Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
8,998
datasets available to search
ShareScore release 0.7.1
Dataset results
8,998 results for “Adaptation”
Projection of temperature-related mortality in 854 European cities under climate change and adaptation scenarios
<p>This repository contains the data and results from the paper <strong>Estimating future heat-related and cold-related mortality under climate change, demographic and adaptation scenarios in 854 European cities</strong> published in <em>Nature Medicine</em> (<a href="https://doi.org/10.1038/s41591-024-03452-2">https://doi.org/10.1038/s41591-024-03452-2</a>).</p> <p>It provides projections of excess death rates and burden for the period 2015-2099 for five age groups in 854 cities across 30 countries, under three Shared Socioeconomic Pathway (SSP) scenarios, and four adaptation scenarios. The results include point estimates for five-year periods and four global warming levels, along with 95% empirical confidence intervals. </p> <p>The fully reproducible analysis code using the data and producing the results included in this repository is provided in <a href="https://github.com/PierreMasselot/EUcityProj" target="_blank" rel="noopener">GitHub</a>. The results can be visualised and explored in a dedicated <a href="https://ehm-lab.shinyapps.io/vistemphip/">Shiny app</a>.</p> <h3>Content</h3> <p>This repository contains three zip files, each with an internal codebook:</p> <ul> <li><em>data.zip</em>: contains the input data necessary to run the analysis. It includes historical and projected daily temperature at the city level, age-group specific projections of population and survival rates at the country level, and exposure-response functions extracted from another Zenodo repository (<a href="https://doi.org/10.5281/zenodo.10288665" target="_blank" rel="noopener">https://doi.org/10.5281/zenodo.10288665</a>). This file also include a script showing how each dataset was extracted for the purpose of this projection study.</li> <li><em>results_csv.zip</em>: contains the full results from the health impact projections. It includes one file for each combination of geographical level (city, country, region or European wide) and scale of reporting (five year periods or global warming levels). </li> <li><em>results_parquet.zip</em>: contains the same information as the <em>results_csv.zip</em> but in a parquet format. This allows for more efficient storage and data reading.</li> </ul> <p>It is recommended to only download <em>results_csv.zip</em> for a quick exploration of the results, or only <em>results_parquet.zip</em> when the results are to be loaded into a software for deeper analysis.</p> <p> </p>
Topography drives microgeographic adaptations of closely-related species in two tropical tree species complexes
<p>Combining LiDAR-derived topography, tree inventories, and single nucleotide polymorphisms (SNPs) from gene capture experiments, we explored genome-wide population genetic structure, covariation of environmental variables, and genotype-environment association to assess microgeographic adaptations to topography within the species complexes <em>Symphonia</em> (Clusiaceae), and <em>Eschweilera</em> (Lecythidaceae) with three species per complex and 385 and 257 individuals genotyped, respectively.</p>
Cultural heritage adaptive reuse in Salerno: challenges and solutions. Dataset
<p>Dataset analysed in Pintossi, N., Ikiz Kaya, D., Pereira Roders, A. (2023). Cultural heritage adaptive reuse in Salerno: Challenges and solutions. City, Culture and Society, 100505. https://doi.org/10.1016/j.ccs.2023.100505</p> <ul> <li>Date of data collection: 27/11/2018</li> <li>Geographic location of data collection: Salerno, Italy. The venue of the data collection is <em>Salone dei marmi, Palazzo di Città</em>, via Roma, 84121 Salerno, Italy </li> <li>Activity of data collection: Historic Urban Landscape workshop 2 - Salerno. Held in Salerno, Italy, on 26-27/11/2018</li> <li>Aim of data collection: Multi-scale, participatory identification of challenges entailed in the adaptive reuse of cultural heritage and solutions </li> <li>Methods for collection/generation of data: see the methodology section in Pintossi, N., Ikiz Kaya, D., Pereira Roders, A. (2023). Cultural heritage adaptive reuse in Salerno: Challenges and solutions. City, Culture and Society, 100505. https://doi.org/10.1016/j.ccs.2023.100505</li> <li>Researchers facilitating roundtable discussion and writing down paper version of data: Marco Acri, Gaia Daldanise, Gamze Dane, Cristina Garzillo, Antonia Gravagnuolo, Lu Lu, Nadia Pintossi, and Ruba Saleh</li> <li>Researcher translating to English, transcribing data in the digital tabular dataset, and cleaning the data: Nadia Pintossi</li> <li>Original language of the data: English, Italian, and mix of English and Italian</li> </ul>
