><i>P. hoplura</i></td><td>France</td><td>7</td><td>10.51</td><td>0.35</td><td><i>0.12</i></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>4</th><td><i>P. hoplura</i></td><td>France/Italy</td><td>11</td><td>10.38</td><td>0.22</td><td>0.19</td><td><i>0.22</i></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>5</th><td><i>P. hoplura</i></td><td>South Korea</td><td>16</td><td>9.98</td><td>2.67</td><td><b>3.02</b></td><td>2.89</td><td><i>0.21</i></td><td></td><td></td><td></td><td></td></tr><tr><th>6</th><td><i>P. hoplura</i></td><td>USA, California</td><td>4</td><td>10.06</td><td>2.03</td><td>2.38</td><td>2.25</td><td>0.81</td><td><i>1.49</i></td><td></td><td></td><td></td></tr><tr><th>7</th><td><i>P. lingshuiensis</i></td><td>China</td><td>5</td><td>12.60</td><td>8.54</td><td><i>8.19</i></td><td>8.31</td><td>9.42</td><td>9.23</td><td><i>0.33</i></td><td></td><td></td></tr><tr><th>8</th><td><i>P. lingulicola</i></td><td>Japan</td><td>7</td><td>12.60</td><td>13.01</td><td>13.01</td><td>13.01 14.46 14.13</td><td>14.39</td><td><i>0.00</i></td><td></td></tr><tr><th>9</th><td><i>P. mohammadi</i></td><td>Kuwait</td><td>10</td><td>10.37</td><td>4.76</td><td><b>5.10</b></td><td>4.98</td><td>4.98</td><td>4.96</td><td>10.04</td><td>14.31</td><td><i>0.53</i></td></tr><tr><th><i>18S</i></th><td></td><td></td><td></td><td>1</td><td>2</td><td>3</td><td>4</td><td>5</td><td>6</td><td>7</td><td>8</td><td>9</td></tr><tr><th>1</th><td><i>P. brevipalpa</i></td><td>Russia</td><td>3</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>2</th><td><i>P. hoplura</i></td><td>Brazil</td><td>5</td><td>1.08</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>3</th><td><i>P. hoplura</i></td><td>France</td><td>5</td><td>1.08</td><td>0.00</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>4</th><td><i>P. hoplura</i></td><td>France/Italy</td><td>4</td><td>1.08</td><td>0.00</td><td>0.00</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>5</th><td><i>P. hoplura</i></td><td>South Korea</td><td>12</td><td>1.07</td><td><b>0.02</b></td><td><b>0.02</b></td><td><b>0.02</b></td><td><i>0.03</i></td><td></td><td></td><td></td><td></td></tr><tr><th>6</th><td><i>P. hoplura</i></td><td>USA, California</td><td>3</td><td>1.08</td><td>0.00</td><td>0.00</td><td>0.00</td><td><b>0.02</b></td><td><i>0.00</i></td><td></td><td></td><td></td></tr><tr><th>7</th><td><i>P. lingshuiensis</i></td><td>China</td><td>5</td><td>1.85</td><td>1.40</td><td>1.40</td><td>1.40</td><td>1.42</td><td>1.40</td><td><i>0.00</i></td><td></td><td></td></tr><tr><th>8</th><td><i>P. lingulicola</i></td><td>Japan</td><td>7</td><td>1.21</td><td><i>0.89</i></td><td><i>0.89</i></td><td><i>0.89</i></td><td>0.91</td><td><i>0.89</i></td><td>1.59</td><td><i>0.00</i></td><td></td></tr><tr><th>9</th><td><i>P. mohammadi</i></td><td>Kuwait</td><td>4</td><td>1.02</td><td>0.06</td><td>0.06</td><td>0.06</td><td><b>0.08</b></td><td>0.06</td><td>1.47</td><td>0.96</td><td><i>0.00</i></td></tr><tr><th><i>28S</i></th><td></td><td></td><td></td><td>1</td><td>2</td><td>3</td><td>4</td><td>5</td><td>6</td><td>7</td><td>8</td><td>9</td></tr><tr><th>1</th><td><i>P. brevipalpa</i></td><td>Russia</td><td>3</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>2</th><td><i>P. hoplura</i></td><td>Brazil</td><td>5</td><td>2.63</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>3</th><td><i>P. hoplura</i></td><td>France</td><td>7</td><td>2.63</td><td>0.00</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>4</th><td><i>P. hoplura</i></td><td>France/Italy</td><td>11</td><td>2.63</td><td>0.00</td><td>0.00</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>5</th><td><i>P. hoplura</i></td><td>South