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206
datasets available to search
ShareScore release 0.9.0
Dataset results
206 results for “FFPE”
A cross-comparison of technologies for the detection of microRNAs from FFPE samples of hepatoblastoma patients [sequencing]
GEO Series GSE62010. Homo sapiens. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Extraction-Free Whole Transcriptome Profiling from Specific Subareas of Unstained or H&E Stained FFPE Tissues
GEO Series GSE119630. Homo sapiens; Mus musculus; Rattus norvegicus. 155 samples. Type: Expression profiling by high throughput sequencing.
Whole genome expression data from formalin-fixed parrafin embedded (FFPE) primary and metastatic melanomas
GEO Series GSE59455. Homo sapiens. 141 samples. Type: Expression profiling by array.
Three commercial array platforms compared for DNA copy number detection with DNA isolated from FFPE tissue
GEO Series GSE30123. Homo sapiens. 22 samples. Type: Genome variation profiling by genome tiling array.
Gene expression profiling of FFPE kidney cancer samples
GEO Series GSE180925. Homo sapiens. 22 samples. Type: Expression profiling by array.
Evaluating the gene expression of frozen tissue-derived prognostic signatures in FFPE colorectal cancer samples
GEO Series GSE78248. Homo sapiens. 42 samples. Type: Expression profiling by array.
mRNA profiles in formalin-fixed and paraffin embedded (FFPE) breast cancer tissues
GEO Series GSE72205. Homo sapiens. 42 samples. Type: Expression profiling by array.
Formalin-fixed, paraffin-embedded (FFPE) tissue epigenomics using Infinium HumanMethylation450 BeadChip assays (HM 450K).
GEO Series GSE66555. Homo sapiens. 65 samples. Type: Methylation profiling by array.
Adaptive Biotechnologies TCRbeta sequencing of 174 primary and 42 metastatic pancreatic ductal adenocarcinoma tumor samples from FFPE curls and 215 matched blood plus 73 additional blood samples
GEO Series GSE281005. Homo sapiens. 505 samples. Type: Other.
Comparison of miRNA expression between primary tissue, patient-derived cancer model, and FFPE tissue
GEO Series GSE212812. Homo sapiens. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Comparison of Nanostring nCounter data on FFPE colon cancer samples and Affymetrix microarray data on matched frozen tissues
GEO Series GSE62932. Homo sapiens. 68 samples. Type: Expression profiling by array.
GeoMx Cancer Transcriptome Atlas (CTA) mRNA assay on an FFPE cell pellet array of mixed HEK293T and CCRF-CEM cell lines.
GEO Series GSE174746. Homo sapiens. 56 samples. Type: Expression profiling by high throughput sequencing; Other.
Microarray data generated from formalin-fixed, paraffin-embedded (FFPE) uninvolved small bowel (SB) ileal tissue.
GEO Series GSE120782. Homo sapiens. 314 samples. Type: Expression profiling by array.
An FFPE-based prognostic signature to predict metastasis in stage I/II microsatellite stable colorectal cancer
GEO Series GSE81986. Homo sapiens. 573 samples. Type: Expression profiling by array.
Developing biomarkers incorporating high throughput RNA, DNA, small RNA sequencing and protein expression in Inflammatory Bowel Disease using formalin-fixed, paraffin-embedded (FFPE) tissue samples
GEO Series GSE221161. Homo sapiens. 203 samples. Type: Expression profiling by high throughput sequencing.
450k Analysis of 42 FFPE HPV+ and HPV- HNSCC samples
GEO Series GSE38266. Homo sapiens. 42 samples. Type: Methylation profiling by array.
Epigenome analysis of formalin-fixed paraffin-embedded (FFPE) meningioma samples
GEO Series GSE200321. Homo sapiens. 64 samples. Type: Methylation profiling by genome tiling array.
Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data
GEO Series GSE308148. Homo sapiens. 8 samples. Type: Other.
Spatial transcriptomic profiling of FFPE and frozen colorectal cancer tissues
GEO Series GSE310215. Homo sapiens. 36 samples. Type: Other.
RNA profiling from prostate FFPE specimens (Nanostring)
GEO Series GSE55055. Homo sapiens. 24 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.