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4,276
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ShareScore release 0.9.0
Dataset results
4,276 results for “transcription factors”
The APETALA2-like transcription factor SUPERNUMERARY BRACT controls rice seed shattering and seed size
GEO Series GSE116422. Oryza sativa Indica Group. 6 samples. Type: Expression profiling by high throughput sequencing.
Binding specificities of transcription factors of the oomycete Phytophthorainfestans reflect conserved and divergent evolutionary patterns and function
GEO Series GSE270411. Phytophthora infestans; synthetic construct. 146 samples. Type: Other.
Transcription factor CrzA modulate fungal development and cellulolytic gene expression in Penicillium oxalicum
GEO Series GSE175771. Penicillium oxalicum. 9 samples. Type: Expression profiling by high throughput sequencing.
Chromatin immunoprecipitation of MADS29 to find the cis regulatory regions and targets of this transcription factor
GEO Series GSE42201. Oryza sativa. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The transcription factor Oct6 promotes the dissolution of the naïve pluripotent state by repressing Nanog and activating a formative state gene regulatory network.
GEO Series GSE237157. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Homo- and heterodimerization of bHLH transcription factors balance stemness and bipotential differentiation in the Drosophila adult intestine
GEO Series GSE234019. Drosophila melanogaster. 17 samples. Type: Expression profiling by high throughput sequencing.
Gene expression of human hematopoietic stem cells (CD34+) stimulated with native & mutant (244) form of myeloid stem-cell transcription factor PU.1 alone & in combination with myeloid specific cytokin
GEO Series GSE108720. Homo sapiens. 18 samples. Type: Expression profiling by array.
The transcription factor BCL6 controls early development of innate-like T cells (RNA-seq)
GEO Series GSE134211. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
QBiC-Pred: Quantitative Predictions of Transcription Factor Binding Changes Due to Sequence Variants V
GEO Series GSE130835. synthetic construct; Mus musculus. 1 samples. Type: Other.
Assessing the effects of transcription factor knockouts on growth in high-density fed-batch cultures
GEO Series GSE221706. Escherichia coli str. K-12 substr. MG1655; Escherichia coli BW25113. 122 samples. Type: Expression profiling by high throughput sequencing.
A single transcriptional factor Csa3b regulates CRISPR-Cas adaptation and interference in Sulfolobus
GEO Series GSE125156. Saccharolobus islandicus REY15A. 4 samples. Type: Expression profiling by high throughput sequencing.
Enhancers display sequence flexibility constrained by transcription factor motif syntax [Drosophila motif pasting STARR-seq]
GEO Series GSE211654. Drosophila melanogaster. 6 samples. Type: Other.
The transcription factor OsWRKY36 regulates lamina joint development and the leaf angle in rice by modulating brassinosteroid signalling [DAP-seq]
GEO Series GSE310494. Oryza sativa. 3 samples. Type: Other.
The zinc cluster transcription factor Rha1 is a positive filamentation regulator in Candida albicans
GEO Series GSE143825. Candida albicans. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide off-rates reveal how DNA binding dynamics shape transcription factor function [ChIP-Seq]
GEO Series GSE151692. Saccharomyces cerevisiae. 76 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Binding site identification for the Epstein-Barr virus transcription factor Zta in epithelial cells
GEO Series GSE83354. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A single cell-based computational platform to identify chemical compounds targeting desired sets of transcription factors for cellular conversion [Single-cell RNA-seq]
GEO Series GSE162909. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Genome wide screen reveals WNT11, a noncanonical WNT gene, as a target of ETS transcription factor ERG
GEO Series GSE21495. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Data from: The FlbA-regulated predicted transcription factor rpnR of Aspergillus niger is involved in stress resistance and protein secretion, in Regulators Controlled by the Sporulation Gene flbA of Aspergillus niger (Ph.D. thesis)
Proteins are secreted throughout the mycelium of Aspergillus niger except for the sporulating zone. A link between sporulation and repression of protein secretion was underlined by the finding that inactivation of the sporulation gene flbA results in colonies that secrete proteins throughout the colony. This finding is of interest to improve fungi as a cell factory. However, ΔflbA hyphae also lyse and have thinner cell walls. This pleiotropic phenotype is associated with differential expression of 36 transcription factor genes, of which rpnR was inactivated in this study. Sporulation, biomass, and secretome complexity were not affected in strain ΔrpnR. In contrast, ΔrpnR showed decreased resistance to H2O2 and the proteotoxic stress-inducing agent dithiothreitol. This was associated with reduced ribosomal subunit expression and reduced levels of proteins secreted into the medium. Taken together, RpnR of A. niger is involved in protein synthesis and proteotoxic stress resistance and is thus an interesting target for improving enzyme production capacity.
Study 2- RNA-seq of male KOLF2.2J hiPSC-derived trophoblast cell lines homozygous null for seven different transcription factors
GEO Series GSE288289. Homo sapiens. 82 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.