Korea</td><td>15</td><td>2.66</td><td><b>0.03</b></td><td><b>0.03</b></td><td><b>0.03</b></td><td><i>0.06</i></td><td></td><td></td><td></td><td></td></tr><tr><th>6</th><td><i>P. hoplura</i></td><td>USA, California</td><td>3</td><td>2.63</td><td>0.00</td><td>0.00</td><td>0.00</td><td><b>0.03</b></td><td><i>0.00</i></td><td></td><td></td><td></td></tr><tr><th>7</th><td><i>P. lingshuiensis</i></td><td>China</td><td>5</td><td>3.51</td><td><i>0.88</i></td><td><i>0.88</i></td><td><i>0.88</i></td><td>0.91</td><td><i>0.88</i></td><td><i>0.00</i></td><td></td><td></td></tr><tr><th>8</th><td><i>P. lingulicola</i></td><td>Japan</td><td>7</td><td>3.51</td><td>1.75</td><td>1.75</td><td>1.75</td><td>1.78</td><td>1.75</td><td>2.63</td><td><i>0.00</i></td><td></td></tr><tr><th>9</th><td><i>P. mohammadi</i></td><td>Kuwait</td><td>7</td><td>2.63</td><td>0.00</td><td>0.00</td><td>0.00</td><td><b>0.03</b></td><td>0.00</td><td>0.88</td><td>1.75</td><td><i>0.00</i></td></tr><tr><th><i>H3</i></th><td></td><td></td><td></td><td>1</td><td>2</td><td>3</td><td>4</td><td>5</td><td>6</td><td>9</td><td></td><td></td></tr><tr><th>1</th><td><i>P. brevipalpa</i></td><td>Russia</td><td>3</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>2</th><td><i>P. hoplura</i></td><td>Brazil</td><td>4</td><td>12.16</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>3</th><td><i>P. hoplura</i></td><td>France</td><td>5</td><td>11.89</td><td>0.27</td><td><i>0.14</i></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>4</th><td><i>P. hoplura</i></td><td>France/Italy</td><td>6</td><td><i>11.82</i></td><td><b>0.34</b></td><td>0.07</td><td><i>0.00</i></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>5</th><td><i>P. hoplura</i></td><td>South Korea</td><td>11</td><td>11.89</td><td><b>0.34</b></td><td>0.21</td><td>0.18</td><td><i>0.32</i></td><td></td><td></td><td></td><td></td></tr><tr><th>6</th><td><i>P. hoplura</i></td><td>USA, California</td><td>4</td><td><i>11.82</i></td><td><b>0.34</b></td><td>0.07</td><td>0.00</td><td>0.18</td><td><i>0.00</i></td><td></td><td></td><td></td></tr><tr><th>9</th><td><i>P. mohammadi</i></td><td>Kuwait</td><td>3</td><td>12.39</td><td>1.46</td><td>1.73</td><td><b>1.80</b></td><td><b>1.80</b></td><td><b>1.80</b></td><td>0.23</td><td></td><td></td></tr></tbody></table>
TABLE 1 in A twin of Polydora hoplura (Annelida: Spionidae) from the Arabian (Persian) Gulf, with review of primers used for barcoding of Spionidae
<p><b>TABLE 1.</b> Taxa, sampling location data, museum registration numbers of voucher specimens and GenBank accession numbers of sequences used in the analysis.</p><table><tbody><tr><th>Group* VIR ID Species</th><th>Museum</th><th><b>Locality</b></th><th><b>GenBank accession number**, ***</b> COI 16S 18S</th><th>28S</th><th><i>Histone 3</i></th></tr></tbody><tbody><tr><th>1</th><td><b>18049</b></td><td><i>P. brevipalpa</i></td><td>MIMB 28135</td><td>Russia, Primorye, Sea of Japan, Vostok Bay</td><td><b>PP441928−30</b></td><td>OM418504−06</td><td>OM418464−66</td><td>OM418398−00</td><td>OM416709−11</td></tr><tr><th>2</th><td>19332</td><td><i>P. hoplura</i></td><td>Genbank</td><td>Brazil, São Paulo, São