Trajectory-Aware Rate Adaptation for Aerial Networks Simulation Results
<p><strong>Introduction</strong></p> <p>Even though the concept of ubiquitous wireless connectivity is becoming a reality, there are scenarios where wireless communications coverage is insufficient or does not exist. Considering natural and man-made disaster scenarios, communications infrastructures may be damaged and become unavailable. In temporary crowded events, the existing infrastructure may not have been designed to cope with the additional traffic demand, resulting in overload. In maritime scenarios, environmental monitoring activities using autonomous vehicles will take place in offshore zones, typically not in range of existing onshore communications infrastructures.</p> <p>Flying networks, composed of Unmanned Aerial Vehicles (UAV), are emerging as a flexible and cost-effective solution to provide on-demand wireless connectivity in such scenarios. UAVs have the possibility to operate virtually everywhere, and the growing payload capacity makes them suitable platforms to carry wireless communications hardware, playing the role of mobile base stations, access points or relay nodes. A flying network may typically be composed of a fleet of UAVs, organized in a multi-tier topology with so-called Flying Edge Nodes (FENs) and Flying Gateways (FGWs) <a href="https://doi.org/10.1016/j.adhoc.2022.103000">[1]</a>. FENs can play the role of Flying Access Points that provide the access network to the users on the ground, or the role of Flying Sensor Nodes that can perform video surveillance missions. The FENs forward the traffic to the FGWs, that act as relay nodes and are responsible for forwarding the traffic to/from the backhaul (BKH) network and ultimately to/from the Internet.</p> <p>The flying network concept brings up new challenges. The flying nodes need to be properly positioned and their wireless link configuration dynamically adjusted in order to ensure the Quality of Service (QoS) expected by the end users. In addition, these scenarios are typically highly unpredictable due to the varying locations as well as the concentration/dispersion of end-users and their movements regarding direction and velocity - e.g., vehicles or pedestrians. Therefore, a static wireless link configuration and UAV positioning are not adequate. State of the art work has been mainly focused on the optimal positioning of the flying nodes, having most of the wireless link parameters statically configured with default values. The Rate Adaptation challenge is well-known in fixed or low mobility IEEE 802.11 networks, and Minstrel High Throughput (HT) <a href="https://lwn.net/Articles/376765">[2]</a> is the default Wi-Fi rate adaptation algorithm used in the Linux kernel since the IEEE 802.11n version. However, few works propose solutions designed to consider the characteristics of other communications environments, such as flying and vehicular networks <a href="https://doi.org/10.1007/s11276-020-02295-2">[3]</a>. To the best of our knowledge, solutions that use the node trajectory information to predict the wireless channel conditions and perform rate adaptation are yet to be developed.</p> <p>The main contribution of this paper is the Trajectory-Aware Rate Adaptation (TARA) algorithm. TARA takes advantage of knowing the trajectory of all nodes in the flying network to estimate future changes in the wireless link quality and perform rate adaptation accordingly. The network performance improvement achieved with TARA was evaluated using ns-3 <a href="https://doi.org/10.1007/978-3-642-12331-3_2">[4]</a>. The simulation results presented in this dataset show significant throughput gains when compared with conventional rate adaptation algorithms.</p> <p><strong>Folder Organization</strong></p> <p>The following dataset presents the results of the TARA Paper, organized in different folders for each Rate Adaptation Algorithm, as well as the random seeds that were used to obtain such results:</p> <p><strong>Naming Convention:</strong></p> <ul> <li>Rate Adaptation Algorithm<strong> </strong> <ul> <li><strong>tara </strong>– Trajectory-Aware Rate Adaptation</li> <li><strong>min </strong>– MinstrelHTWifiManager</li> <li><strong>id </strong>– IdealWifiManager</li> </ul> </li> </ul> <p><strong>Folder Content: </strong></p> <ul> <li><em>distances.csv - </em><strong>Distances between nodes</strong> <ul> <li>Column 1 – <strong>Simulation Time </strong>(seconds)</li> <li>Column 2 – <strong>Distance