Find research datasets worth reusing
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100
datasets available to search
ShareScore release 0.9.0
Dataset results
100 results for “DNA shape”
p53 shapes genome-wide changes in small non-coding RNA expression during the human DNA damage response
GEO Series GSE50064. Homo sapiens. 18 samples. Type: Non-coding RNA profiling by high throughput sequencing.
A common set of DNA regulatory elements shapes Drosophila appendages
GEO Series GSE38727. Drosophila melanogaster. 22 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Intrinsically Disordered Regions in Chromodomain Helicase DNA-binding (CHD) Proteins Shape Distinct Protein Interaction Networks
GEO Series GSE275475. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Diurnal control of H3K27me1 deposition shapes expression of a subset of cell cycle and DNA damage response genes
GEO Series GSE261764. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Synergistic DNA and RNA binding of the Hox transcription factor Ultrabithorax coordinates splicing and shapes in vivo homeotic functions
GEO Series GSE296189. Drosophila melanogaster. 15 samples. Type: Expression profiling by high throughput sequencing.
Genomic regions flanking E-box sites influence DNA binding specificity of bHLH transcription factors through DNA shape (validation)
GEO Series GSE44437. Saccharomyces cerevisiae. 2 samples. Type: Protein profiling by protein array.
DNA-guided transcription factor cooperativity shapes face and limb mesenchyme [ATAC-seq]
GEO Series GSE230315. Homo sapiens. 78 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Global Genome Repair factors are essential for shaping the DNA methylation landscape in Arabidopsis [small RNA-seq]
GEO Series GSE76649. Arabidopsis thaliana. 3 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression
GEO Series GSE123373. Mus musculus. 116 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
DNA-guided transcription factor cooperativity shapes face and limb mesenchyme [ChIP-seq]
GEO Series GSE230316. Homo sapiens; Mus musculus. 200 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNA replication initiation shapes the mutational landscape and expression of the human genome
GEO Series GSE202799. Homo sapiens. 27 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
DNMT3A-dependent DNA methylation shapes the endothelial enhancer landscape [RNA-seq]
GEO Series GSE281342. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
DNA replication initiation shapes the mutational landscape and expression of the human genome (INDUCE-Seq)
GEO Series GSE202797. Homo sapiens. 2 samples. Type: Other.
Biased transcription and selective degradation of small RNAs shape the pattern of DNA elimination in Tetrahymena
GEO Series GSE38768. Tetrahymena thermophila. 13 samples. Type: Non-coding RNA profiling by high throughput sequencing; Other.
MTF2 recruits Polycomb Repressive Complex 2 by helical shape-selective DNA binding
GEO Series GSE94300. Mus musculus. 22 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression (ChIP-Seq)
GEO Series GSE123371. Mus musculus. 62 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Quantitative modeling of transcription factor binding specificities using DNA shape
GEO Series GSE60200. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNMT3A-dependent DNA methylation shapes the endothelial enhancer landscape
GEO Series GSE295387. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression (Bisulfite-Seq)
GEO Series GSE138613. Mus musculus. 12 samples. Type: Methylation profiling by high throughput sequencing.
DNMT3A-dependent DNA methylation shapes the endothelial enhancer landscape [WGBS II]
GEO Series GSE281950. Mus musculus. 6 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.