Sebastião, Ilhabela</td><td><b>PP441932−34</b></td><td>OM418534−36</td><td>OM418479−81</td><td>OM418427−29</td><td>OM416725−27</td></tr><tr><th>2</th><td>19334</td><td><i>P. hoplura</i></td><td>MIMB 28149</td><td>Brazil, São Paulo, São Sebastião, Ilhabela</td><td></td><td>OM418537,38</td><td>OM418482,83</td><td>OM418430,31</td><td>OM416728</td></tr><tr><th>3</th><td>18609</td><td><i>P. hoplura</i></td><td>MIMB 33031</td><td>France, Aquitaine, Bay of Biscay, Arcachon</td><td></td><td>OM418516−18</td><td>OM418471−73</td><td>OM418409−11</td><td>OM416716−18</td></tr><tr><th>3</th><td>20233</td><td><i>P. hoplura</i></td><td>MIMB 33064</td><td>France, Aquitaine, Bay of Biscay, Legallais</td><td><b>PP441937,38</b></td><td>OM418547,48</td><td>OM418489,90</td><td>OM418439,40</td><td>OM416734,35</td></tr><tr><th>3</th><td>18596</td><td><i>P. hoplura</i></td><td>MIMB 33030</td><td>France, Brittany, La Manche, Roscoff</td><td></td><td>OM418514−15</td><td></td><td>OM418407−08</td><td></td></tr><tr><th>4</th><td>18634</td><td><i>P. hoplura</i></td><td>MIMB 33033</td><td>France, Languedoc−Roussillon, Gulf of Lion, Leucate</td><td></td><td>OM418519−23</td><td>OM418474,75</td><td>OM418412−16</td><td>OM416719−21</td></tr><tr><th>4</th><td>18672</td><td><i>P. hoplura</i></td><td>MIMB 33029</td><td>Italy, Apulia, Ionian Sea, Taranto</td><td></td><td>OM418527−32</td><td></td><td>OM418420−25</td><td></td></tr><tr><th>4</th><td>18660</td><td><i>P. hoplura</i></td><td>MIMB 28148</td><td>Italy, Tyrrhenian Sea, Campania, Ischia</td><td></td><td>OM418524−26</td><td>OM418476,77</td><td>OM418417−19</td><td>OM416722,23</td></tr><tr><th>4</th><td>20313</td><td><i>P. hoplura</i></td><td>SMF 24359</td><td>Italy, Tyrrhenian Sea, Campania, Ischia</td><td></td><td>OM418553</td><td></td><td>OM418445</td><td>OM416736</td></tr><tr><th>5</th><td>18019</td><td><i>P. hoplura</i></td><td>MIMB 33035</td><td>South Korea, East Sea, Bogyl</td><td></td><td>OM418496−99</td><td>OM418457−59</td><td>OM418390−93</td><td>OM416703−05</td></tr><tr><th>5</th><td>20000</td><td><i>P. hoplura</i></td><td>MIMB 33056</td><td>South Korea, East Sea, Geoje Is.</td><td><b>PP441936</b></td><td>OM418546</td><td>OM418488</td><td>OM418438</td><td>OM416733</td></tr><tr><th>5</th><td>18246</td><td><i>P. hoplura</i></td><td>MIMB 33041</td><td>South Korea, East Sea, Geoje Is.</td><td></td><td>OM418507−09</td><td></td><td>OM418401,02</td><td></td></tr><tr><th>5</th><td>18032</td><td><i>P. hoplura</i></td><td>MIMB 33036</td><td>South Korea, East Sea, Keumil</td><td></td><td>OM418500−03</td><td>OM418460−63</td><td>OM418394−97</td><td>OM416706−08</td></tr><tr><th>5</th><td>18283</td><td><i>P. hoplura</i></td><td>MIMB 33038</td><td>South Korea, East Sea, Seohwa</td><td></td><td>OM418511−13</td><td>OM418468−70</td><td>OM418404−06</td><td>OM416713−15</td></tr><tr><th>5</th><td>18277</td><td><i>P. hoplura</i></td><td>MIMB 33040</td><td>South Korea, East Sea, Yeosu</td><td></td><td>OM418510</td><td>OM418467</td><td>OM418403</td><td>OM416712</td></tr><tr><th>6</th><td>20710</td><td><i>P. hoplura</i></td><td>MIMB 39108</td><td>USA, California, Los Angeles</td><td></td><td>OM418554,55</td><td>OM418491</td><td>OM418446</td><td>OM416737,38</td></tr><tr><th>6</th><td>20715</td><td><i>P. hoplura</i></td><td>MIMB 39109</td><td>USA, California, Los Angeles</td><td><b>PP441941</b></td><td>OM418556,57</td><td>OM418492,93</td><td>OM418447,48</td><td>OM416739,40</td></tr><tr><th>7</th><td>23931</td><td><i>P.