between BKH and FGW</strong> (meters)</li> <li>Column 3 – <strong>Distance between FEN and FGW </strong>(meters)</li> </ul> </li> <li><em>positions.csv</em> <em>- </em><strong>Current 3D position of nodes</strong> <ul> <li>Column 1 – <strong>Simulation Time </strong>(seconds)</li> <li>Column 2 – <strong>BKH x </strong>(meters)</li> <li>Column 3 – <strong>BKH y </strong>(meters)</li> <li>Column 4 – <strong>BKH z </strong>(meters)</li> <li>Column 5 – <strong>FEN x </strong>(meters)</li> <li>Column 6 – <strong>FEN y </strong>(meters)</li> <li>Column 7 – <strong>FEN z </strong>(meters)</li> <li>Column 8 – <strong>FGW x </strong>(meters)</li> <li>Column 9 – <strong>FGW y </strong>(meters)</li> <li>Column 10 – <strong>FGW z </strong>(meters)</li> </ul> </li> <li><em>throughput.csv</em> - <strong>Link Specific Throughput, at MAC layer level</strong> <ul> <li>Column 1 – <strong>Simulation Time </strong>(seconds)</li> <li>Column 2 – <strong>Relay Link (BKH - FGW), Throughput measured in BKH </strong>(Mbit/second)</li> <li>Column 3 – <strong>Access Link (FEN - FGW), Throughput measured in FEN </strong>(Mbit/second)</li> <li>Column 4 – <strong>Relay Link (BKH - FGW), Throughput measured in FGW </strong>(Mbit/second)</li> <li>Column 5 – <strong>Access Link (FEN - FGW), Throughput measured in FGW </strong>(Mbit/second)</li> </ul> </li> </ul>
Data for: Adaptive P300-Based Brain-Computer Interface for Attention Training
<p>The dataset contains EEG and behavioral data of 47 participants who completed 9 runs (i.e. copy-spelled 9 words) in a P300 speller task, as well as a random dot motion (RDM) task and questionnaires in a single experimental session. Details of the experimental protocol can be found here:</p> <p>Noble SC, Woods E, Ward T, Ringwood JV. “Adaptive P300-Based Brain-Computer Interface for Attention Training: Protocol for a Randomized Controlled Trial.” <em>JMIR Res Protoc</em> 2023, 12:e46135, doi: <a href="https://doi.org/10.2196/46135">10.2196/46135</a></p> <p>A journal article describing the results of the study can be found here:<br><br>Noble SC, Woods E, Ward T, Ringwood JV. “Accelerating P300-Based Neurofeedback Training for Attention Enhancement Using Iterative Learning Control: A Randomised Controlled Trial.” <em>J Neural Eng</em> 2024, 21(2), doi: <a href="https://doi.org/10.1088/1741-2552/ad2c9e" target="_blank" rel="noopener">10.1088/1741-2552/ad2c9e</a></p> <p>Please cite the results paper when using the data.</p> <p>Each participant folder contains:</p> <ul> <li>[xxx]-raw.[xxx] – unprocessed EEG signals (<strong>in</strong> <strong>mV</strong>) from 32 electrodes for all 9 P300 speller runs in Openvibe (.ov) and Matlab (.mat) file formats, see details of the runs below</li> <li>[xxx]-processed.[xxx] – contains 3 xDAWN components extracted by the xDAWN spatial filter according to the weights in “spatial-filter.cfg”</li> <li>classifier.cfg - LDA classifier weights</li> <li>spatial-filter.cfg - xDAWN spatial filter weights</li> <li>log.txt - contains the group assignment, start and end time of the experiment, and performance in the P300 speller and RDM tasks</li> </ul> <p>The file “Subject Information.csv” contains the age and gender of all participants.</p> <p>The file “Questionnaire scores.csv” contains the responses to the questionnaire described in the experimental protocol and the NASA Task Load Index (TLX) for all participants.</p> <p>The .ov and .mat files contain data from the following runs:</p> <table> <tbody> <tr> <th>Filename</th> <th>Word to be copy-spelled</th> <th>Number of flashes per row and column</th> <th>Feedback given to participant</th> </tr> </tbody> <tbody> <tr> <td>calibration-signal1</td> <td>THE</td> <td>12</td> <td>no</td> </tr> <tr> <td>calibration-signal2</td> <td>QUICK</td> <td>12</td> <td>no</td> </tr> <tr> <td>calibration-signals</td> <td>Concatenation of calibration-signal1 and calibration-signal2</td> </tr> <tr> <td>eval</td> <td>DOG</td> <td>12</td> <td>yes</td> </tr> <tr> <td>training-run-1</td> <td>BEAUTIFUL</td> <td>10</td> <td>yes</td> </tr> <tr> <td>training-run-2 to training-run-5</td> <td>BEAUTIFUL</td> <td>varying</td> <td>yes</td> </tr> <tr> <td>post-training-run</td> <td>DANCE</td> <td>12</td> <td>yes</td> </tr> </tbody> </table> <p> </p> <p>This research is supported by the Irish Research Council under project ID GOIPG/2020/692 and Science Foundation Ireland under grant number 12/RC/2289_P2.</p>
Simulation results of adaptive multicast streaming for videoconferences in software-defined networks
<p>Real-time applications, such as video conferences, have strong Quality of Service requirements for ensuring a decent Quality of Experience. Nowadays, most of these conferences are performed over wireless devices. Thus, an appropriate management of both heterogeneous mobile devices and network dynamics is necessary. Software Defined Networking enables the use of multicasting and stream layering inside the network nodes, two techniques able to enhance the quality of live video streams. In this paper, we propose two algorithms for building and maintaining multicast sessions in a software-defined network. The first algorithm sets up the initial multicast trees for a given call. It optimally places the stream layer adaptation function inside the core network in order to minimize the bandwidth consumption. This algorithm has two versions: the first one, based on shortest path trees is minimizing the latency, while the second one, based on spanning trees is minimizing the bandwidth consumption. The second algorithm adapts the multicast trees according to the network changes occurring during a call. It does not recompute the trees, but only relocates the stream layer adaptation functions. It requires very low computation at the controller, thus making our proposal fast and highly reactive. Extensive simulation results confirm the efficiency of our solution in terms of processing time and bandwidth savings compared to existing solutions such as multiple unicast connections, Multipoint Control Unit solutions and application layer multicast.</p>
Underwater surveys of mullet schools (Mugil liza) with Adaptive Resolution Imaging Sonar
<p>This dataset is part of a research project that employs deep learning, with a density-based regression approach, to count fish in low-resolution sonar images (Tarling et al. preprint arXiv DOI: http://arxiv.org/abs/2104.14964).</p> <p>In this repository, we provide data from sonar-based underwater videos of schools of migratory mullets (<em>Mugil liza</em>) recorded at the Tesoura beach (28.495775 S, 48.759996 W), a 100-meter long beach at the inlet canal connecting the Laguna lagoon system to the Atlantic Ocean, in southern Brazil. Since the water transparency at the lagoon canal is very low (from 0.3 to 1.5m visibility; collected <em>in situ</em> with a Secchi disk), mullet schools were recorded by deploying an Adaptive Resolution Imaging Sonar, ARIS 3000 (Sound Metrics Corp, WA, USA), which uses 128 beams to project a wedge-shaped volume of acoustic energy and convert their returning echoes into a digital overhead view of the mullet schools.</p> <p>This dataset contains 500 fully annotated images that were manually marked for the location and abundance of mullet fish, and 126 raw sonar video files, representing over 100k images. The files are organized as follows:</p> <p>1) "2018-MM-DD_HHMMSS" files are mp4 videos (you may need to add the file extension ".mp4"): There are 126 ARIS files converted into MP4 videos totalling over 789MB of underwater footage captured at 3 frames/seconds. Note that file names indicate the date and time the video was recorded.</p> <p>2) ".npy" files (in Labelled_data.zip): From the video files, 500 images were selected for labelling. Images (x) were cropped to represent a 4x8.5m<sup>2</sup> area and resized to 320 x 576 pixels. Mullet fish were marked with a point annotation. Corresponding ground truth density maps (y) were generated by convolving a Gaussian kernel over the image mask, size =4 and standard deviation = 1. The labelled dataset was randomly split into a holdout partition of 350 training images, 70 validation, and 80 test. </p> <p>3) ".csv" files: log of frames selected for the labelled subset of data</p> <p>4) ".h5" file: pre-trained weights for our multi-task with uncertainty regularisation network</p> <p>To advance the development of these machine learning tools, we also make our code openly available (https://github.com/ptarling/DeepLearningFishCounting).</p>
What the heart wants: adaptive significance of cordate leaf morphology in Arnica (Asteraceae)
We studied how the leaf inclination of basal leaves of two species, heartleaf arnica (Arnica cordifolia Hook.) and broadleaf arnica (Arnica latifolia Bong.) varied with canopy cover in the Greater Yellowstone Ecosystem, Wyoming, USA in July and August, 2022. Basal leaves of heartleaf arnica possess cordate leaf bases while those of broadleaf arnica do not, leading to potential biomechanical limitations of the latter to persist in shaded forest understories. Leaf inclination was measured as the angle (degrees) between the petiole and leaf planes of basal leaves for each species; cordateness was measured as the ratio of leaf length on either side of the petiole insertion point in basal leaves of heartleaf arnica. Data collection are complete.