</i></td><td>Genbank</td><td>China, Hainan, Hainan Is., Xincun Bay</td><td></td><td>KF562230,32</td><td>KF562236,37</td><td>KF562243,46</td><td></td></tr><tr><th></th><td></td><td><i>lingshuiensis</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>7</th><td>23932</td><td><i>P.</i></td><td>Genbank</td><td>China, Hainan, Hainan Is., Xincun Bay</td><td></td><td>KF562229,31,33</td><td>KF562238−40</td><td>KF562244,45,47</td><td></td></tr><tr><th></th><td></td><td><i>lingshuiensis</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>8</th><td>24908</td><td><i>P. lingulicola</i></td><td>Genbank</td><td>Japan, Kumamoto, Kyushu Is., Ariake Sea</td><td></td><td>LC500924−30</td><td>LC500909−15</td><td>LC500916−22</td><td></td></tr><tr><th>9</th><td>18814</td><td><i>P. mohammadi</i></td><td>MIMB 33067</td><td>Kuwait, Arabian Gulf, Al-Judailiat</td><td>PP441931</td><td>OM418533</td><td>OM418478</td><td>OM418426</td><td><b>OM416724</b></td></tr><tr><th>9</th><td>19861</td><td><i>P. mohammadi</i></td><td>MIMB 33068</td><td>Kuwait, Arabian Gulf, Auhah Is.</td><td>PP441935</td><td>OM418545</td><td>OM418487</td><td>OM418437</td><td><b>OM416732</b></td></tr><tr><th>9</th><td>20309</td><td><i>P. mohammadi</i></td><td>MIMB 42694</td><td>Kuwait, Arabian Gulf, Ras Ajuza</td><td>PP441939,40</td><td>OM418549−52</td><td></td><td><b>OM418441−44</b></td><td></td></tr><tr><th>9</th><td>24102</td><td><i>P. mohammadi</i></td><td>MIMB 42696</td><td>Kuwait, Arabian Gulf, Failaka Is.</td><td>PP441942-45</td><td><b>PP444465,66</b></td><td></td><td></td><td></td></tr><tr><th>9</th><td>25282</td><td><i>P. mohammadi</i></td><td>MIMB 42697</td><td>Kuwait, Arabian Gulf, Failaka Is.</td><td>PP441946</td><td>OM418559</td><td>OM418495</td><td>OM418449</td><td><b>OM416741</b></td></tr><tr><th>9</th><td>25283</td><td><i>P. mohammadi</i></td><td>MIMB 42698</td><td>Kuwait, Arabian Gulf, Failaka Is.</td><td>PP441947</td><td>OM418558</td><td><b>OM418494</b></td><td></td><td></td></tr></tbody></table>
Long-term development of lens fluorescence in a twin cohort: Heritability and effects of age and lifestyle
<p><b>Background</b>: The blue-green autofluorescence of the ocular lens increases with age, glycemia and smoking, as the irreplaceable structural proteins of the lens slowly accumulate damage from the encounter with reactive molecular species. We have conducted a prospective study of lens autofluorescence over two decades in a twin cohort.</p> <p><b>Methods</b>: The study included 131 phakic, non-diabetic adult twins (median age at follow-up 58 years, range 41-66 years) who were examined twice at an interval of 21 years. Change in anterior lens peak autofluorescence was analyzed in relation to age, current and baseline glycemia, cumulative smoking and heritability.</p> <p><strong>Results</strong>: The level of lens autofluorescence in the study population increased as a function of age and smoking (p ≤.002), but not as a function of glycemia (p ≥.069). Lens autofluorescence remained a highly heritable trait (90.6 % at baseline and 93.3 % at follow-up), but whereas the combined effect of age and cumulative smoking explained 57.2 % of the variance in lens autofluorescence at baseline in mid-life, it only accounted for 31.6 % at follow-up 21 years later.</p> <p><b>Conclusion</b>: From mid to late adulthood, the level of blue-green fluoescence remained overwhelmingly heritable, but became less predictable from age, smoking habits and glycemic status. Presumably, as the lens ages, its intrinsic characteristics come to dominate over environmental and systemic factors, perhaps in a prelude to the development of cataract.</p>