Contrasting plant adaptation strategies to latitude in the native and invasive range of Spartina alterniflora: geographic survey (2014) and Common garden (2015-2017)
We examined trait differences and evolution across geographic clines among continents of the intertidal grass Spartina alterniflora within its invasive and native ranges. Between September and November 2014, we sampled vegetative and reproductive traits in the field at 20 sites over 20° latitude in China (invasive range) and 28 sites over 17° latitude in the US (native range). We grew both Chinese and US plants in a greenhouse common garden for three years (2015 - 2017) to determine if differences in performance of S. alterniflora between the introduced and native ranges were due to genetic differences or differences in abiotic conditions.
Adaptive memory distortions are predicted by feature representations in parietal cortex
Open the record for dataset details and reuse information.
Adaptive Nonlinear Control For Perching of a Bioinspired Ornithopter
<p>This dataset contains the flight data recorded by the onboard flight computer for perching experiments. During the experiments nonlinear guidance and control laws are used for trajectory tracking. The filght computer is designed around the NanoPi Neo Air. A custom made PCB attached to the NanoPi, and acts as a carrier for an STM32 microcontroller. The microcontroller regulates the servos via a PWM signal. At the same time, the flight computer connects with an Optitrack motion capture system. The Optitrack emits data at 120 Hz to a local network using a VRPN protocol. This data is recorded by the flight computer, used for state estimation, and the control is executed at 100 Hz.</p>
AgMIP-Wheat multi-model ensemble simulations on climate change impact and adaptation for 60 representative global locations
<p>This is model output from the Agricultural Model Intercomparison and Improvement Project for wheat (AgMIP-Wheat) dataset of multi-model ensemble simulations for 60 representative global locations under different climate scenarios.</p> <p>The data have been generated following the modeling protocol of Asseng et al. (2019) and Liu et al. (2019).</p> <p>References</p> <p>Asseng, S. et al. (2019). Climate change impact and adaptation for wheat protein. Glob Chang Biol 25, 155-173, doi:10.1111/gcb.14481</p> <p>Liu, B. et al. (2019). Global wheat production with 1.5 and 2.0°C above pre-industrial warming. Global Change Biol 25, 1428-1444, doi:10.1111/gcb.14542</p> <p> </p>
Local adaptation to light in Norway spruce
<p>Exome capture data of the 1654 trees involved in the study of local adaptation to light quality in Norway spruce:</p> <p>1. control_genes.vcf - Raw vcf file of the ten control genes that were not differentially expressed genes in response to SHADE (low R:FR light), between the southern and northern natural populations of Norway spruce in Sweden.</p> <p>2. degs.vcf - Raw vcf file of the 54 differentially expressed genes in response to SHADE (low R:FR light), between the southern and northern natural populations of Norway spruce in Sweden, that showed at least one missense SNP in coding region. Missense variations in coding regions of nine candidate genes followed a latitudinal cline in allele and genotype frequencies.</p>
Questionnaire data to research small-scale farmers' information sharing for adapting to climate change in Mozambique (2019-2020)
<p>Data collected from individual questionnaires with local communities of 4 districts of Mozambique in November 2019 and July 2020. It contains as well data from nine individual questionnaires to institutions (government and NGOs) working with local communities for their development.</p> <p>Data are replies from interviews containing open and closed questions about a) climate change adaptation options necessary for Mozambican small scale farmers, about b) the most used and preferred information sources of farmers, about c) the main barriers for a better exchange of information, and about d) proposals for improving it. The questionnaire can be consulted in Appendix A (in English and Portuguese). The open questions had the purpose to understand the causes and explanations about the themes presented. The closed questions followed a 0-5 likert scale approach, where 5 meant a very important factor and 0 non important one. This format was pursued for developing statistical analysis and comparison between the different types of participants. We used the same questions and format for interviewing farmers and stakeholders, although the questionnaire for farmers included also personal aspects like gender, age, and education.</p>
Resilient farm demographics withstand, adapt, or transform in the face of competitive pressure, technological change, and the expected lifestyles of future generations
<p>Farm demographics has been recognized as an important driver of structural change in European agriculture. Focus groups and computer simulations on farm demographic change were used to better understand its role for the case study regions of the Altmark in the eastern part of Germany and Flanders in the northern part of Belgium. According to these analyses, many potential agricultural entrants are deterred by what they view as a poor quality of life that farming offers. This applies to farm successors as well as hired workers. For higher attractiveness of agriculture, policy objectives should address the social image of farming as well as revitalize rural areas. Increasingly critical is the demand for skilled hired labour. However, policies dealing with farm demographic change ignore these needs and focus almost exclusively on farm succession. Particularly, the direct payment system, including additional support for small farms and young farmers, must be re-evaluated for its effectiveness. The analyses provide evidence that this system constrains European agricultural development more than assists it; ultimately preventing farms from adapting and transforming.</p>
Semantic Annotation for Tabular Data with DBpedia: Adapted SemTab 2019 with DBpedia 2016-10
<p>Semantic Annotation for Tabular Data with DBpedia: Adapted SemTab 2019 with DBpedia 2016-10</p> <p>Github: https://github.com/phucty/mtab4dbpedia<br> ---------------------------------------------------------------------------------------------------------------------------------------</p> <p>CEA: </p> <ul> <li> <p>Keep only valid entities in DBpedia 2016-10</p> </li> <li> <p>Resolve percentage encoding</p> </li> <li> <p>Add missing redirect entities</p> </li> </ul> <p>CTA: </p> <ul> <li> <p>Keep only valid types</p> </li> <li> <p>Resolve transitive types (parents and equivalent types of the specific type) with DBpedia ontology 2016-10</p> </li> </ul> <p>CPA:</p> <ul> <li> <p>Add equivalent properties</p> </li> </ul> <p>Statistic of Adapted Tabular data SemTab 2019</p> <pre><code>| | CEA | | | CPA | | | CTA | | | |---------|:--------:|:-------:|:------:|:--------:|:-------:|:------:|:--------:|---------|--------| | | Orginal | Adapted | Change | Orginal | Adapted | Change | Orginal | Adapted | Change | | Round 1 | 8418 | 8406 | -0.14% | 116 | 116 | 0.00% | 120 | 120 | 0.00% | | Round 2 | 463796 | 457567 | -1.34% | 6762 | 6762 | 0.00% | 14780 | 14333 | -3.02% | | Round 3 | 406827 | 406820 | 0.00% | 7575 | 7575 | 0.00% | 5762 | 5673 | -1.54% | | Round 4 | 107352 | 107351 | 0.00% | 2747 | 2747 | 0.00% | 1732 | 1717 | -0.87% |</code></pre> <p> </p> <p>---------------------------------------------------------------------------------------------------------------------------------------<br> DBpedia 2016-10 extra resources: (Original dataset http://downloads.dbpedia.org/2016-10/)</p> <p>---------------------------------------------------------------------------------------------------------------------------------------</p> <p>File: _dbpedia_classes_2016-10.csv</p> <p>Information: DBpedia classes and parents: (We remove the abstract types: Agent, Thing)</p> <p>Total: 759 classes</p> <p>Structure: [class, parents (separate with space)] (without prefix dbo: or http://dbpedia.org/ontology/)</p> <p>Example: "City","Location Place PopulatedPlace Settlement"</p> <p>---------------------------------------------------------------------------------------------------------------------------------------</p> <p>File: _dbpedia_properties_2016-10.csv</p> <p>Information: DBpedia properties and these equivalents</p> <p>Total: 2865 properties</p> <p>Structure: [property, it’s equivalent properties] (without prefix dbo: or