Lens fluorescence and skin fluorescence in the Copenhagen Twin Cohort Eye Study: Covariates and heritability
<p>Lens and skin fluorescence are related to the systemic accumulation of advanced glycation end products, which is accelerated in diabetes. We have examined lens fluorescence and skin fluorescence in healthy adult twins. The study enrolled twins aged median 59 years from a national population-based registry. Diabetic individuals were excluded from analysis. The interrelatedness between fluorescence parameters and relations between fluorescence and age, current HbA<sub>1c</sub> and smoking pack years were examined using correlation tests and mixed model linear regression analyses. Broad-sense heritability was analyzed and compared for lens fluorescence, skin fluorescence and HbA<sub>1c</sub>. Lens fluorescence and skin fluorescence were crudely interrelated (R = 0.38). In linear regression analyses, age explained a larger fraction of the variance in lens fluorescence (R<sup>2</sup> = 32 %) than in skin fluorescence (R<sup>2</sup> = 20 %), whereas HbA<sub>1c</sub> explained smaller variance fractions (R<sup>2</sup> = 3 % and 8 %, respectively) followed by smoking pack years (4 % and 3 %, respectively). In multivariate analyses, age, HbA<sub>1c</sub> and smoking pack years combined explained more of the variance in lens fluorescence (R<sup>2</sup> = 35 %) than in skin fluorescence (R<sup>2</sup> = 21 %), but the influence of HbA<sub>1c</sub> on lens fluorescence was not statistically significant (p = .2). Age-adjusted broad-sense heritability was 85 % for lens fluorescence, 53 % for skin fluorescence and 71 % for HbA<sub>1c </sub>in best fitting heritability models. Both fluorescence parameters increased with age, current glycemia and cumulative smoking. Lens fluorescence was found to be a predominantly heritable trait, whereas skin fluorescence was more influenced by environmental factors and closer related to current glycemia. The results suggest that skin fluorophores have a faster turn-over than lens fluorophores.</p>
Dependence of twinning and slipping
<p>magnesium alloy</p>
Tuning adatom mobility and nanoscale segregation by twin formation and polytypism
<p>Nanoscale variations in the composition of an AlxGa1−xAs shell around a GaAs nanowire affect the nanowire<br> functionality and can lead to the formation of localized quantum emitters. These composition<br> fluctuations can be the consequence of variations of crystal phase and/or nanoscale adatom<br> mobility.By applying electron microscopy related techniques we correlate the optical,<br> compositional and structural properties at the nanoscale on the same object. The results indicate a<br> clear correlation between the twin density in the nanowire and the quantum-emitter density as<br> well as a significant redshift in the emission. We propose that twinning increases nanoscale<br> segregation effects in ternary alloys. An additional redshift in the emission can be explained by<br> the staggered band-alignment between wurtzite and zinc-blende phases. This work opens new<br> avenues in the achievement of homogeneous ternary and quaternary alloys in nanowires and in<br> the engineering of the segregation effects at the nanoscale.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.