http://dbpedia.org/ontology/)</p> <p>Example: "restingDate","deathDate"</p> <p>---------------------------------------------------------------------------------------------------------------------------------------</p> <p>File: _dbpedia_domains_2016-10.csv</p> <p>Information: DBpedia properties and these domain types</p> <p>Total: 2421 properties (have types as their domain)</p> <p>Structure: [property, type (domain)] (without prefix dbo: or http://dbpedia.org/ontology/)</p> <p>Example: "deathDate","Person"</p> <p>---------------------------------------------------------------------------------------------------------------------------------------</p> <p>File: _dbpedia_entities_2016-10.jsonl.bz2 </p> <p>Information: DBpedia entity dump</p> <p>Format: json list bz2 (bz2 Compressed json list)</p> <p>Source: DBpedia dump 2016-10 core</p> <p>Total: 5,289,577 entities (No disambiguation entities)</p> <p>Structure:</p> <p>An entity: for example “Tokyo”: (datatype: dictionary),</p> <p>{</p> <p>'wd': 'Q1322032', (Wikidata ID, datatype: string)</p> <p>'wp': 'Tokyo', (Wikipedia ID, add prefix <a href="https://en.wikipedia.org/wiki/">https://en.wikipedia.org/wiki/</a> + wp to get the Wikipedia URL, datatype: string)</p> <p>'dp': 'Tokyo', (DBpedia ID, add prefix <a href="http://dbpedia.org/resource/">http://dbpedia.org/resource/</a> + dp to get the DBpedia URL, datatype: string)</p> <p>'label': 'Tokyo', (Entity label, datatype: string)</p> <p>'aliases': ['To-kyo', 'Tôkyô Prefecture', ..], (Other entity names, datatype: list) </p> <p>'aliases_multilingual': ['东京小子', 'طوكيو', ...], (Other entity names in multilingual, datatype: list)</p> <p>'types_specific': 'City', (Entity direct type, datatype: string) </p> <p>'types_transitive': ['Human settlement', 'City', 'PopulatedPlace', 'Location', 'Place', 'Settlement'], (Entity transitive types, datatype: list)</p> <p>'claims_entity': { (entity statements, datatype: dictionary. Keys: properties, Values: list of tail entities)</p> <p>'governingBody': ['Tokyo Metropolitan Government'], </p> <p> 'subdivision': ['Honshu', 'Kantō region'],</p> <p>...</p> <p>},</p> <p>'claims_literal': {</p> <p>'string': { (String literal: datatype: dictionary. Keys: properties, Values: list of values</p> <p>'postalCode': ['JP-13'], </p> <p>'utcOffset': ['+09:00', '+9'],</p> <p>…</p> <p>}</p> <p>'time': { (Time literal: datatype: dictionary. Keys: properties, Values: list of date time</p> <p>'populationAsOf': ['2016-07-31'], </p> <p>...</p> <p>}), </p> <p>'quantity': { (Numerical literal: datatype: dictionary. Keys: properties, Values: list of values</p> <p>populationDesity: [6224.66, 6349.0], </p> <p>'maximumElevation': [2017], </p> <p>...</p> <p>},</p> <p>'pagerank': 2.2167366040153352e-06 (Entity page rank score calculated on DBpedia Graph)</p> <p>}</p> <p>---------------------------------------------------------------------------------------------------------------------------------------</p> <p>THIS DATA IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.</p>
Dataset: Reinforcing Cybersecurity Hands-on Training With Adaptive Learning
<p>This repository contains supplementary materials for the following conference paper:<br> <br> Pavel Seda, Jan Vykopal, Valdemar Švábenský, Pavel Čeleda.<em><br> Reinforcing Cybersecurity Hands-on Training With Adaptive Learning. </em><br> In Proceedings of the 51st IEEE Frontiers in Education Conference (FIE 2021).<br> <a href="https://doi.org/10.1109/FIE49875.2021.9637252">https://doi.org/10.1109/FIE49875.2021.9637252</a><br> <br> Preprint available at: <a href="https://arxiv.org/abs/2201.01574">https://arxiv.org/abs/2201.01574</a></p> <p><strong>How to cite</strong></p> <p>If you use or build upon the materials, please use the BibTeX entry below to cite the original paper (not only this web link).</p> <p>Some of the linked repositories have their separate citation entry; please use that one as well, if possible.</p> <pre><code>@inproceedings{Seda2021reinforcing, author = {Seda, Pavel and Vykopal, Jan and \v{S}v\'{a}bensk\'{y}, Valdemar and \v{C}eleda, Pavel}, title = {{Reinforcing Cybersecurity Hands-on Training With Adaptive Learning}}, booktitle = {Proceedings of the 51st IEEE Frontiers in Education Conference}, series = {FIE '21}, location = {Lincoln, NE, USA}, publisher = {IEEE}, address = {New York, NY, USA}, month = {10}, year = {2021}, pages = {1--9}, numpages = {9}, isbn = {978-1-6654-3851-3}, url = {https://doi.org/10.1109/FIE49875.2021.9637252}, doi = {10.1109/FIE49875.2021.9637252}, }</code></pre> <p> </p>
Adaptive Introgression in Modern Human Circadian Rhythm Genes Datasets
<p><strong>README:</strong></p> <p>Modern human genetic data with evidence of adaptive introgression from Neanderthals or Denisovans within circadian rhythm genes. The data was generated from the phased gnomAD 1KGP + HGDP callset (Koenig <em>et al</em>., 2024) and introgressed segments were identified by SPrime (Browning <em>et al</em>., 2018). Genes of interest were downloaded from the Circadian Genome Database (CGDB) (Li <em>et al</em>., 2017). Additional variants, haplotypes, and genes that have been previously reported to influence circadian rhythm or chronotype that are thought to be derived from Neanderthals and Denisovans were compiled from Dannemann & Kelso (2017), McArthur et al. (2021), Dannemann et al. (2022), and Velazquez-Arcelay et al. (2023).</p> <p><strong>SPrime ND_Match Files</strong></p> <p>Raw SPrime identified files that we used for our entire analysis. These were modified to include the archaic allele, archaic allele frequency, and average introgressed segment allele frequency. Note that these have been lifted over (Hinrichs <em>et</em> <em>al</em>., 2006) from GRCh38 (hg38) to GRCh37 (hg19) coordinates to match the genome builds of the archaic samples used in our study. As such, any manually generated variant IDs (chromosome:position:ReferenceAllele_AlternativeAllele naming convention) may no longer match the position they are currently sitting on as they were generated with hg38 coordinates. However, all of these were subsequently filtered out of our final results and any proper SNP IDs (dbSNP labels) will be accurate.</p> <p><strong>Supplementary Tables</strong></p> <p>All supplementary tables have an associated README as the first sheet that explains in detail the contents.</p> <p><strong>NEXUS Files</strong></p> <p>NEXUS files were used to generate haplotype networks in PopArt (Leigh & Bryant, 2015). There is a larger, master haplotype file and a smaller subset file. The larger file contains 668 haplotypes from all populations generated in the phased gnomAD 1KGP + HGDP callset (Koenig <em>et al</em>., 2024) for the <em>SUSD1 </em>core haplotype. The smaller subset file is the top 50 haplotypes and ties based on frequency, all Oceanic haplotypes with frequencies of at least 2, and the Neanderthal and Denisovan haplotypes for <em>SUSD1</em>. </p> <p><strong>TRAITS file</strong></p> <p>Accompanies the NEXUS files to create pie graphs for the haplotype network and contains frequency counts of number of haplotypes per region.</p>
Energy-Dependent, Self-Adaptive Mesh h(p)-Refinement of a Constraint-Based Continuous Bubnov-Galerkin Isogeometric Analysis Spatial Discretisation of the Multi-Group Neutron Diffusion Equation with Dual-Weighted Residual Error Measures
<p>This repository holds all of the raw data generated by my (Modern) Fortran code for a paper "Energy-Dependent, Self-Adaptive Mesh h(p)-Refinement of a Constraint-Based Continuous Bubnov-Galerkin Isogeometric Analysis Spatial Discretisation of the Multi-Group Neutron Diffusion Equation with Dual-Weighted Residual Error Measures".</p><p>The (Modern) Fortran code solves the multi-group neutron diffusion equation using a novel IGA-based spatial discretisations.</p>
Energy-Dependent, Self-Adaptive Mesh h(p)-Refinement of an Interior-Penalty Scheme for a Discontinuous Galerkin Isogeometric Analysis Spatial Discretisation of the Multi-Group Neutron Diffusion Equation with Dual-Weighted Residual Error Measures
<p>This repository holds all of the raw data generated by my (Modern) Fortran code for a paper "Energy-Dependent, Self-Adaptive Mesh h(p)-Refinement of an Interior-Penalty Scheme for a Discontinuous Galerkin Isogeometric Analysis Spatial Discretisation of the Multi-Group Neutron Diffusion Equation with Dual-Weighted Residual Error Measures".</p><p>The (Modern) Fortran code solves the multi-group neutron diffusion equation using a novel IGA-based spatial discretisations.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.